Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I17
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 121 8e-28
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 118 4e-27
11_04_0146 - 14091671-14092357,14092996-14093229 31 1.1
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 28 7.5
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 28 9.9
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 121 bits (291), Expect = 8e-28
Identities = 86/228 (37%), Positives = 108/228 (47%)
Frame = -2
Query: 797 QMKLLKQGQKKAHIMESXXTGVPXXTK*NGPENILEKPIPVDSVFAXR*ND*LHWCHQGQ 618
+MK LKQ KKAH+ME G K + EK IPVD+VF + +G+
Sbjct: 170 KMKGLKQ--KKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
Query: 617 KDTKVSLLVGTQRSYPVRHTRVLGKLPALELGILXGCRSXXXXXXXXXXXXXLKWTRKSI 438
V G R P + R L K+ + G R +
Sbjct: 228 GYEGVVTRWGVTR-LPRKTHRGLRKVACI--GAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 437 VLXQGIHXKDGXVIXNXAFTEYXLFEKSITPMGGFPHYGEVNXDFVMXKGCCMGPXKRVI 258
V G ++ + A TE+ EK ITPMGGFPHYG V D++M KGCC+GP KRV+
Sbjct: 285 VYKIGKSGQES----HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVV 340
Query: 257 XFRKXLXVHTKRAAXEKINLKFIDIXSKFGHGRFQTPADKAAXMGTXK 114
R+ L T R A E+I LKFID SKFGHGRFQT +K G K
Sbjct: 341 TLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 117 bits (281), Expect = 1e-26
Identities = 55/102 (53%), Positives = 69/102 (67%)
Frame = -1
Query: 735 GTXXDKVKWAREHSGETYPCRFCVCPKMK*LTALVSPRAKGYXGVTSRWHTKKLPRKTHK 556
GT DKV + + + P V K + + + + KGY GV +RW +LPRKTH+
Sbjct: 189 GTIADKVDYGYKFFEKEIPVD-AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
Query: 555 GXRKVACIGAWHPXRVSFTVARAGQKGYXHRTEMDKKIYRIG 430
G RKVACIGAWHP RVS+TVARAGQ GY HRTEM+KK+Y+IG
Sbjct: 248 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 118 bits (285), Expect = 4e-27
Identities = 84/220 (38%), Positives = 106/220 (48%)
Frame = -2
Query: 797 QMKLLKQGQKKAHIMESXXTGVPXXTK*NGPENILEKPIPVDSVFAXR*ND*LHWCHQGQ 618
+MK LKQ KKAH+ME G K + EK IPVD+VF + +G+
Sbjct: 170 KMKGLKQ--KKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
Query: 617 KDTKVSLLVGTQRSYPVRHTRVLGKLPALELGILXGCRSXXXXXXXXXXXXXLKWTRKSI 438
V G R P + R L K+ + G R +
Sbjct: 228 GYEGVVTRWGVTR-LPRKTHRGLRKVACI--GAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 437 VLXQGIHXKDGXVIXNXAFTEYXLFEKSITPMGGFPHYGEVNXDFVMXKGCCMGPXKRVI 258
V G ++ + A TE+ EK ITPMGGFPHYG V D++M KGCC+GP KRV+
Sbjct: 285 VYKIGKSGQES----HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVV 340
Query: 257 XFRKXLXVHTKRAAXEKINLKFIDIXSKFGHGRFQTPADK 138
R+ L T R A E+I LKFID SKFGHGRFQT +K
Sbjct: 341 TLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 117 bits (281), Expect = 1e-26
Identities = 55/102 (53%), Positives = 69/102 (67%)
Frame = -1
Query: 735 GTXXDKVKWAREHSGETYPCRFCVCPKMK*LTALVSPRAKGYXGVTSRWHTKKLPRKTHK 556
GT DKV + + + P V K + + + + KGY GV +RW +LPRKTH+
Sbjct: 189 GTIADKVDYGYKFFEKEIPVD-AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
Query: 555 GXRKVACIGAWHPXRVSFTVARAGQKGYXHRTEMDKKIYRIG 430
G RKVACIGAWHP RVS+TVARAGQ GY HRTEM+KK+Y+IG
Sbjct: 248 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 621 AKGYXGVTSRWHTKKLPRKTHKGXRKVACIGAW 523
AK Y T RWH K++ K K KV +W
Sbjct: 265 AKIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 621 AKGYXGVTSRWHTKKLPRKTHKGXRKV 541
AK Y T RWH K++ K K KV
Sbjct: 28 AKIYKDKTKRWHDKRIKHKEFKAREKV 54
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 350 TPMGGFPHYGEVNXDFVMXKGCCMG 276
+P+GG P YG ++ D + C +G
Sbjct: 1378 SPIGGIPRYGRLSGDVYVCNQCTIG 1402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,727,659
Number of Sequences: 37544
Number of extensions: 293342
Number of successful extensions: 515
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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