Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I11
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 34 0.11
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 33 0.20
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 32 0.61
01_05_0556 + 23236156-23236364,23236623-23236689,23236903-232371... 31 1.1
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 1.4
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 30 2.5
02_02_0691 + 12999452-12999820 30 2.5
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 3.3
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 29 4.3
01_06_1293 - 36050847-36051304,36052343-36052826 29 4.3
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 5.7
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.7
11_06_0610 - 25449085-25453284 28 7.5
12_01_0302 - 2286171-2286341,2286747-2286968 28 9.9
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 28 9.9
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.9
02_01_0302 - 2021221-2023305 28 9.9
01_07_0147 - 41474003-41474308,41474706-41474750 28 9.9
01_07_0143 - 41443030-41443335,41443733-41443777 28 9.9
01_01_0046 - 331758-332627 28 9.9
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -1
Query: 708 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 538
P SP+ S TS + S ++PT+P TS +P +P +P P PS
Sbjct: 1761 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHA 1820
Query: 537 LTPSSLGMXKGVSPPY 490
+PSS SP Y
Sbjct: 1821 YSPSSPNYYSSTSPTY 1836
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = -1
Query: 708 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 538
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758
Query: 537 LTPSS--LGMXKGVSPPY 490
+PSS L SP Y
Sbjct: 1759 YSPSSPRLSPYSQTSPNY 1776
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -1
Query: 714 IKPPSPAISXTSTR-SSNPR--FHTPTTPDLTSISINPLTP 601
I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>01_05_0556 +
23236156-23236364,23236623-23236689,23236903-23237108,
23237284-23237510,23237865-23237926
Length = 256
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 172 LHLFKLLSLPPRSTAGW*ILAMFL 101
L+LF +L PR+T GW ++A FL
Sbjct: 41 LYLFDFATLTPRTTTGWCVIAAFL 64
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 696 AISXTSTRSSNPRFHTPTTP 637
A S T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = -1
Query: 732 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 553
+ SP+ + P ++S T S+ R P + S P TP A L PP S
Sbjct: 150 SASPIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTP---PSAKTLTPPRRSP 206
Query: 552 APSAYLTP 529
+P++ LTP
Sbjct: 207 SPASTLTP 214
>02_02_0691 + 12999452-12999820
Length = 122
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/80 (32%), Positives = 29/80 (36%)
Frame = +2
Query: 494 GGETPLXMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWNRGFDD 673
G E P+ P G R A G+ G P A G RG E +S G
Sbjct: 11 GSEAPVVAPKPRGWRMAVGSIGGGGISPPVARG---GRRGERERGRRSA-----GGGLTG 62
Query: 674 RVDVXEIAGEGGLMHKGETA 733
VD AGE G H G A
Sbjct: 63 AVDAFRPAGEAGRQHAGAAA 82
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -1
Query: 708 PPSPAISXTSTRSSNPRFHTPT---TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 538
PPSP+I + T +TPT TP S +P TP + P + +PS+
Sbjct: 105 PPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPG-GGCSSSPTPCDAPPSPSSD 163
Query: 537 LTPSSLGMXKGVSP 496
+P++ G G SP
Sbjct: 164 TSPTTPGGGGGYSP 177
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 726 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPD 634
SP + P +PA S +S SS+P TP + D
Sbjct: 326 SPQSVVPSNPAASSSSVASSSPALATPESRD 356
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 735 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKP 568
LA++P + PP P + T+T + N TP ++ N + Y ++ P L P
Sbjct: 135 LAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNNASYYPQQQTPLLYP 190
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/96 (26%), Positives = 38/96 (39%)
Frame = -1
Query: 732 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 553
A++ + PPSP +PR H P+ P L S P P +P +PPL +
Sbjct: 562 AMTAAALAPPSPP------EPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTP 610
Query: 552 APSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISR 445
P S +PP Q + + S L+ +
Sbjct: 611 QPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQ 646
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 242 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRRLVDPRHVSSDSFGVYVKS*SL 63
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 62 ILHSF 48
+LHSF
Sbjct: 1408 LLHSF 1412
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 708 PPSPAISXTSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSE 553
PP+P +S P HTP+ P+ T S +P TP K +P PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 83 RLQRSRKKHGEDLPTGGRSRRKGEKLE 163
RL+R RK + D+ G + +GEKLE
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLE 83
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 247 QLLPSIPYCTTTSGRFLRTTKLPFSLHLFKLLSL 146
+L+P+ P+ S F+ K+ F L LF+L +L
Sbjct: 293 RLIPTEPWVGAVSWAFVSLPKIKFELSLFRLFNL 326
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 443 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 354
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 9.9
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = -1
Query: 705 PSPAISXTSTRSSNPRFHTPTTPDLTS--ISINPLTPY*KE-----FA--PGLKPPLSSE 553
PSP S T+ S +P TPT P S ++ P P + FA PG P+ S
Sbjct: 519 PSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPST 578
Query: 552 APSAYLTPSSLGMXKGVSPP 493
PS+ PS G PP
Sbjct: 579 PPSSGSPPSP---SSGYQPP 595
>01_07_0147 - 41474003-41474308,41474706-41474750
Length = 116
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 90 KGVGRNMARIYQPAVDLGGRERSLNRCREK-GSFVVLKNRPDVVVQYGIEGRS*KVARGI 266
+G G A + P + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 267 ED 272
ED
Sbjct: 103 ED 104
>01_07_0143 - 41443030-41443335,41443733-41443777
Length = 116
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 90 KGVGRNMARIYQPAVDLGGRERSLNRCREK-GSFVVLKNRPDVVVQYGIEGRS*KVARGI 266
+G G A + P + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 267 ED 272
ED
Sbjct: 103 ED 104
>01_01_0046 - 331758-332627
Length = 289
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -2
Query: 737 YWRSRPYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPXXXXXXXXXXXXXXRCH 558
YW PY +S PP P PP + HP P+IP +
Sbjct: 13 YWF--PYWTSPPPPPPPPPPPPSSSRYRPPSPPSSRHPHPTIP-----AARAAPPLGPTN 65
Query: 557 QRLHQRISPP 528
+RLHQ+ PP
Sbjct: 66 RRLHQQPPPP 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,442,532
Number of Sequences: 37544
Number of extensions: 484781
Number of successful extensions: 1579
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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