Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I11
(801 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.072
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 35 0.072
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 32 0.39
At3g24550.1 68416.m03083 protein kinase family protein contains ... 32 0.39
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 32 0.51
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 31 0.89
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 1.2
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 1.2
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 1.2
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 30 2.1
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 2.7
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 2.7
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 29 2.7
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 29 3.6
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 29 4.7
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 4.7
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.3
At5g49080.1 68418.m06074 proline-rich extensin-like family prote... 28 6.3
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 6.3
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 28 6.3
At4g20200.1 68417.m02953 terpene synthase/cyclase family protein... 28 8.3
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 8.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 8.3
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 28 8.3
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 28 8.3
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -2
Query: 473 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIDYK-VKIADNNLVTHKELALKV 300
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 299 SSIIGTRVYVFDPSC 255
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -1
Query: 681 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 502
+T +S P + +P TP S S P ++AP KP + S P Y TPS K
Sbjct: 18 ATVTSYP-YSSPQTPSYNSPSYEHKGP---KYAPHPKPYVKSSPPPQYYTPSPKVNYKSP 73
Query: 501 SPPY 490
PPY
Sbjct: 74 PPPY 77
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -1
Query: 681 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 502
+T +S P + +P TP S S P ++AP KP + S P Y TPS K
Sbjct: 24 ATVTSYP-YSSPHTPAYDSPSYEHKGP---KYAPHPKPYVYSSPPPPYYTPSPKVNYKSP 79
Query: 501 SPPY 490
PPY
Sbjct: 80 PPPY 83
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 32.3 bits (70), Expect = 0.39
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Frame = -1
Query: 708 PPSPAISXTSTR-----SSNPRFHTPTTP----DLTSISINPLTPY*KEFAP-----GLK 571
PPSP + T+T SS P TP++P S S P +P P L
Sbjct: 15 PPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLT 74
Query: 570 PPLSSEAPSAYLTPS 526
PPL +PSA +TPS
Sbjct: 75 PPLPQPSPSAPITPS 89
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = -1
Query: 726 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSE 553
SP +KPP + P HTP P ++ P PY P KPP
Sbjct: 35 SPHPVKPPKHPAKPPKPPTVKPPTHTPKPP-----TVKPPPPYIPCPPPPYTPKPPTVKP 89
Query: 552 APSAYLTPSSLGMXKGVSPPY 490
P Y+ P K PPY
Sbjct: 90 PPPPYVKPPPPPTVKPPPPPY 110
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -1
Query: 708 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 538
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1680 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA 1739
Query: 537 LTPSS 523
+PS+
Sbjct: 1740 YSPSN 1744
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 708 PPSPAISXTSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSEAPSAYLT 532
P SP+ + S + S ++P+ L+ S +P +P +P P S +PS+
Sbjct: 1722 PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY 1781
Query: 531 PSSLGMXKGVSPPY 490
S G SP Y
Sbjct: 1782 SPSSPYSSGASPDY 1795
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 729 VSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 550
V P KPP+P + S + P + P TP + + +P+ P P PP+
Sbjct: 102 VQPPTYKPPTPTVKPPSVQ---PPTYKPPTPTVKPPTTSPVKP--PTTPPVQSPPVQ--- 153
Query: 549 PSAYLTPSSLGMXKGVSPP 493
P Y P+S +PP
Sbjct: 154 PPTYKPPTSPVKPPTTTPP 172
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -1
Query: 723 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 544
P+ PP+P S S P TP+ P ++ P TP P PP + P
Sbjct: 180 PVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTP----SVP--SPPDVTPTPP 233
Query: 543 AYLTPSSLGMXKGVSPPYF-QVNDESQAS 460
TP S+ G SPPY +DE +A+
Sbjct: 234 ---TPPSVPTPSG-SPPYVPPPSDEEEAA 258
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = -1
Query: 735 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 556
L+ SP P S S S S P +P++P S +PL+ +P S
Sbjct: 36 LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPS 95
Query: 555 EAPSAYLTPSS 523
AP + L+PSS
Sbjct: 96 SAPPSSLSPSS 106
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 711 KPPSPAISXTSTRS--SNPRFHTPTTPDLTSISINPLTPY*KE 589
+PP + T ++S +P FH + P+ S+ ++PL+P KE
Sbjct: 29 QPPRRTVQETLSQSPPQSPLFHPQSPPEPKSLPLSPLSPKSKE 71
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -1
Query: 762 PXLHXLAXILAVSPLCIKPPSPAISXTSTRSSNPRFHT--PTTPDLTSISINPLTP--Y* 595
P L + I + PL + PP P ++ S P F P P L I PL P
Sbjct: 322 PTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPVPGLPGIPPVPLIPGIPP 381
Query: 594 KEFAPGLKPPLS 559
PG+ PPLS
Sbjct: 382 APLIPGI-PPLS 392
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 275 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIY-RRLVDP-RH 108
+V S Y+ T PF T + N+R +K+N+ + A PS I +R+V P RH
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRIVIPNRH 67
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 446 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKEL 312
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 293 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRRLVD 117
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = -1
Query: 690 SXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMX 511
S T + S+P+ P P LTS P TP K L S+ P +P
Sbjct: 283 SETDSTESSPKEDVPPPPPLTS----PQTPSPTVSTFNTKSSLRSQPPPPPPSPEHKAPA 338
Query: 510 KGVSPPYFQVNDESQASRLISRHSTH 433
PP + ++ + + HST+
Sbjct: 339 PPPPPPMSKASESGEFCQFSKTHSTN 364
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 28.7 bits (61), Expect = 4.7
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Frame = -1
Query: 735 LAVSPLCIKPPSPAI-----SXTSTRSSNPRFHTPTTPDLTSISINPLTPY--*KEFAPG 577
LAV P+ PSP+ S ST SS P TP+TP +P +P P
Sbjct: 114 LAV-PVLAAAPSPSTPSSPPSTPSTPSSPP--STPSTPSSPPSPPSPPSPSLPPSSLPPS 170
Query: 576 LKPPLSSEAPSAYLTPSSLGMXKGVSP 496
PP + S LTP + +SP
Sbjct: 171 ASPPTNGTPDSETLTPPPAPLPPSLSP 197
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 722 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFP 618
P S PP+ S P H P +H PP H P
Sbjct: 673 PVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPP 707
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 722 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFP 618
P S PP+ S P H P +H PP H P
Sbjct: 755 PVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPP 789
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 732 AVSPLCIKPPSPAISXTST-RSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 556
A +P +PP ++S +SS+P HTP + S +P TP +P P S
Sbjct: 163 ASAPSKSQPPRSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSP--SPVSHS 220
Query: 555 EAPSAYLTPS 526
+ S TPS
Sbjct: 221 PSHSPAHTPS 230
>At5g49080.1 68418.m06074 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 609
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -1
Query: 681 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 502
+T +S P + +P TP S +P ++ P KP + + P Y +PS K
Sbjct: 18 ATVTSYP-YSSPQTPQYNFPSHQHKSP---KYTPHSKPYIYNSPPPPYYSPSPKVNYKSP 73
Query: 501 SPPY 490
PPY
Sbjct: 74 PPPY 77
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 723 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 544
P PP PAI T S P TP P T+ P P P L PP ++ P
Sbjct: 108 PAITPPPPPAI--TPPLSPPPPAITPPPPLATTPPALPPKP----LPPPLSPPQTTPPPP 161
Query: 543 AYLTP 529
+TP
Sbjct: 162 PAITP 166
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 719 YASSHPPLRSRXHQPDHQIPDSIHQPPQT 633
Y SS P +RS H P + P + PP T
Sbjct: 441 YVSSFPFIRSPSHSPQYASPAAYPSPPTT 469
>At4g20200.1 68417.m02953 terpene synthase/cyclase family protein
5-epi-aristolochene synthase, Nicotiana tabacum,
PATX:G505588
Length = 604
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 138 LGGRERSLNRCREKGSFVVLKNRPDVVVQYGIEGRS*KVARGIEDVDSGAY 290
L G S+ + K +F LK+RP +V I+GR G ED S Y
Sbjct: 464 LAGIFMSMGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGY 514
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 722 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFP 618
P S PP+ S P H P +H PP H P
Sbjct: 576 PVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPP 610
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -1
Query: 708 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS--AYL 535
PPS +S S R++ P P++ S+ P P E+ P PP S +PS AY
Sbjct: 473 PPSSKMSP-SFRATPP---PPSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYP 528
Query: 534 TPSSLGMXKGVSPP 493
P L PP
Sbjct: 529 PPPPLSPPPPSPPP 542
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -2
Query: 551 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 387
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 386 MATNQAIIDY 357
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -2
Query: 551 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 387
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 386 MATNQAIIDY 357
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,486
Number of Sequences: 28952
Number of extensions: 367095
Number of successful extensions: 1367
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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