Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I09
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 99 3e-22
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 33 0.043
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 33 0.057
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 32 0.076
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 28 1.2
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 28 1.2
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 28 1.6
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 2.9
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 3.8
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 26 5.0
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.7
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 99 bits (238), Expect = 3e-22
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Frame = -1
Query: 588 PVSNAPKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGS------IMSKL 427
P + K E++ ++FA GY+AGV CAI+SHPAD +VSKLN +K A G+ I ++
Sbjct: 211 PKNMYSKAEKIGISFAGGYMAGVLCAIISHPADVMVSKLNSNKKAGEGAGAAAARIYKEI 270
Query: 426 GWAGVWKGLGPRIVMIGTLTALQWFIYDA 340
G++G+W GLG RIVMIGTLT QW IYD+
Sbjct: 271 GFSGLWNGLGVRIVMIGTLTGAQWLIYDS 299
Score = 71.7 bits (168), Expect = 1e-13
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = -3
Query: 742 EAWPKMVKNEGTARSXKGLVPLWGRQIPYTMMKFACFERTLELLYQYVVPKPR 584
EAW K+V NEG +GL PLW RQIPYTMMKFA FER +E LY Y + KP+
Sbjct: 161 EAWSKIVTNEGFGTLYRGLAPLWFRQIPYTMMKFASFERIVEALYTY-IGKPK 212
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.1 bits (72), Expect = 0.043
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Frame = -1
Query: 582 SNAPKGEQL--VVTFAAGYIAGVFCAIVSHPADTVVSKLN--------QDKTATVGSIMS 433
S P E+L V TF G +AG+ + P DTV S++ ++ I++
Sbjct: 193 SRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRMQSLSASKEYKNSIHCAYKILT 252
Query: 432 KLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 337
+ G W G PR+ + + + +Y+ V
Sbjct: 253 QDGLLRFWSGATPRLARLILSGGIVFTVYEKV 284
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.7 bits (71), Expect = 0.057
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = -1
Query: 552 VTFAAGYIAGVFCAIVSHPADTVVSKL-NQDKT----ATVGSIMSKLGWAGVWKGLGPRI 388
V F G AG+F + S+P DT+ +K + KT I ++ G G + GL +
Sbjct: 106 VNFLCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATKKIYAEAGIKGFFPGLKFSV 165
Query: 387 VMIGTLTALQWFIYDAVQGL 328
+ IG + Y A + +
Sbjct: 166 IQIGPYAGCFFMFYRASEAV 185
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 32.3 bits (70), Expect = 0.076
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = -1
Query: 540 AGYIAGVFCAIVSHPADTVVSKL--NQDKTA---TVGSIMSKLGWAGVWKGLGPRIVMIG 376
+G IAG A ++ P D V +++ +Q + + T+ SI++ G+ ++KG+ PR++ +
Sbjct: 264 SGSIAGGIAAALTTPFDVVKTRIMTSQQRLSYVFTIKSIVAHEGFLALYKGIVPRVLWLS 323
Query: 375 TLTALQWFIYDAV 337
A+ YD +
Sbjct: 324 GGGAIFLGCYDVI 336
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -1
Query: 450 VGSIMSKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 337
+G + G G+++G GPRI + ++L + Y+ +
Sbjct: 288 LGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGI 325
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = -1
Query: 552 VTFAAGYIAGVFCAIVSHPADTVVSKL-----NQDKTAT---VGSIMSKLGWAGVWKGLG 397
VTFAAG +AG+ + +P D V +++ D T + I+ G +++G+
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGIL 69
Query: 396 PRIVMIGTLTALQWFIYDAVQGL 328
P I+M AL++ D L
Sbjct: 70 PPILMEAPKRALKFASNDTYSKL 92
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 730 KMVKNEGTARSXKGLVPLWGRQIPYTMMKFA 638
K+VKNEG R +G++P + P +KFA
Sbjct: 54 KIVKNEGPHRLYRGILPPILMEAPKRALKFA 84
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.9 bits (59), Expect = 1.6
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -1
Query: 426 GWAGVWKGLGPRIVMIGTLTALQWFIYD 343
G+ G++KGL P ++ + A+ + +Y+
Sbjct: 390 GFRGLYKGLSPNLLKVAPSVAISYLVYE 417
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 546 FAAGYIAGVFCAIVSHPADTVVSKLNQD 463
F AG +AG+ AI + P D V ++L D
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQSD 79
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 426 GWAGVWKGLGPRIVMIGTLTALQWFIYDA 340
G +KG+ PR+V+ TA+ W Y+A
Sbjct: 261 GIPSFFKGIRPRMVVAMPATAVSWAAYEA 289
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 39 ILTQFRIFLEIVQLLMRKDEVSNISRYIDSLNN 137
I +QF FL+I+ L +RK + + RY +NN
Sbjct: 675 IFSQFTTFLDIIDLHLRKAGIGFV-RYDGRMNN 706
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 120 IDSLNNSRVVLKLNNK*FAGNVSRSVFVHR 209
++++NNSR L K F+ +S S F+HR
Sbjct: 177 LENVNNSRQDQFLPYKTFSSTISNSDFLHR 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,979,744
Number of Sequences: 5004
Number of extensions: 57881
Number of successful extensions: 179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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