Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I09
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 45 8e-05
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 41 0.001
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_35991| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.0
SB_13193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.0
SB_43400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_15839| Best HMM Match : CDO_I (HMM E-Value=6.6) 29 4.0
SB_25593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 29 5.3
SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015) 29 5.3
SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_39545| Best HMM Match : TolA (HMM E-Value=0.12) 28 7.0
SB_47110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 28 9.3
SB_11510| Best HMM Match : MGDG_synth (HMM E-Value=5.3) 28 9.3
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 9.3
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 28 9.3
SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25) 28 9.3
SB_14513| Best HMM Match : rve (HMM E-Value=0.14) 28 9.3
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Frame = -1
Query: 546 FAAGYIAGVFCAIVSHPADTVVSKLNQD------KTATVGSIMSKLGWAGVWKGLGPRIV 385
F G +AG ++V+ PAD V ++L + A V +I+ G G+++GL PR V
Sbjct: 527 FICGIMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTV 586
Query: 384 MIGTLTALQWFIYDAV 337
++A+ W IY+ V
Sbjct: 587 RRTLMSAMAWTIYEEV 602
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Frame = -1
Query: 591 SPVSNAPKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLN-QD-KTATVGS---IMSKL 427
+PV N Q + F +G AGV +HP D V ++L QD T ++ + I+S L
Sbjct: 17 TPVDNDKNPHQPLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSAL 76
Query: 426 -------GWAGVWKGLGPRIVMIGTLTALQWFIYDAVQGLAEDAQASA 304
G G++KGL P +V I +Q +YD ++ A D+ +A
Sbjct: 77 RRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQSVYDIMKLRALDSAFAA 124
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 537 GYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIMSKLGWAGV-WKGLGPRIVMIG-TLTA 364
G IAG+ V HP D V ++ D+ + + L + WK GPR + G T +
Sbjct: 133 GAIAGMIAQTVVHPLDVVRRQMQVDRGRSGSITQTSLSALKILWKQGGPRRIYAGLTASY 192
Query: 363 LQWFIYDAVQGLAEDAQA 310
L+ A L DA A
Sbjct: 193 LKVMPAAATSLLVRDALA 210
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = -1
Query: 561 QLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDK----TATVGS---IMSKLGWAGVWKG 403
+++ AA G+ V+ P + V + D + T+G+ I G G+WKG
Sbjct: 123 KILKKIAASITTGIMAVSVAQPTEVVKIRFQADAGRYTSGTMGTYAEIARNEGMKGLWKG 182
Query: 402 LGPRIVMIGTLTALQWFIYDAVQGL 328
+ P + + T+ + +YD+++GL
Sbjct: 183 VFPNMARLCTVNVTELVVYDSIKGL 207
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 453 TVGSIMSKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVQGLAED 319
T+G+++ + GW G++ GLG ++ TA+ +F Y+ V + D
Sbjct: 978 TLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMFFTYEGVVYILRD 1022
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 32.3 bits (70), Expect = 0.43
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Frame = -1
Query: 549 TFAAGYIAGVFCAIVSH-PADTVVSKLNQDKT----------ATVGSIMSKLGWAGVWKG 403
T A+G AGV A+V P +T+ K D+T + V +I+ G+ GV+KG
Sbjct: 139 TLASGLGAGVSEAVVVVCPMETIKVKFIHDQTQPNPKYKGFFSGVRTILKTEGFFGVYKG 198
Query: 402 LGPRIVMIGTLTALQWFIYDAVQGLAEDAQAS 307
L ++ G+ +++F+Y ++ + +S
Sbjct: 199 LTATVIKQGSNQMIRFFVYSNLKSWLQGGDSS 230
>SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 473 SLDTTVSAGWETIAQN-TPAM*PAANVTTS 559
SL+ T S+ +ETIA N TP + P+ N TTS
Sbjct: 507 SLNETTSSAYETIAVNATPTISPSPNGTTS 536
>SB_35991| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 669
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 291 WHRGWRRPGHPQPDL 335
W RG R P HP+PDL
Sbjct: 422 WRRGSRAPNHPRPDL 436
>SB_13193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 442 RADGRGLVLVEFGHNRIGWVGDD-SAEHTGNVTSC--KRHHQLFTLGCIAHG 588
R G+ V+F + R+ WVGDD S ++ G T+C +R + L L +HG
Sbjct: 82 RKAGKKFFAVQF-YRRVVWVGDDESHQNHGFSTNCISRRRYTLGQLRVQSHG 132
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 291 WHRGWRRPGHPQPDL 335
W RG R P HP+PDL
Sbjct: 622 WRRGSRAPNHPRPDL 636
>SB_43400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 559 LFTLGCIAHGAWAQHTG-TAAQGCVRSKQTSSSCTGSVCP-XAAPGP 693
++ GC AH A A HTG AA +++ T V P AA GP
Sbjct: 31 VYPRGCQAHAAHAAHTGEIAASKMPKARGTQGGSLAQVRPFAAAKGP 77
>SB_15839| Best HMM Match : CDO_I (HMM E-Value=6.6)
Length = 313
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 559 LFTLGCIAHGAWAQHTG-TAAQGCVRSKQTSSSCTGSVCP-XAAPGP 693
++ GC AH A A HTG AA +++ T V P AA GP
Sbjct: 31 VYPRGCQAHAAHAAHTGEIAASKMPKARGTQGGSLAQVRPFAAAKGP 77
>SB_25593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 291 WHRGWRRPGHPQPDL 335
W RG R P HP+PDL
Sbjct: 486 WWRGSRAPSHPRPDL 500
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 555 VVTFAAGYIAGVFCAIVSHPADTVVSKL 472
+ F G +AG F +SHP DT+ K+
Sbjct: 251 ICMFVNGCVAGAFAHTLSHPFDTIRKKM 278
>SB_7266| Best HMM Match : UPAR_LY6 (HMM E-Value=0.015)
Length = 513
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -1
Query: 615 CCTSMLCPSPVSNAPKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQD 463
CC + LC +N P G ++++ + C+++S +T LN D
Sbjct: 92 CCDTDLCNPATTNVPSGITILLSVYIAFFCLYLCSLLSRVPETFA--LNYD 140
>SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 291 WHRGWRRPGHPQPDL 335
W RG R P HP+PDL
Sbjct: 974 WWRGSRAPSHPRPDL 988
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = -1
Query: 609 TSMLCPSPVSNAPK--GEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIM 436
TS+ CP VS+AP+ G+Q + Y + + A V+K A +G
Sbjct: 383 TSVSCPPNVSSAPQDIGQQKTTVASISYECNTSAGVPTSQASPTVAK-KPRSFAQLGIYP 441
Query: 435 SKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVQGL 328
+ LG + + R M L+A+Q +Y GL
Sbjct: 442 ASLG-SEMLDLNSTRTSMAPALSAMQTAMYGNYTGL 476
>SB_39545| Best HMM Match : TolA (HMM E-Value=0.12)
Length = 1189
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 304 HPRCQSPCGFGSKPKRPRTNEKPSLENANYTQRWTNTDLETFPANY 167
HPR CG +P P T ++ S A TQ+ +T E +Y
Sbjct: 1049 HPRKGHACGVMGRPSMPSTTKRSSYATA--TQKGNSTGRENHRESY 1092
>SB_47110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 271 SKPKRPRTNEKPSLENANYTQRWTNTDLETFPANYLLFNFNTT 143
+KPKR + KP + +A +Q T +L + PA L N TT
Sbjct: 21 AKPKRKILSSKPHVSHAESSQDSTARNLGSNPAPVRLSNLVTT 63
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 730 KMVKNEGTARSXKGLVPLWGRQIPYTMMKFACFER 626
++V+NEG KG P + R P+T++ F E+
Sbjct: 142 RIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQ 176
>SB_11510| Best HMM Match : MGDG_synth (HMM E-Value=5.3)
Length = 368
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 571 GCIAHGAWAQHTG-TAAQGCVRSKQTSSSCTGSVCPXAA 684
GC AH A A HTG +AA +++ T V P AA
Sbjct: 5 GCQAHAAHATHTGKSAASKRPKARGTQGGSLARVRPFAA 43
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 676 WGRQIPYTMMKF-ACFERTLELL---YQYVVPKPREQCTQG*TAGGDVCS 539
WG IPYTM F ACF L ++ Y +++ R Q GD+ +
Sbjct: 1489 WGSSIPYTMFIFGACFFAPLLVMFYSYYHILLAARRHARQMALKVGDIAT 1538
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Frame = -1
Query: 558 LVVTFAAGYIAGVFCAIVSHPADTVVSKLN-----QDKTATVG------SIMSKLGWAGV 412
L+ AG +AG+ ++ +P D + ++L Q + G I S G A
Sbjct: 205 LIYCLGAGCLAGMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAF 264
Query: 411 WKGLGPRIVMIGTLTALQWFIY 346
+KG PR+++I L + +Y
Sbjct: 265 YKGAVPRMIVIAPLFGIAQTVY 286
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 370 EGTDHHDPGPQTLPHSGPAELAHDRADGRGLVLVEFGHNRIGWVGDDSAE 519
EG H G PH L+ ++ +G+ L++ GH WVG D+ E
Sbjct: 876 EGALHTKAGVIPQPHR--YHLSAEKLSRQGVFLMDTGHAFYIWVGKDTPE 923
>SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25)
Length = 854
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 419 AQPSLLMIEPTVAVLSWLSLDTTVSAGWETIAQNTPAM*P--AANVTTSC----SPLGAL 580
A+ L + EP + + W S+++ V A ++ +A N A+ +NV C S +GA+
Sbjct: 268 AREDLDISEPAIYLDIWRSMNSNVGAVYKGLAGNVDAVYKGLVSNVGAVCTGLVSNVGAV 327
Query: 581 LTGLGHNI 604
GL N+
Sbjct: 328 CKGLASNV 335
>SB_14513| Best HMM Match : rve (HMM E-Value=0.14)
Length = 1101
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 285 GLWHRGWRRPGHPQPDL 335
G W R R P HP+PDL
Sbjct: 563 GRWRRESRAPNHPRPDL 579
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,379,653
Number of Sequences: 59808
Number of extensions: 488732
Number of successful extensions: 1460
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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