Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_I09
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    27   0.19 
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    27   0.19 
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   3.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   4.0  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   5.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   7.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   7.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   7.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -1

Query: 573 PKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIMSKLG---WAGVWKG 403
           PK    ++++    +      IVS+P DTV  ++          I+ K     WA ++K 
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 402 LGPRI--------VMIGTLTALQWFIYDAVQGL 328
            G           ++ GT  AL   +YD ++ L
Sbjct: 267 EGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -1

Query: 483 VSKLNQDKTAT-VGSIMSKL----GWAGVWKGLGPRIVMIGTLTALQWFIYDAVQGLAED 319
           V K   ++  T +G+ ++K+    G  G+++G G  +  I    A  +  YD  +G+  D
Sbjct: 147 VGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD 206


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -1

Query: 573 PKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIMSKLG---WAGVWKG 403
           PK    ++++    +      IVS+P DTV  ++          I+ K     WA ++K 
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 402 LGPRI--------VMIGTLTALQWFIYDAVQGL 328
            G           ++ GT  AL   +YD ++ L
Sbjct: 267 EGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -1

Query: 483 VSKLNQDKTAT-VGSIMSKL----GWAGVWKGLGPRIVMIGTLTALQWFIYDAVQGLAED 319
           V K   ++  T +G+ ++K+    G  G+++G G  +  I    A  +  YD  +G+  D
Sbjct: 147 VGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD 206


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 270 EPKPHGLWHRGWR 308
           EP P   W++GW+
Sbjct: 203 EPSPKTPWYKGWK 215


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 542 ANVTTSCSPLGALLTGLGHNILVQQLKGAFEAS 640
           A + T  +PL     G+GH +    L G  + S
Sbjct: 313 AALATEHTPLSVKFPGMGHGLQPPDLAGTSQGS 345


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -2

Query: 545 LQLVTLPVCSALSSPTQPIRLCP 477
           L+  T P+C A       ++ CP
Sbjct: 70  LRAYTCPICGACGDIAHTVKYCP 92


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 358 LQRGEGTDHHDPGPQTLPHSGPAELAHDRADG 453
           LQ+G G   H+P     P  G      D +DG
Sbjct: 199 LQQGLGLQGHNPSSGLQPGEGLPMWKSDTSDG 230



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 391 PGPQTLPHSGP 423
           PGPQ  PH  P
Sbjct: 21  PGPQPSPHQSP 31


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +2

Query: 392 LGPRPFHTPAQPSLLMIEPTVAVLSWLSLDTTVSAGWETIA 514
           +G RP H PA  + L    T    +  +   T +A   T A
Sbjct: 89  IGSRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTTA 129



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 427 RLGRSVEGSGAQDRDD 380
           R  R  +G GA DRDD
Sbjct: 267 RKRRQNDGEGADDRDD 282


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = -3

Query: 247 NEKPSLENANYTQRWTNTDLETFPANYLLFNFNTTRELLSESM*REMFDTSSFRIN 80
           N +  L  +N  Q+  N D      N+ + N N    +L+        D + F+I+
Sbjct: 374 NREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDRTPFKIS 429


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = -3

Query: 247 NEKPSLENANYTQRWTNTDLETFPANYLLFNFNTTRELLSESM*REMFDTSSFRIN 80
           N +  L  +N  Q+  N D      N+ + N N    +L+        D + F+I+
Sbjct: 374 NREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDRTPFKIS 429


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = -3

Query: 247 NEKPSLENANYTQRWTNTDLETFPANYLLFNFNTTRELLSESM*REMFDTSSFRIN 80
           N +  L  +N  Q+  N D      N+ + N N    +L+        D + F+I+
Sbjct: 374 NREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDRTPFKIS 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,590
Number of Sequences: 438
Number of extensions: 4533
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)