Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_I07
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0297 + 16602176-16602553                                         32   0.64 
01_06_0851 + 32455364-32458050,32458883-32458922                       30   2.6  
01_06_0581 - 30386018-30386440                                         29   4.5  
05_03_0429 - 13908763-13909047                                         28   7.9  
04_04_0509 - 25763685-25764293                                         28   7.9  

>10_08_0297 + 16602176-16602553
          Length = 125

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 496 LETAASGGLVAGGQGSRGXAEAGAPRPNTGAG 591
           L +  +    AGG+G RG  + GAP P  GAG
Sbjct: 34  LSSRRASRAAAGGRGGRGRRKGGAPIPAAGAG 65


>01_06_0851 + 32455364-32458050,32458883-32458922
          Length = 908

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 508 ASGGLVAGGQGSRGXAEAGAPRPNTGAGP 594
           A    VA GQG    + A AP P  GAGP
Sbjct: 15  AVAACVARGQGGGNSSSAAAPAPAAGAGP 43


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 273 SGVRSQVLERLEMRLRSGGGGARRQ 347
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>05_03_0429 - 13908763-13909047
          Length = 94

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +1

Query: 523 VAGGQGSRGXAEAGAPRPNTGAG 591
           VAGG G RG     A RP  GAG
Sbjct: 70  VAGGTGERGGRRGEAVRPRGGAG 92


>04_04_0509 - 25763685-25764293
          Length = 202

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 529 GGQGSRGXAEAGAPRPNTGAGPPXAXCRXRXPGKDIWN 642
           GG G  G + +    P+ GAG P +  R     +  WN
Sbjct: 14  GGNGGGGGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWN 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,089
Number of Sequences: 37544
Number of extensions: 214545
Number of successful extensions: 1002
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)