Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I04
(793 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 154 7e-38
03_01_0547 + 4093196-4093657,4094267-4095148 154 7e-38
03_01_0544 + 4082528-4082989,4083585-4084466 154 7e-38
03_01_0543 + 4076981-4077442,4078145-4079026 154 7e-38
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 3e-06
02_04_0462 + 23131433-23132836 50 3e-06
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 44 1e-04
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 43 2e-04
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 43 2e-04
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 43 2e-04
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 40 0.002
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 32 0.45
09_04_0749 + 19919367-19920869 31 1.0
03_01_0545 - 4086692-4087591 30 1.8
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 30 2.4
10_08_0226 - 16001958-16002527 29 3.2
02_03_0310 - 17577954-17578133,17578243-17578297,17578773-175788... 29 3.2
12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896 29 4.2
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 4.2
03_06_0333 - 33204345-33204803 29 5.6
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 28 7.4
08_02_1139 - 24638824-24639325,24639528-24639713,24639801-246405... 28 7.4
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 7.4
07_01_0211 + 1568646-1568716,1568722-1569085 28 7.4
03_04_0206 - 18493178-18495310 28 7.4
08_01_0050 + 350768-351214,352597-352717,352944-353118,353225-35... 28 9.8
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 28 9.8
02_04_0271 + 21445113-21445865,21446727-21446788,21446927-214470... 28 9.8
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 28 9.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 154 bits (374), Expect = 7e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGI 191
ALQEA+PGDNVGFNVKNV+V+ +
Sbjct: 286 ALQEALPGDNVGFNVKNVAVKDL 308
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
L + L + + + + K+L+RGYVA +SK++P K AA FT
Sbjct: 272 GLTTEVKSVEMHHEA-LQEALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKEAASFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP 185
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KFA
Sbjct: 344 GYAPVLDCHTSHIAVKFA 361
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 154 bits (374), Expect = 7e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGI 191
ALQEA+PGDNVGFNVKNV+V+ +
Sbjct: 286 ALQEALPGDNVGFNVKNVAVKDL 308
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
L + L + + + + K+L+RGYVA +SK++P K AA FT
Sbjct: 272 GLTTEVKSVEMHHEA-LQEALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKEAASFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP 185
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KFA
Sbjct: 344 GYAPVLDCHTSHIAVKFA 361
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 154 bits (374), Expect = 7e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGI 191
ALQEA+PGDNVGFNVKNV+V+ +
Sbjct: 286 ALQEALPGDNVGFNVKNVAVKDL 308
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
L + L + + + + K+L+RGYVA +SK++P K AA FT
Sbjct: 272 GLTTEVKSVEMHHEA-LQEALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKEAASFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP 185
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KFA
Sbjct: 344 GYAPVLDCHTSHIAVKFA 361
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 154 bits (374), Expect = 7e-38
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGI 191
ALQEA+PGDNVGFNVKNV+V+ +
Sbjct: 286 ALQEALPGDNVGFNVKNVAVKDL 308
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
L + L + + + + K+L+RGYVA +SK++P K AA FT
Sbjct: 272 GLTTEVKSVEMHHEA-LQEALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKEAASFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP 185
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KFA
Sbjct: 344 GYAPVLDCHTSHIAVKFA 361
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEALQEA 245
+ P++DV+ I G GTV GRVE G +K G I+ P+ + T V VEM + L
Sbjct: 269 LMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHG 328
Query: 244 VPGDNVGFNVKNV 206
GDNVG ++ +
Sbjct: 329 EAGDNVGLLLRGL 341
>02_04_0462 + 23131433-23132836
Length = 467
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEA 245
P + ++DV+ I G GTV GR+E G +K G V T V VEM + + +A
Sbjct: 278 PFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDA 337
Query: 244 VPGDNVGFNVKNVSVQGI 191
+ GDNVG ++ + I
Sbjct: 338 MAGDNVGLLLRGMQKDDI 355
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = -1
Query: 424 QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 245
+ P P+ D YK +GTV +G++E+G + G ++ P +V SV + ++ A
Sbjct: 180 KGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSA 237
Query: 244 VPGDNVGFNVKNVSVQGIAS 185
PG+NV + + I +
Sbjct: 238 APGENVRVKLSGIEEDDITA 257
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREH 745
GEFE G + GQTREH
Sbjct: 67 GEFETGYERGGQTREH 82
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
R GY +AVA+VPIS +N++ ++ L G + P SR
Sbjct: 406 RSCGYKDSAVAWVPISAMENENLMTTASDTRLSSWYDGNCLLKAIDTLPP--PSR----- 458
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHH 263
P P+ DV+ +G V + G+VE G + G+ ++ P VK++E +
Sbjct: 459 ---DVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNS 515
Query: 262 EALQEAVPGDNVGFNVKNV 206
+ A GDNV ++ +
Sbjct: 516 SSCNLARAGDNVAIGLQGI 534
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 483 DGKCLIEALDAILPPARPTDKPPASSPCKTYT 388
DG CL++A+D + PP+R KP C ++
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFS 473
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -3
Query: 713 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 618
LIV VNKMDS E YS+ RF IK ++ ++++
Sbjct: 377 LIVVVNKMDSVE--YSKERFNFIKSQLGAFLR 406
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAV 242
P + P+ DV K G G++ETG ++ G+ V+ +P VKS+E + A
Sbjct: 479 PLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIAR 538
Query: 241 PGDNVGFNVKNV 206
GDNV +++ +
Sbjct: 539 AGDNVAVSLQGI 550
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 618
+QLIV VNKMD+ YS+ RFE IK ++ S+++
Sbjct: 391 EQLIVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAV 242
P + P+ DV K G G++ETG ++ G+ V+ +P VKS+E + A
Sbjct: 479 PLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIAR 538
Query: 241 PGDNVGFNVKNV 206
GDNV +++ +
Sbjct: 539 AGDNVAVSLQGI 550
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 618
+QLIV VNKMD+ YS+ RFE IK ++ S+++
Sbjct: 391 EQLIVAVNKMDAI--GYSKERFEFIKVQLGSFLR 422
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = -1
Query: 424 QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 245
+ P P+ D YK +GTV +G++E+G ++ G ++ P +V + + ++ A
Sbjct: 225 KGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRA 282
Query: 244 VPGDNVGFNVKNVSVQGI 191
P +NV + + + I
Sbjct: 283 GPAENVRVKLSGIEDEDI 300
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREH 745
GEFE G K GQTREH
Sbjct: 112 GEFETGYEKGGQTREH 127
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -3
Query: 716 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 618
+LIV +NKMD +S+ R++EI+ ++ +++
Sbjct: 138 KLIVVINKMDEPTVKWSKERYDEIESKMVPFLR 170
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -3
Query: 689 DSTEPPYSEPRFEEIKKEVSSYIKKIWLQPSCCRFRAHFWMARRQHVGAFN--QNALGSR 516
D T PPY PR EEI ++ + + L PS F W R G++ L
Sbjct: 49 DYTPPPYDGPRAEEISRKRAEF-----LSPSLFHFYDRPWAYRHPRFGSYRDYHKYLFDE 103
Query: 515 DGR 507
DGR
Sbjct: 104 DGR 106
>09_04_0749 + 19919367-19920869
Length = 500
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = -1
Query: 460 SRCHPATCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 281
+R H A C C + + G VPVG + + PG V ++ T +
Sbjct: 130 ARRHGAACAAFLTQTCAVDVVYTHARSGRLPVPVGEADGPLRLPGLPVELDAGDVPTFLA 189
Query: 280 SVEMHHEALQEAVPGDNVGF-NVKNVSV 200
+ + HH +++ + VG NV +V V
Sbjct: 190 AHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>03_01_0545 - 4086692-4087591
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -3
Query: 524 GSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPLRLPPARR 393
G+R GR VR A A L ++ PS PA + LPP R
Sbjct: 170 GNRRGRRRVRHAHAAATAPLMMTSPSPRTPAAAVARWDLPPRGR 213
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 413 AGGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGHFG*RLQHVVSVP---SRNGH 583
A G S+G ++ A + +FPS P+L L H Q+ +++P S GH
Sbjct: 1399 APGFSIGSTSYANSAPAGVPYFPSIAPTLLGPAGALPAQH---TRQYAINLPEGSSTVGH 1455
Query: 584 ESDSSW 601
+S+ W
Sbjct: 1456 DSNRKW 1461
>10_08_0226 - 16001958-16002527
Length = 189
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 302 GGGKDNNGTWFQHTSFNSADGHGTNTTDFVYVLQGEDAGGLSVGRAGGR 448
GGG G+ + T F S G G+++ AGG G AGG+
Sbjct: 71 GGGWGGGGSQYNGTGFGSGSGQGSSSGSVSQGGGSASAGGGGGGVAGGQ 119
>02_03_0310 -
17577954-17578133,17578243-17578297,17578773-17578860,
17580024-17580318
Length = 205
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 559 LRAIQKWARKRQQLGCSQIFLMYEDTSFLISSNLGSLYGGSVESIL 696
L A+QKWA + + C++ L+ DTS ++SN + GSV+ +L
Sbjct: 149 LNAVQKWALEAKHRNCARHMLIGRDTS--MTSNSKRSF-GSVQMLL 191
>12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896
Length = 231
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 372 PIPPILYTSCRGKTQGACQWGGQVAGWHRE 461
P+P T+ RG C GG VAG RE
Sbjct: 36 PVPSTRATTVRGSVDSDCGTGGSVAGNRRE 65
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 361 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 224
+G + + P TIV +P T KSVE +E L A G ++G
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>03_06_0333 - 33204345-33204803
Length = 152
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 438 ARPTDKPPASSPCKTYTKSVVLVPCPSAELKL-VC*N 331
A+ D PPA P T S L CP LKL VC N
Sbjct: 3 AKAIDCPPAPRPTPASTPSTGLSSCPRDALKLRVCAN 39
>12_02_0803 +
23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 138 ADFTAQVIVLNHPGQISNXLHTSLGLPH 55
AD + QV+ N PG+ SN L S PH
Sbjct: 27 ADASTQVLSANFPGKGSNSLSLSSAFPH 54
>08_02_1139 -
24638824-24639325,24639528-24639713,24639801-24640543,
24640709-24640870,24641141-24641500
Length = 650
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 569 MARRQHVGAFNQNALGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPLRLPP 402
+A++ F N S +G S R A T LK+ P+ SP+ +PP
Sbjct: 47 LAKKFESNLFGANQKSSSNGCLSERMAARTGFGVLKIDTSRVGYSTPIRSPVTIPP 102
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 639 LLDFLKSGLTVWWFSGIHFVY 701
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 412 RRGLVSGAGRWQDGIESFNEAFS 480
RRG SG GRW D + ++ E+++
Sbjct: 15 RRGPTSGWGRWDDTVAAYAESYA 37
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 701 VNKMDSTEPPYSEPRFEEIKKEV 633
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>08_01_0050 +
350768-351214,352597-352717,352944-353118,353225-353295,
353575-354209
Length = 482
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 400 AGGRRRGLVSGAGRWQDGIESFNEAFSVSFAFLTLHLPSLEPRAFWLKAPTCCLRAIQKW 579
AGG L GRW G + F++ + L S +P + L AP + +
Sbjct: 110 AGGGGARLEVPPGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAP------LPSY 163
Query: 580 ARKRQQLGCSQIFLMYED--TSFLISSNLGSLYG 675
R R++LG I L++ + +I+ N G++ G
Sbjct: 164 GRGRERLGPRHISLIHGEGLDDVVITGNNGTIDG 197
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 674 PYSEPRFEEIKKEVSSYIKKIWLQPSCCRFRAHF 573
P E + + V++ + + W++ SCC+++A F
Sbjct: 520 PAIEEHERDSQDSVATSLAEKWIEASCCKYKADF 553
>02_04_0271 +
21445113-21445865,21446727-21446788,21446927-21447027,
21447165-21447248,21448054-21448058,21448193-21448267,
21448339-21448416,21448896-21448952,21449351-21449421,
21449529-21449628,21449758-21449862,21450004-21450066,
21450144-21450266,21450371-21450514,21450598-21450672
Length = 631
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 509 RWSVRKAKLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYW 372
RW R A + A+ L+ P C PA + PP RR+Q R W
Sbjct: 6 RWR-RLAAVATRAASTLTAPECCSPAVVA-----PPHRRVQERRKW 45
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 315 TTMVPGFNTPVSTLPTGTVPIPPILYTSCRG---KTQGACQWGGQVAGWHRELQ*GIFRQ 485
T+ +P F P T+P+ +PP + S G + G Q G +A ++ Q GI Q
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP--FASLAGLPVRPSGVPQVSGAMANMVQDQQQGIANQ 595
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,291,187
Number of Sequences: 37544
Number of extensions: 632752
Number of successful extensions: 2541
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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