Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I04
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 174 7e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 174 7e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 174 7e-44
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 42 7e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 42 7e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 42 7e-04
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 38 0.011
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 35 0.058
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 34 0.10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 34 0.10
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 33 0.23
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.41
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.2
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 29 2.9
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 2.9
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 2.9
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75530-5|CAE48499.1| 216|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm rece... 28 6.7
AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical ... 28 6.7
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 28 8.8
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 28 8.8
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 28 8.8
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 28 8.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 174 bits (423), Expect = 7e-44
Identities = 90/150 (60%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMA-GGA*GRQS*RKMPH*SSRCHPA 443
++ GYNP AV FVPISG++GDNMLE S+ MP +G A G S + + P
Sbjct: 145 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 204
Query: 442 TCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHH 263
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHH
Sbjct: 205 QRPT--DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHH 262
Query: 262 EALQEAVPGDNVGFNVKNVSVQGIASWLCC 173
E+L EAVPGDNVGFNVKNVSV+ I C
Sbjct: 263 ESLPEAVPGDNVGFNVKNVSVKDIRRGSVC 292
Score = 98.7 bits (235), Expect = 4e-21
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -2
Query: 528 PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSA 355
PWFKGW VERKEG A GK L+EALD+I+PP RPTD+P P + K + VP
Sbjct: 175 PWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP-LRLPLQDVYKIGGIGTVPVGRV 233
Query: 354 ELKLVC*NQVXXXXXXXXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYV 175
E ++ V + L + + + + + + K++RRG V
Sbjct: 234 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHES-LPEAVPGDNVGFNV-KNVSVKDIRRGSV 291
Query: 174 AGDSKNNPPKGAADFTAQVIVLNHPGQISN 85
DSK +P K A F AQVI++NHPGQISN
Sbjct: 292 CSDSKQDPAKEARTFHAQVIIMNHPGQISN 321
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -3
Query: 722 CQQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQPSCCRF 585
C L+V NKMDSTEPP+SE RF EI EVS +IKKI P F
Sbjct: 111 CAVLVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 156
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKF 33
GYTPVLDCHTAHIACKF
Sbjct: 322 GYTPVLDCHTAHIACKF 338
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 174 bits (423), Expect = 7e-44
Identities = 90/150 (60%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMA-GGA*GRQS*RKMPH*SSRCHPA 443
++ GYNP AV FVPISG++GDNMLE S+ MP +G A G S + + P
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
Query: 442 TCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHH 263
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHH
Sbjct: 239 QRPT--DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHH 296
Query: 262 EALQEAVPGDNVGFNVKNVSVQGIASWLCC 173
E+L EAVPGDNVGFNVKNVSV+ I C
Sbjct: 297 ESLPEAVPGDNVGFNVKNVSVKDIRRGSVC 326
Score = 98.7 bits (235), Expect = 4e-21
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -2
Query: 528 PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSA 355
PWFKGW VERKEG A GK L+EALD+I+PP RPTD+P P + K + VP
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP-LRLPLQDVYKIGGIGTVPVGRV 267
Query: 354 ELKLVC*NQVXXXXXXXXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYV 175
E ++ V + L + + + + + + K++RRG V
Sbjct: 268 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHES-LPEAVPGDNVGFNV-KNVSVKDIRRGSV 325
Query: 174 AGDSKNNPPKGAADFTAQVIVLNHPGQISN 85
DSK +P K A F AQVI++NHPGQISN
Sbjct: 326 CSDSKQDPAKEARTFHAQVIIMNHPGQISN 355
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQPSCCRF 585
+QLIV NKMDSTEPP+SE RF EI EVS +IKKI P F
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 190
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKF 33
GYTPVLDCHTAHIACKF
Sbjct: 356 GYTPVLDCHTAHIACKF 372
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
GEFEAGI K GQTREHA
Sbjct: 121 GEFEAGISKNGQTREHA 137
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 174 bits (423), Expect = 7e-44
Identities = 90/150 (60%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMA-GGA*GRQS*RKMPH*SSRCHPA 443
++ GYNP AV FVPISG++GDNMLE S+ MP +G A G S + + P
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
Query: 442 TCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHH 263
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHH
Sbjct: 239 QRPT--DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHH 296
Query: 262 EALQEAVPGDNVGFNVKNVSVQGIASWLCC 173
E+L EAVPGDNVGFNVKNVSV+ I C
Sbjct: 297 ESLPEAVPGDNVGFNVKNVSVKDIRRGSVC 326
Score = 98.7 bits (235), Expect = 4e-21
Identities = 59/150 (39%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -2
Query: 528 PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSA 355
PWFKGW VERKEG A GK L+EALD+I+PP RPTD+P P + K + VP
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP-LRLPLQDVYKIGGIGTVPVGRV 267
Query: 354 ELKLVC*NQVXXXXXXXXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYV 175
E ++ V + L + + + + + + K++RRG V
Sbjct: 268 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHES-LPEAVPGDNVGFNV-KNVSVKDIRRGSV 325
Query: 174 AGDSKNNPPKGAADFTAQVIVLNHPGQISN 85
DSK +P K A F AQVI++NHPGQISN
Sbjct: 326 CSDSKQDPAKEARTFHAQVIIMNHPGQISN 355
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQPSCCRF 585
+QLIV NKMDSTEPP+SE RF EI EVS +IKKI P F
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 190
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKF 33
GYTPVLDCHTAHIACKF
Sbjct: 356 GYTPVLDCHTAHIACKF 372
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
GEFEAGI K GQTREHA
Sbjct: 121 GEFEAGISKNGQTREHA 137
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV----EMHHEALQE 248
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 253 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 312
Query: 247 AVPGDNVGFNVKNVSVQGI 191
A PGD +G ++ + + +
Sbjct: 313 AEPGDQLGVLLRGLGPKDV 331
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV----EMHHEALQE 248
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 254 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 313
Query: 247 AVPGDNVGFNVKNVSVQGI 191
A PGD +G ++ + + +
Sbjct: 314 AEPGDQLGVLLRGLGPKDV 332
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV----EMHHEALQE 248
+F + VY I G GTV G++E G+LK G I + T VKSV E + + +
Sbjct: 254 MFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQ 313
Query: 247 AVPGDNVGFNVKNVSVQGI 191
A PGD +G ++ + + +
Sbjct: 314 AEPGDQLGVLLRGLGPKDV 332
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -1
Query: 388 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 209
K +GTV +G++E+G ++ G +V P +V + + V GDN+ F +K
Sbjct: 347 KYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKG 406
Query: 208 V 206
+
Sbjct: 407 I 407
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+ L++ VNKMD + E RF+EI+ +++ +++K+ P
Sbjct: 248 KHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
GEFE G + GQTREH+
Sbjct: 223 GEFETGFDRGGQTREHS 239
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
GEFEAGI K GQTREHA
Sbjct: 121 GEFEAGISKNGQTREHA 137
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVP 239
V P+ I G GTV VG +E GVLK G V + T +++ ++++E
Sbjct: 241 VMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRA 300
Query: 238 GDNVGFNVKNV 206
GD+ G + V
Sbjct: 301 GDHCGVLCRGV 311
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -1
Query: 412 VFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVP 239
V P+ I G GTV VG +E GVLK G V + T +++ ++++E
Sbjct: 241 VMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRA 300
Query: 238 GDNVGFNVKNV 206
GD+ G + V
Sbjct: 301 GDHCGVLCRGV 311
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -3
Query: 716 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 615
QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 310 QLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 341
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHAXXL 733
GEFE G GQT+EHA L
Sbjct: 284 GEFETGFENGGQTKEHALLL 303
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 483 DGKCLIEALDAILPPARPTDKP 418
DG CL+E +D+ + P P+D P
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGP 392
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -3
Query: 716 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 615
QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 328 QLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 359
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHAXXL 733
GEFE G GQT+EHA L
Sbjct: 302 GEFETGFENGGQTKEHALLL 321
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 483 DGKCLIEALDAILPPARPTDKP 418
DG CL+E +D+ + P P+D P
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGP 410
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 251
P F + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 250 EAVPGDNVGFNVKNV 206
G + F +K +
Sbjct: 432 IVKCGQSASFALKKI 446
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 299
P F + D+Y + G+GT+ G + +G ++ I++ P +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTS 412
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 391 YKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 215
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 210 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 391 YKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 215
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 169 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 227
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 333 FNTPVSTLPTGTV-PIPPILYTSCRGKTQGAC 425
+N V +LP T PI P++ T C T G+C
Sbjct: 261 YNKNVPSLPLNTPKPITPVVITECASNTNGSC 292
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 334 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 209
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 482 SALPSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 604
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 2 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 42
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 482 SALPSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 604
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 35 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 482 SALPSLRSTCHPLNQGHFG*RLQHVVSVPSRNGHESDSSWV 604
S+ S + P+ Q HF R QHV S PSR+ D + V
Sbjct: 35 SSPSSTHANTAPVVQSHFAHRPQHVSSAPSRSMEIDDQNGV 75
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = +2
Query: 290 SSDVGGGKDNNGTWF--QHTS---FNSADGHGTNTTDFVYVLQGEDAGGLSVGRAGGR-- 448
S +V GK ++G W Q TS F DGH T T V+ G+ GR R
Sbjct: 97 SLNVAAGKTHSGVWLGAQRTSATAFRWTDGHTTGTEAMVFG-PGQPDNDHGAGRGPQRCL 155
Query: 449 --MASRASMRHFPSALPSLRS 505
MA S + P L +L+S
Sbjct: 156 QLMALTPSYWNIPGHLINLKS 176
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +3
Query: 186 DAIPXTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVSTLP 359
D +TF + S R S +S D T V + + VP + VST P
Sbjct: 30 DGATVGNTFTQSSAVSESQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVSTAP 89
Query: 360 TGTVPIPPILY 392
T +PPI Y
Sbjct: 90 TTKATLPPITY 100
>Z75530-5|CAE48499.1| 216|Caenorhabditis elegans Hypothetical
protein C47E8.9 protein.
Length = 216
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 164 PKTTHLRVLQILQLKSLCLTILVKSQTGYTPV 69
PK T L +L L L C IL QTGY P+
Sbjct: 10 PKATTLHLLTTLYLVD-CAPILPNVQTGYVPI 40
>AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm
receptor protein 120 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 630 GYFLLDFLKS--GLTVWWFSGIHFVYSYDELLTPRVKATRHAHG 755
G+F+ F S G+ V + S HF Y Y + +PR+ RH HG
Sbjct: 88 GHFIAAFYCSTFGICVLFLSA-HFFYRYSAVCSPRL--LRHLHG 128
>AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical
protein Y45G12C.6 protein.
Length = 274
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 630 GYFLLDFLKS--GLTVWWFSGIHFVYSYDELLTPRVKATRHAHG 755
G+F+ F S G+ V + S HF Y Y + +PR+ RH HG
Sbjct: 88 GHFIAAFYCSTFGICVLFLSA-HFFYRYSAVCSPRL--LRHLHG 128
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 145 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 204
Query: 320 CCLCPR 303
C C R
Sbjct: 205 KCGCGR 210
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 185 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 244
Query: 320 CCLCPR 303
C C R
Sbjct: 245 KCGCGR 250
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 246 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 305
Query: 320 CCLCPR 303
C C R
Sbjct: 306 KCGCGR 311
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 145 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 204
Query: 320 CCLCPR 303
C C R
Sbjct: 205 KCGCGR 210
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 185 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 244
Query: 320 CCLCPR 303
C C R
Sbjct: 245 KCGCGR 250
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 246 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 305
Query: 320 CCLCPR 303
C C R
Sbjct: 306 KCGCGR 311
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 325 YLVSTHQFQLCRRARYQYHRFCIRLAGGRRRGLVSGAGRWQDGIESFNEAFSVSFA-FLT 501
Y+++T+ Q +R + LA + S G W+ GIE ++ F F +
Sbjct: 59 YIIATNLLQRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIEFYDAVFRRGFIDSIC 118
Query: 502 LHLPSLEPRAFWLKAPTCCLRAIQKWA 582
L + P AFW C+ A+ K A
Sbjct: 119 LAVNPRSPSAFW-----ACMFALSKIA 140
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -3
Query: 488 KLTENASLKLSMPSCHLPAPLTSPLRLPPARRIQNRWYWYR---ARRQS*NWCVETR-YH 321
+L E+ S + LP PL + +R + NR W R RR+ + +R H
Sbjct: 185 RLNEDVSATANSAQLVLPTPLFNQMRFTESNMSLNRHNWVRETFTRRECSRFIASSRDLH 244
Query: 320 CCLCPR 303
C C R
Sbjct: 245 KCGCGR 250
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 614 IWLQPSCCRFRAHFWMARRQHVGAFNQNALGSRDGRWSVRKAKL 483
+W Q S + AHF++ + + A +N++ S + + VR KL
Sbjct: 134 VWRQSSKFKLPAHFFINKMDKLAANFENSVDSVEQKLGVRAVKL 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,103,294
Number of Sequences: 27780
Number of extensions: 475360
Number of successful extensions: 1559
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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