Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_I04
(793 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 150 9e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 150 9e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 150 9e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 150 9e-37
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 52 3e-07
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 49 4e-06
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 40 0.001
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 40 0.002
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 39 0.003
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 35 0.071
At5g48900.1 68418.m06049 pectate lyase family protein similar to... 31 1.2
At5g35980.1 68418.m04333 protein kinase family protein contains ... 29 3.5
At1g01060.2 68414.m00007 myb family transcription factor contain... 29 3.5
At1g01060.1 68414.m00006 myb family transcription factor contain... 29 3.5
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.7
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 29 4.7
At3g04650.1 68416.m00498 expressed protein 29 4.7
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 29 4.7
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 28 6.2
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 28 6.2
At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein ... 28 8.2
At5g18470.1 68418.m02175 curculin-like (mannose-binding) lectin ... 28 8.2
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 28 8.2
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 28 8.2
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 28 8.2
At2g38070.1 68415.m04673 expressed protein and genscan 28 8.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 150 bits (364), Expect = 9e-37
Identities = 81/165 (49%), Positives = 101/165 (61%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGIASWLCCW*LQKQPT*GCCRFYS 125
+L EA+PGDNVGFNVKNV+V+ + + P G F S
Sbjct: 286 SLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTS 330
Score = 68.1 bits (159), Expect = 6e-12
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPT 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
+ L + L + + + + K+L+RGYVA +SK++P KGAA+FT
Sbjct: 272 GLTTEVKSVEMHHESLL-EALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKGAANFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KF+
Sbjct: 344 GYAPVLDCHTSHIAVKFS 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 9e-37
Identities = 81/165 (49%), Positives = 101/165 (61%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGIASWLCCW*LQKQPT*GCCRFYS 125
+L EA+PGDNVGFNVKNV+V+ + + P G F S
Sbjct: 286 SLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTS 330
Score = 68.1 bits (159), Expect = 6e-12
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPT 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
+ L + L + + + + K+L+RGYVA +SK++P KGAA+FT
Sbjct: 272 GLTTEVKSVEMHHESLL-EALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKGAANFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KF+
Sbjct: 344 GYAPVLDCHTSHIAVKFS 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 9e-37
Identities = 81/165 (49%), Positives = 101/165 (61%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGIASWLCCW*LQKQPT*GCCRFYS 125
+L EA+PGDNVGFNVKNV+V+ + + P G F S
Sbjct: 286 SLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTS 330
Score = 68.1 bits (159), Expect = 6e-12
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPT 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
+ L + L + + + + K+L+RGYVA +SK++P KGAA+FT
Sbjct: 272 GLTTEVKSVEMHHESLL-EALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKGAANFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KF+
Sbjct: 344 GYAPVLDCHTSHIAVKFS 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 9e-37
Identities = 81/165 (49%), Positives = 101/165 (61%)
Frame = -1
Query: 619 RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAGGA*GRQS*RKMPH*SSRCHPAT 440
++ GYNP + FVPISG+ GDNM+E ST + +G + + +
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT-----------LLEALDQINEPK 227
Query: 439 CPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 260
P P PLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 228 RPS--DKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 259 ALQEAVPGDNVGFNVKNVSVQGIASWLCCW*LQKQPT*GCCRFYS 125
+L EA+PGDNVGFNVKNV+V+ + + P G F S
Sbjct: 286 SLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTS 330
Score = 68.1 bits (159), Expect = 6e-12
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 480 GKCLIEALDAILPPARPTDKPPASSPCKTYTK--SVVLVPCPSAELKLVC*NQVXXXXXX 307
G L+EALD I P RP+DKP P + K + VP E ++ V
Sbjct: 213 GPTLLEALDQINEPKRPSDKP-LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPT 271
Query: 306 XXXXXXXXXLWRCTTKLSKKLYLETM*VST*RTCPXKELRRGYVAGDSKNNPPKGAADFT 127
+ L + L + + + + K+L+RGYVA +SK++P KGAA+FT
Sbjct: 272 GLTTEVKSVEMHHESLL-EALPGDNVGFNV-KNVAVKDLKRGYVASNSKDDPAKGAANFT 329
Query: 126 AQVIVLNHPGQISN 85
+QVI++NHPGQI N
Sbjct: 330 SQVIIMNHPGQIGN 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQP 600
+Q+I NKMD+T P YS+ R++EI KEVSSY+KK+ P
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 83 GYTPVLDCHTAHIACKFA 30
GY PVLDCHT+HIA KF+
Sbjct: 344 GYAPVLDCHTSHIAVKFS 361
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREHA 742
G FEAGI K GQTREHA
Sbjct: 121 GGFEAGISKDGQTREHA 137
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -1
Query: 424 QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQ 251
+ P + ++DV+ I G GTV GRVE G +K G V T V VEM + L
Sbjct: 285 ELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILD 344
Query: 250 EAVPGDNVGFNVKNV 206
EA+ GDNVG ++ +
Sbjct: 345 EALAGDNVGLLLRGI 359
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVF-----APANITTEVKSVEMHHEAL 254
P + P++DV+ I G GTV GR+E GV+K G V + + V VEM + L
Sbjct: 267 PFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKIL 326
Query: 253 QEAVPGDNVGFNVKNVSVQGI 191
GDNVG ++ + + I
Sbjct: 327 DNGQAGDNVGLLLRGLKREDI 347
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 89 QTGYTPVLDCHTAHIACKFA 30
+ GYTPVLDCHT+HIA KF+
Sbjct: 8 KNGYTPVLDCHTSHIAVKFS 27
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVP 239
P P+ D +K +GTV +G+VE+G ++ G +V P +V ++ + ++ A P
Sbjct: 330 PFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGP 387
Query: 238 GDNVGFNVKNVSVQGIAS 185
G+N+ + + + I S
Sbjct: 388 GENLRVRITGIEDEDILS 405
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -3
Query: 716 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 618
+LIV VNKMD +S+ R++EI++++ ++K
Sbjct: 241 KLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 792 GEFEAGIXKXGQTREH 745
GEFE G + GQTREH
Sbjct: 215 GEFETGYERGGQTREH 230
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -1
Query: 418 PCVFPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAV 242
P + P+ D + G V G++E G ++PG+ V+ P+ ++S+E +A A
Sbjct: 467 PLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIAR 526
Query: 241 PGDNVGFNVKNVSVQGI 191
GDNV ++ + +
Sbjct: 527 AGDNVALALQGIDANQV 543
Score = 34.3 bits (75), Expect = 0.094
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -3
Query: 719 QQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIWLQPSCCRFRAHFWMARRQHVGAF 540
+Q+IV +NKMD YS+ RF+ IK+ V S+++ + S + M + V A
Sbjct: 379 EQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAP 436
Query: 539 NQNALGS 519
+ N L S
Sbjct: 437 SDNRLSS 443
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 34.7 bits (76), Expect = 0.071
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 498 KEGKADGKCLIEALDAILPPARPTDKPPASSPCKTYTKSVVL 373
KE +A G + +ALD +PP RP KP P KT + ++++
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILM 115
>At5g48900.1 68418.m06049 pectate lyase family protein similar to
pectate lyase GP:14531296 from [Fragaria x ananassa];
non-consensus AG donor splice site at exon 2
Length = 417
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = -3
Query: 572 WMARRQHVG----AFNQNALGSRDGRWSV 498
W +RR+H+ F +NA+G RDGR+ V
Sbjct: 81 WQSRRKHLANCAIGFGRNAIGGRDGRYYV 109
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -1
Query: 664 SPDLRKSRRKYPHTS--RRFGYNPAAVAFVPISGWHGDNMLEPSTKMPLVQGMAG 506
SPD R+ +YPH + G +P+A F P+ + P+T + G G
Sbjct: 587 SPDARRRVMQYPHGNGPNGLGTSPSAGNFAPLPLGTSPSQFTPNTNNQFLAGSPG 641
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 498 KEGKADGKCLIEALDAILPPARPTDKPPASSPCK 397
KE + G + +ALD +PP RP KP P K
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRK 107
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 498 KEGKADGKCLIEALDAILPPARPTDKPPASSPCK 397
KE + G + +ALD +PP RP KP P K
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRK 107
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 240 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 341
G + WR W S DLT ++++ A ++ G T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 441 PARPTDKPPASSPCKTYTKSVVLVPCPSAELKLV 340
P+RP PP P KT+ S + P P K++
Sbjct: 149 PSRPNTPPPPPPPSKTHEPSRRITPSPPPPSKIL 182
>At3g04650.1 68416.m00498 expressed protein
Length = 486
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -2
Query: 258 LSKKLYLETM*VST*RTCPXKELRR-GYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNX 82
L+ L LE+ V+ R C +L + S+N P+G D VIV+ H G+ +N
Sbjct: 207 LADSLLLESQMVNLVRPCWISKLEPLNGMWHLSENGTPRGQFD----VIVIAHNGKCANR 262
Query: 81 LHTSLGLP 58
L ++ GLP
Sbjct: 263 LLSASGLP 270
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 219 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 344
L+P+LS + C+S LT V ML+ A+TT++P + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 465 EALDAILPPARPTDKPPASSPCKTYTKSVVL 373
+ALD +PP RP KP P KT + ++++
Sbjct: 3 QALDIAIPPPRPKRKPNNPYPRKTGSGTILM 33
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 450 ILPPARPTDKPPASSPCKTYTKSVVLVP 367
+ PP +P KPP S P K K V P
Sbjct: 100 VKPPTKPPVKPPVSPPAKPPVKPPVYPP 127
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 450 ILPPARPTDKPPASSPCKTYTKSVVLVP 367
+ PP +P KPP S P K K V P
Sbjct: 172 VKPPTKPPVKPPVSPPAKPPVKPPVYPP 199
>At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 435
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 360 TGTVPIPPILYTSCRGKTQGACQWGGQVA 446
TGT P P ++ RG T A W G A
Sbjct: 263 TGTAPFIPSMFPHSRGVTPQASDWNGYQA 291
>At5g18470.1 68418.m02175 curculin-like (mannose-binding) lectin
family protein contains Pfam profile: PF01453 lectin
(probable mannose binding)
Length = 413
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -1
Query: 361 VGRVETGVLKPGTIVV--FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVQGIA 188
VG V +L G VV P + V H +PG +GFN++ +
Sbjct: 134 VGNVSAILLDTGNFVVREIRPGGVPGRVLWQSFDHPT-NTLLPGMKIGFNLRTKKEVSVT 192
Query: 187 SWL 179
SW+
Sbjct: 193 SWI 195
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -1
Query: 448 PATCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 269
P T P P +FPL GG+ +P+ + + V + T +SV
Sbjct: 198 PPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVAT 257
Query: 268 HHEALQEAVPGDNVG 224
+ AV G+ G
Sbjct: 258 FFSQVMAAVGGNTAG 272
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -1
Query: 448 PATCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 269
P T P P +FPL GG+ +P+ + + V + T +SV
Sbjct: 198 PPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVAT 257
Query: 268 HHEALQEAVPGDNVG 224
+ AV G+ G
Sbjct: 258 FFSQVMAAVGGNTAG 272
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -1
Query: 448 PATCPPH*QAPCVFPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 269
P T P P +FPL GG+ +P+ + + V + T +SV
Sbjct: 198 PPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVAT 257
Query: 268 HHEALQEAVPGDNVG 224
+ AV G+ G
Sbjct: 258 FFSQVMAAVGGNTAG 272
>At2g38070.1 68415.m04673 expressed protein and genscan
Length = 619
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 608 LQPSCCRFRAHFWMARRQHVGAFNQNALGSRDGRWS 501
L+ CC ++ M R++VG N ++ RWS
Sbjct: 458 LRDDCCSVENNYEMGVRENVGTIECNKKRTKKSRWS 493
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,323,553
Number of Sequences: 28952
Number of extensions: 458633
Number of successful extensions: 1704
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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