Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H22
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    62   7e-12
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.8  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   6.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 61.7 bits (143), Expect = 7e-12
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = -1

Query: 615 LHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 436
           L   L    +++  +HG   Q +R  +L  F+     VLVAT VAARGLDI  V  VIN+
Sbjct: 425 LATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINY 484

Query: 435 TLPATLEHYIHXXXXXXXXXXXXXXVSLAGEG-ERNLVKSIVKRASKPVKSRQIPPDIVA 259
            LP +++ Y+H               S   E  +RNL   + K  S+    ++IP  + +
Sbjct: 485 DLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQ--AKQEIPEWLGS 542

Query: 258 KXQG 247
           K  G
Sbjct: 543 KSYG 546


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 211 FSXEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHE 101
           F  +E A +Q+ K EK+ +  ++V +  E  PG + E
Sbjct: 3   FGNDEKALEQIAKSEKEPSLTDLVQRWLERTPGLELE 39


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 211 FSXEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHE 101
           F  +E A +Q+ K EK+ +  ++V +  E  PG + E
Sbjct: 163 FGNDEKALEQIAKSEKEPSLTDLVQRWLERTPGLELE 199


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 211 FSXEEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHE 101
           F  +E A +Q+ K EK+ +  ++V +  E  PG + E
Sbjct: 163 FGNDEKALEQIAKSEKEPSLTDLVQRWLERTPGLELE 199


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 211 FSXEEYAEKQMNKMEKQTAKLEVVLKKDEAQPG 113
           F  +E A +Q+ K EK+ +  ++V +  E  PG
Sbjct: 103 FGNDEKALEQIAKSEKEPSLTDLVQRWLERTPG 135


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 132 FLRTTSNLAVCFSILFICFSAYSSXENCDNL 224
           FL   S  ++C +  + C   Y S  N DNL
Sbjct: 237 FLFVLSTFSICITQFYYC---YDSGFNSDNL 264


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 338 SPSPASETDTPARPALAVRPTLCI*CSKVAG 430
           SPSP S      + +   RP  C  C++  G
Sbjct: 115 SPSPTSSVSPEVKDSSRDRPFTCEVCNRSFG 145


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 198 SSXENCDNLRFEFD 239
           +S + CDNL++ FD
Sbjct: 204 NSYQFCDNLQYSFD 217


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 198 SSXENCDNLRFEFD 239
           +S + CDNL++ FD
Sbjct: 195 NSYQFCDNLQYSFD 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,393
Number of Sequences: 336
Number of extensions: 2052
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)