Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H22
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 87 2e-17
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 8e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 8e-13
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 66 2e-11
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 65 6e-11
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 61 9e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 58 8e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 1e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 54 2e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 49 4e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 48 1e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 48 1e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 47 2e-05
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 46 3e-05
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 46 3e-05
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 44 1e-04
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 39 0.004
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 38 0.010
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 38 0.013
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 36 0.051
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 34 0.12
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 34 0.12
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 32 0.48
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 31 1.1
SB_54| Best HMM Match : Actin (HMM E-Value=0) 31 1.1
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 31 1.5
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 31 1.5
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_815| Best HMM Match : Ribosomal_60s (HMM E-Value=0.14) 30 1.9
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 30 2.6
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 30 2.6
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 29 3.4
SB_30232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09) 29 4.5
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 29 4.5
SB_53158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_52326| Best HMM Match : M (HMM E-Value=0.38) 29 5.9
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 5.9
SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4) 28 7.8
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 28 7.8
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 87.0 bits (206), Expect = 2e-17
Identities = 51/129 (39%), Positives = 73/129 (56%)
Frame = -1
Query: 624 AHRLHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTV 445
AH+L ++LG++G+ A ELHG Q QRL++L++F+ + D+LVATD+AARGLDI GV
Sbjct: 21 AHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGVKNS 80
Query: 444 INFTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIVKRASKPVKSRQIPPDI 265
+ TL GE ER +K +VK A VKSR +PP+I
Sbjct: 81 KSVTL--------------------------VGEKERKALKEVVKNARTAVKSRIVPPEI 114
Query: 264 VAKXQGETD 238
+ K G+ +
Sbjct: 115 IEKYSGKIE 123
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -1
Query: 615 LHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 436
+H L + GV+A +HG +Q +R+ +++ F + DVLVATDVA++GLD P + VINF
Sbjct: 103 IHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINF 162
Query: 435 TLPATLEHYI 406
+P +E+Y+
Sbjct: 163 DMPEDIENYV 172
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -1
Query: 615 LHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 436
+H L + GV+A +HG +Q +R+ +++ F + DVLVATDVA++GLD P + VINF
Sbjct: 103 IHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINF 162
Query: 435 TLPATLEHYI 406
+P +E+Y+
Sbjct: 163 DMPEDIENYV 172
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/104 (35%), Positives = 51/104 (49%)
Frame = -1
Query: 624 AHRLHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTV 445
A L + L G +HG +Q +R ++L+ FR +LVAT VAARGLDIP V V
Sbjct: 1113 ADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHV 1172
Query: 444 INFTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIV 313
INF LP +E Y+H S +N+ K ++
Sbjct: 1173 INFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELM 1216
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1
Query: 582 AAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
A+ LH Q R +K FR+ + D+LVATDVA+RGLD P V VIN+ LP T+E YIH
Sbjct: 359 ASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIH 418
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = -1
Query: 606 MLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP 427
M LG+ LH +Q +RL +L RF+ +LVATDVA+RGLDIP V V+N +P
Sbjct: 266 MFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIP 325
Query: 426 ATLEHYIH 403
A + YIH
Sbjct: 326 ADPKDYIH 333
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -1
Query: 615 LHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 436
L + L G +HG Q +R ++L FR+ + VL+AT+VAARGLDI V VINF
Sbjct: 978 LAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINF 1037
Query: 435 TLPATLEHYIH 403
LP+ ++ Y+H
Sbjct: 1038 DLPSDIDEYVH 1048
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 62.1 bits (144), Expect = 5e-10
Identities = 39/132 (29%), Positives = 62/132 (46%)
Frame = -1
Query: 618 RLHVMLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVIN 439
RL +L ++ + LH + Q QRL +L RF+ +L+ATDVAARGLDI + VI+
Sbjct: 471 RLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIH 530
Query: 438 FTLPATLEHYIHXXXXXXXXXXXXXXVSLAGEGERNLVKSIVKRASKPVKSRQIPPDIVA 259
+ +P E Y+H V L G + + +K + ++Q+ +V
Sbjct: 531 YQVPKDPEVYVHRSGRTARASHEGLSVVLVGPEDLAHYRKTMKTLNNASLNKQLKSPLVP 590
Query: 258 KXQGETDQTRTG 223
T+TG
Sbjct: 591 LGFSGKYPTKTG 602
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 61.3 bits (142), Expect = 9e-10
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -1
Query: 585 KAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 406
+A LHG NQ QR +L + D+LVATDVA RG+DI V+ VIN+ + T+E Y
Sbjct: 310 RATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYT 369
Query: 405 H 403
H
Sbjct: 370 H 370
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -1
Query: 573 LHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
LHG Q QR +LK FRE + LVATDVAARGLDIP ++ V+ P ++ YIH
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIH 390
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 579 AELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
A +HG Q +R +K FR Q+ VL++TDV ARGLD+ V+ VIN+ LP E YIH
Sbjct: 264 ASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIH 322
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = -1
Query: 579 AELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
+ +HG +Q +R +K FR + VL+ TD+ ARG+D+ V+ VIN+ LP+ E+YIH
Sbjct: 358 SSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIH 416
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = -1
Query: 597 MLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATL 418
++ ++A + G R + ++F+ + AD+LV TD+A+RGLD V+ VINF P ++
Sbjct: 718 VVALRATKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSM 777
Query: 417 EHYIH 403
YIH
Sbjct: 778 VDYIH 782
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = -1
Query: 591 GVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 412
G+ +H Q QR + +K FR + VL+AT++ RG+D GVN VIN+ P +
Sbjct: 407 GINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVA 466
Query: 411 YIH 403
YIH
Sbjct: 467 YIH 469
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 52.0 bits (119), Expect = 6e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = -1
Query: 591 GVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 412
G+ + ++ + +Q R ++ +F+ ++ V+V TDVAARG+DIP ++ VINF P +
Sbjct: 499 GIDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKL 558
Query: 411 YIH 403
++H
Sbjct: 559 FVH 561
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = -1
Query: 606 MLGMLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP 427
+L + + E+HG Q +R + F ++ +L+ TDVAARGLDIP V+ ++ +
Sbjct: 837 LLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPA 896
Query: 426 ATLEHYIH 403
+ YIH
Sbjct: 897 DDPKEYIH 904
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -1
Query: 555 QPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
Q R +L F+ A +L+ATDVA+RGLDI + VIN+ P +E Y+H
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVH 128
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = -1
Query: 567 GAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
G+ Q +RL+++++ + +L++TD+ ARG+D VN V+N +P E Y+H
Sbjct: 246 GSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLH 300
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -1
Query: 594 LGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 415
LG +H +Q R FR+ LV +D+ RG+DI VN VINF P E
Sbjct: 314 LGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSE 373
Query: 414 HYIH 403
Y+H
Sbjct: 374 TYLH 377
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -1
Query: 594 LGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 415
LG +H +Q R FR+ LV +D+ RG+DI VN VINF P E
Sbjct: 314 LGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSE 373
Query: 414 HYIH 403
Y+H
Sbjct: 374 TYLH 377
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Frame = -1
Query: 591 GVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLP----- 427
G A L G QR+ L+RFR + +L+ T+V+ARG+D+ V VIN+ +P
Sbjct: 368 GHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQG 427
Query: 426 -ATLEHYIHXXXXXXXXXXXXXXVS-LAGEGERNLVKSIVKRASKPVKSRQ 280
A E Y+H V+ + G+ N++K I + K ++ Q
Sbjct: 428 KADFETYLHRIGRTGRFGKSGIAVNFIDGQRSMNIMKKIEEHFGKKIQHLQ 478
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -1
Query: 573 LHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
+H Q +RL ++F+ + +LVAT++ RG+DI VN V N+ +P + Y+H
Sbjct: 365 IHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 421
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -1
Query: 573 LHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
LHG R FR+ ++ +LV TDV ARG+DIP VN VI + P++ ++H
Sbjct: 121 LHGKMKS-NRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVH 176
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -1
Query: 534 LKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 406
LK FR+ Q ++LVAT V GLD+P N V+ F P Y+
Sbjct: 137 LKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYV 179
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = -1
Query: 531 KRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYIH 403
++F+ + +LVAT++ RG+DI VN V N+ +P + Y+H
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 48
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -1
Query: 504 VLVATDVAARGLDIPGVNTVINFTLPATLEHYI 406
V+VAT G+DIP V+ +I+F +P+ +EHY+
Sbjct: 314 VVVATCALGMGVDIPDVDHIIHFGIPSEVEHYV 346
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1
Query: 603 LGMLGVKAAELHG--AXNQPQRLDS-LKRFREQQADVLVATDVAARGLDIPGVNTVINFT 433
L LG+ AA L+ A P + L+ FR Q +LV T+ RGLD ++ V
Sbjct: 445 LRYLGLNAAALYKQVAIPDPTKYHKFLRDFRTGQIQLLVGTEETVRGLDFKELDHVYLME 504
Query: 432 LPATLEHYIH 403
+P +E Y+H
Sbjct: 505 VPKNVEEYLH 514
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -1
Query: 594 LGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 415
L +A H + QR KRF + + AT GLD V +I++ +P + E
Sbjct: 811 LSWEAESYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFE 870
Query: 414 HYI 406
Y+
Sbjct: 871 SYV 873
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 477 RGLDIPGVNTVINFTLPATLEHYIH 403
RG+DI VN VINF P E Y+H
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLH 29
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 477 RGLDIPGVNTVINFTLPATLEHYIH 403
RG+DI VN VINF P E Y+H
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLH 29
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -3
Query: 214 QFSXEEYAEKQMN-KMEKQTAKLEVVLKKDEAQPGPQH-EPQRQRDWFQTPKQKREEKER 41
Q E+ A+K+ K K+ KLE KK E + + E +R+++ Q K+K++E+
Sbjct: 291 QEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKEKQKERRE 350
Query: 40 LALTTHVGKKKKK 2
H KK+K+
Sbjct: 351 KEKQKHQEKKEKE 363
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTH 23
EE K+ K+EK K E + ++ + Q +++++ + K+K EKER+
Sbjct: 284 EEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKE 343
Query: 22 VGKKKKK 2
K++++
Sbjct: 344 KQKERRE 350
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERL 38
E+ EK+ + EK+ K +K + Q + E QR+++ + KQK E++ L
Sbjct: 330 EKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQKELERKEL 384
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/57 (24%), Positives = 34/57 (59%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLAL 32
E+ E++ +++++ K + +K++ + + E +RQR+ + K+K++E ER L
Sbjct: 328 EKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQKELERKEL 384
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 33.1 bits (72), Expect = 0.27
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Frame = -3
Query: 322 IDSQTRVQTGQIQTNTARYRRQIXGXXXXXXXXXXSQ---FSXEEYAEKQMNKMEK---- 164
ID+ ++TG+ TN A+Y +Q ++ EE A+K+ +ME+
Sbjct: 721 IDTHRALKTGR--TNKAQYSEATNIYREPYLIQEKTQRLKYAIEEKAKKERERMEQLEIQ 778
Query: 163 QTAKLEVVLKKDEAQPGPQHE--PQRQRDWFQTPKQKREEKERLALTTHVGKKKKK 2
+ K+E KK E + E +RQR+ + KQ E+ + ++ T KKKK+
Sbjct: 779 RQKKVEEQKKKREEKEKRVAELRAERQRELMEKKKQLLEKDKLISTLTEKAKKKKE 834
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 591 GVKAAELHG-AXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLE 415
G + + HG + ++++ +K+F+ + A L+AT+ G VN V + P TL
Sbjct: 1066 GATSLKYHGKGLTENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLT 1125
Query: 414 HYI 406
++
Sbjct: 1126 SWV 1128
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 193 AEKQMNKMEKQTAK-LEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTHVG 17
++KQ+ +++ AK +E + + E + + E ++QR + KQKR E+ER+
Sbjct: 124 SKKQLLAEQRRRAKEMEQIAMELEEKRKEEEEKEKQRKQLEVEKQKRLEEERIRSQNEER 183
Query: 16 KKKKK 2
K++++
Sbjct: 184 KRRER 188
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -1
Query: 585 KAAELHGAXNQPQRLDSLKRFREQQADVLVATDVA 481
+ A LHG +Q +R L +F++++ +LVATDVA
Sbjct: 755 EVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.5 bits (68), Expect = 0.84
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = -1
Query: 474 GLDIPGVNTVINFTLPATLEHYI 406
G+DIP V+ +I++ +P+ +EHY+
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYV 24
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQ--KREEKER 41
+E E + E TAK + V KD+ QPG + P +D QT Q KRE++ +
Sbjct: 223 DEEDESEDEVAEALTAKKKAVTPKDKKQPGKKETP-AGKDCLQTRNQALKREKESK 277
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQP-GPQHEPQRQRDWFQTPKQKREEKERLALTT 26
+E ++ ++ E+Q A LE +++E Q Q E +RQ +W + K +R+++ T
Sbjct: 1101 KEEQQRLRDEEEQQRAWLEKKFQREENQQLRQQKEEERQTEWLEQQKLQRKQES----TR 1156
Query: 25 HVGKKKKK 2
+ +KK++
Sbjct: 1157 EISRKKEE 1164
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 558 NQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPAT 421
+Q ++L+ + RFR + LV+T V GLDI V+ ++ F A+
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHAS 610
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 591 GVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGL 469
G+ L+G Q +R+ F ++ VL ATD+AARGL
Sbjct: 299 GIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 567 GAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINF 436
G Q Q L ++ F++ ++L+AT VA GLDI + VI +
Sbjct: 981 GMSQQEQEL-IIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRY 1023
>SB_815| Best HMM Match : Ribosomal_60s (HMM E-Value=0.14)
Length = 443
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +1
Query: 289 FDRFGRAFDYRFDQIPLALAGERDGHPGATRPGCATHPVYIMF*GGRQREVDD 447
F G D FD + L G G P GC+THP GG Q E+ D
Sbjct: 284 FSNHGMMSDEYFDSL---LEGSAAGLPAVESLGCSTHPAGTAT-GGEQTEIAD 332
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTH 23
E EK+ ++ K E +K+E + + + + W Q +K E E+ A T
Sbjct: 10 EGETEKEGETEKEAETKKEAETEKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAETEK 69
Query: 22 VGKKKKK 2
+K+KK
Sbjct: 70 EAEKEKK 76
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -1
Query: 597 MLGVKAAELHGAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVI 442
+ G++ LH + ++ + RF + ++ VL++T V G+D+P ++
Sbjct: 90 LAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMV 141
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 567 GAXNQPQRLDSLKRFRE-QQADVLVATDVAARGLDIPGVNTVINFTL 430
G Q ++ + + +FR + ++++AT VA GLDI + VI + +
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDM 643
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKD----EAQPGPQHE-PQRQRDWFQTPKQKREEKERL 38
EE M K+EK+ AK + +++ EA Q E Q+Q W Q ++++ KERL
Sbjct: 1142 EEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQKQAAWRQQEEEEQRVKERL 1201
Query: 37 AL 32
+
Sbjct: 1202 QI 1203
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQR-DWFQTPKQKREEKERLA 35
EE KQ + K+ ++E+ +K+E + + E +R+R + + +Q + EK+RLA
Sbjct: 616 EERKRKQEEEERKRKMQMELQRRKEEEEQKKRDEEERKRREKEEKDRQFQLEKQRLA 672
>SB_30232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 139 LKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTHVGKKK 8
L ++E Q GP+H+P++Q T K K K LA + K +
Sbjct: 35 LDEEEVQKGPKHKPKKQNVKKPTVKAKTINKMFLAASAKSNKSE 78
>SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)
Length = 1296
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -1
Query: 567 GAXNQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEH 412
GA + QR+ ++R R ++ LV +D+AARGL V +++ +P ++H
Sbjct: 195 GANREGQRMRGVER-RARKRFALVLSDIAARGL----VQNILDEDIPDDVKH 241
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 573 LHGAXNQPQRLDSLKRFREQQADV--LVATDVAARGLDIPGVNTVINFTLPATLEHYI 406
LH + + L F +Q V L+AT G+D GV VI++ ++E YI
Sbjct: 324 LHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYI 381
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 322 IDSQTRVQTGQIQTNTARYRRQIXGXXXXXXXXXXSQFSXEEYAEKQMNKMEKQTAKLEV 143
I+SQ + + +IQ +A + Q Q + EKQ+ K K++ K+E+
Sbjct: 195 IESQRQRHSDEIQRISAEHEHQCAKLSQKIESLSSEQEEAIQDLEKQLKKANKESVKMEL 254
Query: 142 VLKKDE 125
L + E
Sbjct: 255 ALAEKE 260
>SB_53158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 292 DRFGRAFDYRFDQIPLALAGERDGHPGATRPGCATHPVYIMF*GGRQREVDD 447
+R G D F+ + L G+ GHP C+THP GG Q + D
Sbjct: 199 ERHGMMSDEYFESL---LEGDAAGHPAVKSLDCSTHPAGTAT-GGEQTGIAD 246
>SB_52326| Best HMM Match : M (HMM E-Value=0.38)
Length = 237
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -3
Query: 187 KQMNKMEKQTAKLEVVLKK-----DEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTH 23
+++ +E++ KLEV + K D+ + QR T K+ +EKE L TH
Sbjct: 52 EKIQALEERNKKLEVQVIKGKQAYDKVTRDQETMKQRTEALVSTIKEIEDEKESLIQETH 111
Query: 22 VGKKK 8
V K+K
Sbjct: 112 VFKRK 116
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 558 NQPQRLDSLKRFREQQADVLVATDVAARGLDIPGVNTVINFTLPATLEHYI 406
N+ L+S KR + VLVAT G+D GV+ I+F E +I
Sbjct: 214 NKDAILESFKRL-DGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFI 263
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = -3
Query: 187 KQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKERLALTTHVGKKK 8
K+ + EK+ E K+D A+ + + +++++ + + +E++E+LA KK
Sbjct: 253 KKFKEEEKERKLAEKKAKEDAAKAAAEEKERQRQEALEAERLAKEKEEQLAKEKATQAKK 312
Query: 7 KK 2
+K
Sbjct: 313 EK 314
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 136 KKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 41
+K+EA P QH + +R P+Q EE+ER
Sbjct: 297 RKEEADPPGQHHEEEERG-VHPPEQHHEEEER 327
>SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4)
Length = 224
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 103 EPQRQRDWFQTPKQKREEKERLALTTHVGKKKKK 2
E Q++RD F +QKR+E+++ + KK+++
Sbjct: 5 EQQKRRDKFLKMRQKRQEEDKAKKEAEMEKKRRR 38
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -3
Query: 202 EEYAEKQMNKMEKQTAKLEVVLKKDEAQPGPQHEPQRQRDWFQTPKQKREEKER 41
EE +++ ++EKQ K E +K+E + + + + + + +K+EEKE+
Sbjct: 2 EEKRKEEEKQLEKQR-KAEEEKRKEEQRKAEEEKQKEEAKRIEEENKKKEEKEK 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,934,948
Number of Sequences: 59808
Number of extensions: 292314
Number of successful extensions: 1349
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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