Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H20
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 142 7e-33
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 132 7e-30
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 122 1e-26
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 122 1e-26
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 120 4e-26
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 116 9e-25
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 113 5e-24
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 113 6e-24
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 111 1e-23
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 109 6e-23
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 109 6e-23
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 107 3e-22
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 103 7e-21
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 101 3e-20
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 92 2e-17
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 84 3e-15
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 79 2e-13
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 78 3e-13
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 77 5e-13
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 71 3e-11
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 70 6e-11
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 69 1e-10
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 68 2e-10
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 68 2e-10
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 66 7e-10
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 64 3e-09
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 64 5e-09
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 60 5e-08
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 60 8e-08
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 58 2e-07
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 57 4e-07
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 55 2e-06
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 54 3e-06
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 53 7e-06
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 53 9e-06
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 49 1e-04
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 48 2e-04
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 46 0.001
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 45 0.003
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 44 0.006
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 41 0.041
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 40 0.072
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 40 0.095
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 38 0.29
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 38 0.29
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 38 0.29
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 37 0.50
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 37 0.50
UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;... 36 0.88
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.88
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.88
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 36 0.88
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 36 1.2
UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon ... 36 1.5
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 35 2.0
UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3; Bacteria... 35 2.0
UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA... 35 2.7
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 35 2.7
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 35 2.7
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 34 3.6
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 34 4.7
UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1; Algoriph... 34 4.7
UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 4.7
UniRef50_Q2FL31 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 33 6.2
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 33 6.2
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 33 8.2
UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23; Bactero... 33 8.2
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 142 bits (345), Expect = 7e-33
Identities = 58/81 (71%), Positives = 70/81 (86%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQP+TEASYVN+P IALCNTDSPLR+VDIAIPCN K +HS+GLMWW+LAREVLR+R
Sbjct: 127 PRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMR 186
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G + R+ W+V+ DL+FYR P
Sbjct: 187 GTISREHPWEVMPDLYFYRDP 207
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
RA+VAIENP D + F G T IAGRFTPG FTNQIQAAFRE RLL
Sbjct: 63 RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLL 122
Query: 610 IVLDP 596
+V DP
Sbjct: 123 VVTDP 127
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 132 bits (320), Expect = 7e-30
Identities = 55/78 (70%), Positives = 66/78 (84%)
Frame = -3
Query: 588 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 409
DHQPITEA+YVNIPVIA CNT+SPLR++D+AIPCN +S+GLMWWLL REVLRLRG +
Sbjct: 130 DHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTI 189
Query: 408 PRDQRWDVVVDLFFYRXP 355
R+ W+V+ DLFFYR P
Sbjct: 190 SRELPWEVMPDLFFYRDP 207
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/64 (53%), Positives = 36/64 (56%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R + AIENP D + P F G IAGRFTPG FTNQIQ AFRE RLL
Sbjct: 63 RVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLL 122
Query: 610 IVLD 599
IV D
Sbjct: 123 IVSD 126
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 122 bits (294), Expect = 1e-26
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQP+ EASYVN+P IALCNTDSPL +VDIAIPCN K +HS+G+MWW+L EV R+
Sbjct: 207 PRVDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMWWMLVPEVRRIS 266
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G + R+ W+V+ D FYR P
Sbjct: 267 GTISREHPWEVMTDPCFYRDP 287
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/65 (49%), Positives = 36/65 (55%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
RA+ AIEN D + F G T IAG FTPG FT+QIQAAFRE RL
Sbjct: 143 RAIAAIENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLP 202
Query: 610 IVLDP 596
+V DP
Sbjct: 203 VVTDP 207
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 122 bits (294), Expect = 1e-26
Identities = 55/81 (67%), Positives = 62/81 (76%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q EAS VNIPVIA C+TD+PL FVDIAIPCN + +SI +M+WLLAREVLRLR
Sbjct: 147 PRTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLR 206
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G +PR WDV VDLFFYR P
Sbjct: 207 GTIPRSVPWDVKVDLFFYRDP 227
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R + A+ENP D F + G + +AGRF PG FTNQIQ F + R+L
Sbjct: 83 RVIAAVENPQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVL 142
Query: 610 IVLDPCT 590
+V DP T
Sbjct: 143 LVTDPRT 149
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 120 bits (289), Expect = 4e-26
Identities = 51/81 (62%), Positives = 62/81 (76%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQPI E + NIP+IA C+TDSP+RFVDI IP N K HSIG ++WLLAR VL++R
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G + Q+WDV+VDLFFYR P
Sbjct: 191 GTIAAGQKWDVMVDLFFYREP 211
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R +VAIENP D P F + G IAGR TPG FTNQ+Q +F E RLL
Sbjct: 67 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLL 126
Query: 610 IVLDPCT 590
I+ DP T
Sbjct: 127 ILTDPRT 133
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 116 bits (278), Expect = 9e-25
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EASYVNIPVIAL + DSP FVD+AIPCN + HSIGL+W+LLAREVLRLR
Sbjct: 126 PRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLR 185
Query: 417 GVL-PRDQRWDVVVDLFFYRXP 355
G L R Q W ++ DL+FYR P
Sbjct: 186 GALVDRTQPWSIMPDLYFYRDP 207
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/65 (44%), Positives = 33/65 (50%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R + AI NP D F G T IAGRFTPG FTN I +F+E RL+
Sbjct: 62 RIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLV 121
Query: 610 IVLDP 596
IV DP
Sbjct: 122 IVTDP 126
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 113 bits (272), Expect = 5e-24
Identities = 54/81 (66%), Positives = 61/81 (75%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EAS+VNIPVIALC+TDS L VDIAIP N K SIGL+W+LLAREVLR+R
Sbjct: 129 PRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVR 188
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G L R WDV+ DL+FYR P
Sbjct: 189 GTLSRSAPWDVMPDLYFYRDP 209
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/65 (43%), Positives = 32/65 (49%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R + IENP D F G T IAGRFTPG FTN I +RE RL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 610 IVLDP 596
+V DP
Sbjct: 125 VVTDP 129
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 113 bits (271), Expect = 6e-24
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + E+SYV++PVIALC+TDSPL +VDIAIPCN K SI LM+WLLAREVL LR
Sbjct: 127 PRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLR 186
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
L R WDV+VD FF+R P
Sbjct: 187 DQLKRWMPWDVLVDTFFWRDP 207
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
RA+V + NP + P S F G IAGR+ PG TNQI F E RLL
Sbjct: 63 RAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLL 122
Query: 610 IVLDPCT 590
+ DP T
Sbjct: 123 VATDPRT 129
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 111 bits (268), Expect = 1e-23
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++WLLAR VL++R
Sbjct: 49 PRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMR 108
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G + +WDV+VDLFFYR P
Sbjct: 109 GTILPGHKWDVMVDLFFYRDP 129
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 109 bits (263), Expect = 6e-23
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EASYVNIP I+LCN+D+ L+F+D+AIPCN K+ SIGL++WLLAREVLRL+
Sbjct: 132 PVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLK 191
Query: 417 GVLPRDQRWDVVVDLF 370
G + R + WDV DLF
Sbjct: 192 GSISRTEEWDVKPDLF 207
Score = 40.3 bits (90), Expect = 0.054
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R +V I++P + + P F + T GRF PG FTN++ + E RLL
Sbjct: 68 RILVTIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLL 127
Query: 610 IVLDP 596
+V DP
Sbjct: 128 LVNDP 132
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 109 bits (263), Expect = 6e-23
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EA+Y NIP IALC+TD+ L +VD IPCNTK+ +S+GL+ WLL REVLRLR
Sbjct: 125 PNTDSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLRLR 184
Query: 417 GVLPRDQRWDVVVDLFFYR 361
G L R Q W V+ DLFFYR
Sbjct: 185 GALTRTQEWSVLPDLFFYR 203
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R + A+E P D + F G + RFTPG FTN F E RL+
Sbjct: 61 RMIYAVEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLM 120
Query: 610 IVLDPCT 590
IV DP T
Sbjct: 121 IVCDPNT 127
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 107 bits (257), Expect = 3e-22
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D QPI+E ++VNIP IA C+TDSPL+ VDIAIP N K+ SIG +++LLAR VL++R
Sbjct: 150 PRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMR 209
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G + WDV+VDLFFYR P
Sbjct: 210 GTISPANPWDVMVDLFFYRDP 230
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R +VA+ENP D P F + G +AGR TPG +TNQ A F E R+L
Sbjct: 86 RVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVL 145
Query: 610 IVLDPCT 590
+V DP T
Sbjct: 146 VVTDPRT 152
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 103 bits (246), Expect = 7e-21
Identities = 46/79 (58%), Positives = 61/79 (77%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EASYVNIPVIAL N+D+PL++VDI IP + + SI +++WLLAREV LR
Sbjct: 156 PHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLAREVKILR 215
Query: 417 GVLPRDQRWDVVVDLFFYR 361
G L +D+ WDV+VDLF+++
Sbjct: 216 GELNKDEEWDVLVDLFYHK 234
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPR-TXGXTXIAGRFTPGXFTNQIQAA---FRE 623
R + AIE P D P F T + + R+TPG TNQ +A F+E
Sbjct: 88 RVIAAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQE 147
Query: 622 XRLLIVLDP 596
+LLIV DP
Sbjct: 148 PQLLIVTDP 156
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 101 bits (241), Expect = 3e-20
Identities = 48/79 (60%), Positives = 56/79 (70%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQP+ E S VNIPVI CNTDSPL+ VDI IPCN +SI LM W+LAREV R+
Sbjct: 127 PKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALMLWMLAREVRRIW 185
Query: 417 GVLPRDQRWDVVVDLFFYR 361
G+ PR Q DV++DLF R
Sbjct: 186 GLDPRSQPGDVIMDLFLMR 204
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/65 (50%), Positives = 38/65 (58%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
RA+ AIENP D P+ F G T + GRFTPG FTNQIQ+ F+E RLL
Sbjct: 63 RAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLL 122
Query: 610 IVLDP 596
IV DP
Sbjct: 123 IVCDP 127
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 91.9 bits (218), Expect = 2e-17
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DHQPI E + NIP IA C+ DSP+R+VDI I N K H+IG ++WLL VL +R
Sbjct: 78 PITDHQPIKEVALGNIPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMR 137
Query: 417 GVLPRDQRWDVVVDLFF 367
+ +WDV+VDLFF
Sbjct: 138 HTIALGHKWDVMVDLFF 154
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDPCT 590
F + G IAGR TPG TNQ+Q +F E LLI+ DP T
Sbjct: 41 FAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPIT 80
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EASYVNIPVI++CNTDS L ++DIAIP N K +S L+ WLL +++L +
Sbjct: 120 PLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALIIWLLTKKILIFK 179
Query: 417 GVLPRDQRWDVVVDLF 370
G L ++ W+V V+ F
Sbjct: 180 GELTKNCEWNVSVESF 195
Score = 33.9 bits (74), Expect = 4.7
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
RA+++IE+P F + I ++ PG TN+ F E RLL
Sbjct: 56 RAIISIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLL 115
Query: 610 IVLDP 596
I+ DP
Sbjct: 116 IISDP 120
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 78.6 bits (185), Expect = 2e-13
Identities = 30/60 (50%), Positives = 48/60 (80%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D+ I E+SYVN+PVIA+CN+D+ L++VD AIPCN ++++SI ++W+LL + VL ++
Sbjct: 31 PRTDYNAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 682 IAGRFTPGXFTNQIQAAFREXRLLIVLDPCT 590
+ GR++PG TNQ + E RLLIV DP T
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRT 33
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EA + IPVIALC+TDSP+ VD+ IP N + ++ L++WLLAREVLR+R
Sbjct: 128 PRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLRIR 187
Query: 417 GVLP 406
G +P
Sbjct: 188 GDIP 191
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/81 (49%), Positives = 52/81 (64%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EAS IPVIAL +TDS F+D+ IPCN K +S+ L++WLLAR+VLR R
Sbjct: 131 PKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRER 190
Query: 417 GVLPRDQRWDVVVDLFFYRXP 355
G L ++ D+ V +R P
Sbjct: 191 GELKPNE--DLPVSWEEFRVP 209
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -3
Query: 462 GLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 355
GL+WWLLAREVLRLRG++PR+ +W+VVVDLFFYR P
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRDP 36
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q I EA+ V IP++A +TD+ + ++D+ IP N K S+ L++W LAR++LR R
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRER 209
Query: 417 GVLPRDQRWDVVVDLFFYR 361
V+P D V V F R
Sbjct: 210 RVIPPDGDLAVPVSEFEMR 228
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDPCT 590
F G + GR PG FTN + + E ++L+V DP T
Sbjct: 113 FAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRT 152
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 68.9 bits (161), Expect = 1e-10
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -3
Query: 471 HSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 355
HSIGLMWW+L+REVLRLRG + RD W+++VDL+F+R P
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDP 86
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 68.1 bits (159), Expect = 2e-10
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = -3
Query: 480 KSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 355
K +HS+GL+WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 42
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EA + IP+IALC+ ++ FVD+ IP N K S+ +++WLLARE+L+ R
Sbjct: 120 PLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNR 179
Query: 417 GVLPRDQRWDVVVDLF 370
G + ++ +D F
Sbjct: 180 GTITSYDQFKYTIDDF 195
Score = 37.5 bits (83), Expect = 0.38
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
F G T I GRF PG TN ++E +++IV DP
Sbjct: 83 FAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D + +A I ++ALC+T+ ++D IP N + S S+ L++W+LARE LR R
Sbjct: 118 PIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNR 177
Query: 417 GVLPRDQRWDVVVDLF 370
GV+ +D++ V V+ F
Sbjct: 178 GVIGKDEQLKVPVEEF 193
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRL 421
PA D Q + EAS + +PV+ALC+T++ VD+ IP N K ++ L++WLLAREV RL
Sbjct: 151 PAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRL 209
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EA+ + +P++ LC+T+ F+D+ IP N K ++ L+++LL RE L+ R
Sbjct: 121 PRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNR 180
Query: 417 GVLPRDQR 394
GV+ D +
Sbjct: 181 GVITDDTK 188
Score = 33.9 bits (74), Expect = 4.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
F + G +AGRF PG TN F E ++ + DP
Sbjct: 84 FGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDP 121
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = -3
Query: 582 QPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 403
QP + YVN+P IAL + DS DIA PCN K HS+GLM W+LA E L
Sbjct: 85 QPSLASQYVNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEALSFLNT--H 141
Query: 402 DQRWDVVVDLFFYRXP 355
+ W D++FYR P
Sbjct: 142 EWSWP---DVYFYRDP 154
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q +TEA+ IPVI + N+D+ +D+ IP N + ++ ++WLLAREVL +R
Sbjct: 124 PQVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIR 183
Query: 417 GVLPRDQRWDVVVDLF 370
G + + +D F
Sbjct: 184 GEVDETKPMKYEIDDF 199
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D Q + EA V IPVIA+C++++ VD+ +P N K ++ +++WLLA E L R
Sbjct: 193 PIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRR 252
Query: 417 GVLP 406
G P
Sbjct: 253 GAEP 256
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = -2
Query: 790 RAVVAIENPXDGXXXHHGPSVSVLY*XFPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLL 611
R +VAIENP D P F + G IAGR TPG FTNQ+Q +F E RLL
Sbjct: 64 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLL 123
Query: 610 IVLDPCT 590
I+ DP T
Sbjct: 124 ILTDPRT 130
Score = 35.1 bits (77), Expect = 2.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 423 LRGVLPRDQRWDVVVDLFFYRXP 355
+RG + +WDV+VDLFFYR P
Sbjct: 161 MRGTILPGHKWDVMVDLFFYRDP 183
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P DH + EA YVN+ IAL N+ SPL + IAIP ++K +H++G WLLA VL
Sbjct: 108 PRADHPFLMEAPYVNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVGRRKWLLAWGVLHAC 167
Query: 417 G 415
G
Sbjct: 168 G 168
Score = 37.9 bits (84), Expect = 0.29
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 694 GXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
G + G FT G FT+Q+QA+ RE LL++ DP
Sbjct: 76 GASPTVGHFTSGTFTSQVQASCRELCLLLITDP 108
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3
Query: 453 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 355
WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 33
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLR 424
P D + I E S +NIP+I +CNTD+ + F+D +P NT S S ++++L+ R + R
Sbjct: 119 PKNDPRIIRELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYLIGRLLKR 176
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = -3
Query: 588 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV--LRLRG 415
D Q I E+ Y N+P IA NTD+ L VDIAIP N +S +I +++L+R + ++
Sbjct: 135 DKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTGA 194
Query: 414 VLPRDQRWDVVVDLFFYR 361
L RD + V+LF +R
Sbjct: 195 ELVRDMK---EVELFLFR 209
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLD 599
F G T I GRF PG FTN + R+LIV D
Sbjct: 95 FCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSD 131
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
F + G T +AGRFTPG FTNQIQ F E RL+IV DP
Sbjct: 101 FMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSDP 138
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 490
P+ DHQ + E+ Y+N+P I N+D+ L+ V IAIP
Sbjct: 138 PSVDHQALRESGYINVPTIGFWNSDNRLKNVGIAIP 173
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -2
Query: 694 GXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
G IAG FTPG FTNQIQAAF E + L+V DP
Sbjct: 53 GAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDP 85
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D I EA +NIPVIAL NT++ + +D IP N S SI L+ +LA + L
Sbjct: 218 PVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAELH 277
Query: 417 G 415
G
Sbjct: 278 G 278
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P ++ +TEA + IPVIALCNT+S + + IP N + S+ L+ LL V +
Sbjct: 209 PIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDAVALAQ 268
Query: 417 G 415
G
Sbjct: 269 G 269
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -3
Query: 510 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 355
FVDIAIP N + HS+ ++W LL R VLRL+G ++ +FFY P
Sbjct: 112 FVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG-----GDLSMMPGMFFYHDP 158
Score = 39.5 bits (88), Expect = 0.095
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDP 596
F G IA RFTPG TN + F+E R++IV+DP
Sbjct: 63 FAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDP 100
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P + + EA+ + IPV+ALCNT++ VD IP N S L+ LLA V +
Sbjct: 181 PVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAK 240
Query: 417 GV 412
+
Sbjct: 241 AM 242
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -3
Query: 576 ITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 403
I EA + IPVIA+CNT++ VD IP N S S+ L+ LL V +G LP+
Sbjct: 278 IKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLCDAVAEAKG-LPK 334
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 40.7 bits (91), Expect = 0.041
Identities = 31/98 (31%), Positives = 38/98 (38%)
Frame = -2
Query: 709 FPRTXGXTXIAGRFTPGXFTNQIQAAFREXRLLIVLDPCTRPSTHY*SFICQHSCDCFVQ 530
F G T IAG FTPG F + + L L P S + H +
Sbjct: 4 FAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLLYAT 63
Query: 529 HRLPTKICGHCYPMQHQVFPLYWFDVVVVGT*SAEASW 416
L I GHC+ MQ Q L DVV G S+ +W
Sbjct: 64 QILLCAI-GHCHHMQQQGSSLSGSDVVDAGLGSSAHAW 100
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.9 bits (89), Expect = 0.072
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
P ++H + EA + IPVIA+C+T+ +D IP N +S SI ++
Sbjct: 167 PKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDTSRSIAII 214
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 39.5 bits (88), Expect = 0.095
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 436
P ++ I E IP I LC+TD + IPCN S S+ LM ++++
Sbjct: 381 PVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSK 434
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 37.9 bits (84), Expect = 0.29
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 439
++H + EA + IPV+A+ +T+S VD AIP N + SI L L+A
Sbjct: 168 KEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVA 218
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 37.9 bits (84), Expect = 0.29
Identities = 20/72 (27%), Positives = 43/72 (59%)
Frame = -3
Query: 639 KLHSVNXVS*LYWTPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG 460
K + +N + L + +++ +TE ++ NIP+I L NT+S + +++ I NTK+ S+
Sbjct: 128 KHNKINLII-LLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPIFSNTKNLKSLF 186
Query: 459 LMWWLLAREVLR 424
+ +L+ + L+
Sbjct: 187 FLIYLIRKTFLK 198
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 37.9 bits (84), Expect = 0.29
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -3
Query: 585 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 493
+QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 77 YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
P D + EA +NIPVI LC+T+ V + IP N S+ +M
Sbjct: 168 PKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 37.1 bits (82), Expect = 0.50
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 436
P ++ I E IP I LC+TD + IPCN S + LM +L++
Sbjct: 371 PVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGILSK 424
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 37.1 bits (82), Expect = 0.50
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P D + EA + +I + ++D+ FVD+ IP N S SI L+ +LA ++ +
Sbjct: 185 PNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLILTVLADAIVNAK 244
Query: 417 G 415
G
Sbjct: 245 G 245
>UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 136
Score = 36.3 bits (80), Expect = 0.88
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 364 VEEQINHNIPALVTGKHTTKPQHFTCQQPPHQ 459
VE I H++P + TG T Q+F Q PPHQ
Sbjct: 103 VEVGIRHDLPRVFTGNGATHAQNFLSQHPPHQ 134
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.88
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 585 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 493
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.88
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 585 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 493
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 36.3 bits (80), Expect = 0.88
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P ++ + EA+ + IPVIAL +TDS +D +P N + SI L+ + ++ R
Sbjct: 166 PTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRVGDLLVEAR 225
Query: 417 G 415
G
Sbjct: 226 G 226
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
++H ++EA +NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 168 KEHIAVSEALKLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon
luteolum DSM 273|Rep: Ribosomal protein S2 - Pelodictyon
luteolum (strain DSM 273) (Chlorobium luteolum (strain
DSM273))
Length = 253
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV 412
++H I EA + IP+ A+ +T+ VD IP N + SI LM +A V+ R +
Sbjct: 168 KEHIAIKEARSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLMVKAVADTVVNARAM 227
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 228 RYRPACCTRCSSCFWST-PC--SRRMVCPGTR*VEHNCRRTSRRH 103
+ RP CTRC CF+ T C S R + G+ EHNCRR H
Sbjct: 367 KQRPLQCTRCY-CFYDTRACRSSERCISCGSSKQEHNCRRGGAVH 410
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 436
P ++ + EA +P IA+ +TDS V IP N S S+ + +LAR
Sbjct: 325 PTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLAR 378
>UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3;
Bacteria|Rep: 30S ribosomal protein S2 - Chlorobium
tepidum
Length = 249
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
++H + EA + IP+ A+ +T+ VD IP N + SI LM +A +L R
Sbjct: 169 KEHIAVKEARSLGIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLMVKAVADTILEAR 226
>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11321-PA, isoform A - Tribolium castaneum
Length = 2084
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 210 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRR 118
C +CSS F + P RR+VCP + V NCRR
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRR 1818
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV 430
++H + EA +NIPVIA+ +T+ VD IP N + S L+ ++A V
Sbjct: 168 KEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAV 221
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P ++ + EA +NIP++A+ +T++ +D+ IP N + ++ L+ +A V+ R
Sbjct: 166 PRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAVIEGR 225
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 475
P+++ + I EA +NIPVIA+ ++D+ L + IP N S
Sbjct: 170 PSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 576 ITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 457
+TEA+ + +PVIA+ +T+ VD IP N SS ++ L
Sbjct: 172 VTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1;
Algoriphagus sp. PR1|Rep: 30S ribosomal protein S2 -
Algoriphagus sp. PR1
Length = 253
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
++H I EA + IPV AL +T+S V+ IP N + S+ L+
Sbjct: 168 REHIAIAEAKKLGIPVYALVDTNSNPNEVEFPIPANDDAFKSVSLL 213
>UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 523
Score = 33.9 bits (74), Expect = 4.7
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 134 STHLVPGQTILLEQGVLQKQELQRVQQAGRYLQPMKPLAPVF 259
S+H V L+E G+ Q + L+RV Q+GR++Q + PLA F
Sbjct: 431 SSHEVALDLSLMEYGIYQ-EALERVLQSGRFVQQVAPLAERF 471
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 418
P+++ I+E +NIP I + +T+ + V++ IP N S +I L+ L+ + + +
Sbjct: 165 PSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLSTSIFKAK 224
>UniRef50_Q2FL31 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 513
Score = 33.5 bits (73), Expect = 6.2
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Frame = +2
Query: 368 KNKSTTTSQRWSRGSTPRSLSTSRANNH---------HIKPIEWEDLVLH--GIAMSTNL 514
K K+ + SQR+S PR++ T+ + H +I PIE D+ + I + +N
Sbjct: 7 KKKTLSISQRYSSSEPPRTILTNESTAHPHKFSIGLKNIGPIESGDITIKPCTIIIGSNR 66
Query: 515 SGESVLHKAITGMLTYEASVMG*WSCAGVQYNQ 613
SG+S + K I M + + + +S QY Q
Sbjct: 67 SGKSYIAKIIYAMYSLQNDLY--YSTGSFQYFQ 97
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 33.5 bits (73), Expect = 6.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 439
++ + EA +NIP+++L +T+ D+ IP N + SI L+ LA
Sbjct: 168 REQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVGKLA 218
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 597 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
P + + EA + IPV+AL +T+ ++ IPCN S SI L+
Sbjct: 168 PGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLI 215
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 609 LYWTPAQDHQPITEASYVNIPVIALCNTDSPLRFV 505
++ P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 371 IFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23;
Bacteroidetes|Rep: 30S ribosomal protein S2 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 281
Score = 33.1 bits (72), Expect = 8.2
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -3
Query: 591 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 454
++H + EA+ + IPV A+ +T+S +D IP N + +I L+
Sbjct: 168 KEHIAVREANRLGIPVFAMVDTNSDPSLIDYVIPSNDDALKAIELI 213
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,600,363
Number of Sequences: 1657284
Number of extensions: 12362865
Number of successful extensions: 28794
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 27779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28762
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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