BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H18 (804 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.4 SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 5.5 SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5 SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.2 SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.5 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 9.5 SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 9.5 SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.5 >SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 570 Score = 28.3 bits (60), Expect = 1.4 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 106 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 234 R +A Y+ + LGG++ S+ EK F + N DV+ + G Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154 >SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosaccharomyces pombe|chr 1|||Manual Length = 745 Score = 27.1 bits (57), Expect = 3.1 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = -1 Query: 261 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 166 CY P + + L ++I+T+L DN ++ A++ Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 26.2 bits (55), Expect = 5.5 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -2 Query: 716 SHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPL-SSEAPS 549 S PP+R + P + PP + P PS P AP PPL +S APS Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPS 1742 >SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 26.2 bits (55), Expect = 5.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 472 KLRALLVVIPRILRSPPPTHPLIEDV 395 KLR++L I ++LR P P PL+ + Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130 >SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 868 Score = 25.8 bits (54), Expect = 7.2 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 148 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 50 L++L +G SPC RL L +++P FW Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50 >SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 25.4 bits (53), Expect = 9.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 477 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 391 + SF PY S F A P L ++PS+ +S Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 25.4 bits (53), Expect = 9.5 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -2 Query: 683 PDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSL 525 P P S +PP + P PSIP +P PP+ S+AP PSSL Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIP------PPSPASAPPIPSKAPP---IPSSL 171 >SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity |Schizosaccharomyces pombe|chr 1|||Manual Length = 408 Score = 25.4 bits (53), Expect = 9.5 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -3 Query: 727 LMHQATLPCDXGYINPIIKSPIPYTNHP 644 + HQA L C GY + + +P+ N P Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375 >SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 488 Score = 25.4 bits (53), Expect = 9.5 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 121 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 222 ++Q A+ LG RS RC KSSF+ + DVV Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,903,596 Number of Sequences: 5004 Number of extensions: 56715 Number of successful extensions: 146 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 146 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 390427050 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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