BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H18 (804 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 31 4.9 AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 31 4.9 AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 31 4.9 AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 31 4.9 AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens ... 30 8.5 >BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. Length = 1235 Score = 31.1 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 668 PDSIHQPPQT*HPFP-SIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSL 525 P H P + PFP S+P F P L+PP S P+ + P++L Sbjct: 420 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466 >AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1 protein. Length = 1259 Score = 31.1 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 668 PDSIHQPPQT*HPFP-SIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSL 525 P H P + PFP S+P F P L+PP S P+ + P++L Sbjct: 420 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466 >AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. Length = 1011 Score = 31.1 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 668 PDSIHQPPQT*HPFP-SIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSL 525 P H P + PFP S+P F P L+PP S P+ + P++L Sbjct: 172 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 218 >AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. Length = 1266 Score = 31.1 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 668 PDSIHQPPQT*HPFP-SIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSL 525 P H P + PFP S+P F P L+PP S P+ + P++L Sbjct: 451 PHISHHPSAS--PFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 497 >AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens cDNA FLJ46594 fis, clone THYMU3045692. ). Length = 368 Score = 30.3 bits (65), Expect = 8.5 Identities = 17/66 (25%), Positives = 25/66 (37%) Frame = -3 Query: 724 MHQATLPCDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEXXXXXXXXXRCHQRLHQR 545 MH +T PC +I+P I + HP ++ H S + H +H Sbjct: 25 MHPSTHPCTHPFIHPCIHPSTHVSIHPSIHPCIHASIHPSIHPSVHPSMYPFIHSYIHPF 84 Query: 544 ISPPRH 527 I P H Sbjct: 85 IHPWIH 90 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 106,828,988 Number of Sequences: 237096 Number of extensions: 2289132 Number of successful extensions: 5040 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4835 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5032 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9924838204 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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