Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H18
(804 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 37 0.018
At3g24550.1 68416.m03083 protein kinase family protein contains ... 35 0.073
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 2.1
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 30 2.1
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 2.1
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 30 2.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 2.1
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 29 2.7
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 29 3.6
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 3.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 3.6
At4g20200.1 68417.m02953 terpene synthase/cyclase family protein... 29 4.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 6.3
At5g49080.1 68418.m06074 proline-rich extensin-like family prote... 28 8.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 8.3
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 28 8.3
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 28 8.3
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -2
Query: 728 PYASSHPP-LRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAP 552
PY+S P H+ + + P + P P + RR ++ P KP L + P
Sbjct: 24 PYSSHQTPQYNSPVHKHESSYSPKKYSPYYSASPLPPLQYRRQGPKYTPHPKPYLFNSPP 83
Query: 551 SAYLTPSSLGMXKGVSPPY 495
Y +PS K PPY
Sbjct: 84 PPYYSPSPKEDYKSPPPPY 102
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 34.7 bits (76), Expect = 0.073
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPG-LKPPLSSEAP 552
P ASS PP P +S PP + P PS+P PG L PPL +P
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP-PSLP-----PPSPPGSLTPPLPQPSP 82
Query: 551 SAYLTPS 531
SA +TPS
Sbjct: 83 SAPITPS 89
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 734 SRPYASSHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEA 555
S +A SH P H P H S P P P + +P P++ ++
Sbjct: 240 SPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPSPMTPQS 299
Query: 554 PSAYLTPS 531
PS +PS
Sbjct: 300 PSPVSSPS 307
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = -2
Query: 689 HQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 510
+ P HQ+P S H P HP +P R G PP S P ++ P S+GM G
Sbjct: 589 NMPHHQLPPSSHMPL---HPH-HLP--RPMQMPPHGHMPPPS--MPMSHQMPGSMGMQGG 640
Query: 509 VSPPYFQ 489
++P Q
Sbjct: 641 MNPQMSQ 647
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*H-PFPSIP*RRTRXE-FAPGLKPPLSSEA 555
P S PP P + P +H PP H P P P +P PP+ S
Sbjct: 563 PPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPP 622
Query: 554 PSAYLTPSSLGMXKGVSPP 498
P + P S SPP
Sbjct: 623 PPVFSPPPSQSPPVVYSPP 641
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 596 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 495
++AP KP + S P Y TPS K PPY
Sbjct: 44 KYAPHPKPYVKSSPPPQYYTPSPKVNYKSPPPPY 77
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPS 549
PY +S P++ R P ++ D+ PPQ P PS P ++P PP+ S P
Sbjct: 511 PYDAS--PVKNRRSPPPPKVEDTRVPPPQPPMPSPSPP----SPIYSP--PPPVHSPPPP 562
Query: 548 AYLTP 534
Y +P
Sbjct: 563 VYSSP 567
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -2
Query: 689 HQPDHQIPDSIHQPPQ---T*HPFP-SIP*RRTRXEFAPGLKPPLSSEAPSAYLTP 534
HQP HQ P PPQ + P P S+P ++ F+ P S PS Y P
Sbjct: 262 HQPYHQDPPKHMPPPQNYSSHEPSPNSLPNFQSYPSFSESSLPSTSPHYPSHYQNP 317
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 596 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 495
++AP KP + S P Y TPS K PPY
Sbjct: 50 KYAPHPKPYVYSSPPPPYYTPSPKVNYKSPPPPY 83
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 297 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 121
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 279 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLV 124
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRI 61
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*H-PFPSIP*RRTRXEFAPGLKPPLSSEAP 552
P S PP+ P H P +H PP H P P + ++P PP+ S P
Sbjct: 576 PVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPV--------YSPPPPPPVHSPPP 627
Query: 551 SAYLTP 534
+ P
Sbjct: 628 PVFSPP 633
>At4g20200.1 68417.m02953 terpene synthase/cyclase family protein
5-epi-aristolochene synthase, Nicotiana tabacum,
PATX:G505588
Length = 604
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 142 LGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRS*KVARGIEDVDSGAY 294
L G S+ + K +F LK+RP +V I+GR G ED S Y
Sbjct: 464 LAGIFMSMGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGY 514
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPS 549
P ++PP P P I+ P P P P + P S P
Sbjct: 522 PSVRAYPPPPPLSPPPPSPPPPYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPPPP 581
Query: 548 AY-LTPSSLGMXKGVSPPYFQ 489
Y TPS SPPY+Q
Sbjct: 582 KYEQTPSPREYYPSPSPPYYQ 602
>At5g49080.1 68418.m06074 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 609
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -2
Query: 668 PDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 495
P S Q PQ + FPS + ++ P KP + + P Y +PS K PPY
Sbjct: 24 PYSSPQTPQ--YNFPSH--QHKSPKYTPHSKPYIYNSPPPPYYSPSPKVNYKSPPPPY 77
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/65 (26%), Positives = 22/65 (33%)
Frame = -2
Query: 728 PYASSHPPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP*RRTRXEFAPGLKPPLSSEAPS 549
P S PP+ P H P +H PP H P +P P+ S P
Sbjct: 755 PVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPPP 814
Query: 548 AYLTP 534
+ P
Sbjct: 815 VFSPP 819
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 556 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 392
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 391 MATNQAIIDY 362
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 556 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 392
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 391 MATNQAIIDY 362
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,904
Number of Sequences: 28952
Number of extensions: 332509
Number of successful extensions: 1051
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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