Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H17
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 132 3e-31
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 4.9
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 28 6.4
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 132 bits (319), Expect = 3e-31
Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
Frame = -3
Query: 626 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 447
+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW
Sbjct: 117 KEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWW 176
Query: 446 LLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESEKDEQQA 324
+LARE+L LRG + R + +++ DL+FYRDP E+EK+E A
Sbjct: 177 MLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEETGA 222
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -1
Query: 775 IENPADXXVISSRPFGQRAVLKFAAHTRXYAYCGTFHTRC 656
+ENPAD V+S+RP+ QRA+LKFAAHT A G F C
Sbjct: 68 VENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGC 107
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2
Query: 693 GXTXIAGRFTPGAFTNQIQAAF 628
G T I GRF+PG TNQIQ F
Sbjct: 95 GATAIFGRFSPGCLTNQIQKTF 116
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 213 CCTRCGSCFWSTPCSRRMVCP 151
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 533 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 426
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 561 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 454
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
S +P + IL + +L K EP+R+++ L P V GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
S +P + IL + +L K EP+R+++ L P V GQE
Sbjct: 403 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 452
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
S +P + IL + +L K EP+R+++ L P V GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 134 STHLVPGQTILLEQGVLQKQEPQRVQQAGRYLQPMKPLAPVFHSSLHGQE 283
S +P + IL + +L K EP+R+++ L P V GQE
Sbjct: 462 SLQYIPFEHILSSRYLLTKYEPERIKELLSMLSPANMQVRVVSQKFKGQE 511
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 482 TKSSHSIGLMWWLLA 438
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,049,405
Number of Sequences: 27780
Number of extensions: 358510
Number of successful extensions: 1019
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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