BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H16 (808 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 33 0.048 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.0 SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.4 SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.8 SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.4 SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1 SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1 SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 4.1 SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5 SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 26 5.5 SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 26 7.2 SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual 26 7.2 SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 26 7.2 SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.6 SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.6 SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.6 SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 9.6 SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.6 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 33.1 bits (72), Expect = 0.048 Identities = 23/72 (31%), Positives = 30/72 (41%) Frame = -1 Query: 733 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPPDAVLEGVRAGVKASVVI 554 LA S S IS +ST N FH PT TS S A +GV + S+ + Sbjct: 790 LATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNL 849 Query: 553 RGSISVSHPLVT 518 + SV+ T Sbjct: 850 ESTSSVTSTAYT 861 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 28.7 bits (61), Expect = 1.0 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -2 Query: 708 SHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL-SSEAPS 541 S PP+R + P + PP + P PS P P AP PPL +S APS Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPS 1742 >SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 570 Score = 28.3 bits (60), Expect = 1.4 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +3 Query: 99 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 227 R +A Y+ + LGG++ S+ EK F + N DV+ + G Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154 >SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 857 Score = 27.9 bits (59), Expect = 1.8 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 9/58 (15%) Frame = -1 Query: 751 HXFAXLLAVSPLCIKPPSPAISXTSTRSSN---PRFHTPTTPD------LTSISINPP 605 H A ++V P + P P+IS T+T SS H PTTPD LT + PP Sbjct: 259 HGPAKQISVQPS--EHPKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPP 314 >SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces pombe|chr 3|||Manual Length = 587 Score = 27.5 bits (58), Expect = 2.4 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Frame = -2 Query: 663 IPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLT--PSSLGMXKGVSPP 490 +P + PP PFP P P PP AP +Y T S+L GVS P Sbjct: 525 VPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP---GAPGSYNTSESSNLNAPPGVSMP 581 >SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosaccharomyces pombe|chr 1|||Manual Length = 745 Score = 27.1 bits (57), Expect = 3.1 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = -3 Query: 254 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 159 CY P + + L ++I+T+L DN ++ A++ Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199 >SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 988 Score = 27.1 bits (57), Expect = 3.1 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -3 Query: 353 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 174 K K+ D V K + +S T+ +V + YF PF+ V+ +K + T Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664 Query: 173 LSASIQASLPSSEIYRQL 120 + + SSEI++ L Sbjct: 665 VDFVDYWTKSSSEIFKML 682 >SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizosaccharomyces pombe|chr 3|||Manual Length = 650 Score = 26.6 bits (56), Expect = 4.1 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = +3 Query: 471 HHSLENKGAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKS 635 H S NK A P P ++ P A TP+ SS A GL E++ KS Sbjct: 511 HTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSLQSSNAPVGLGEVESKS 565 >SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 26.2 bits (55), Expect = 5.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 464 KLRALLVVIPRILRSPPPTHPLIEDV 387 KLR++L I ++LR P P PL+ + Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130 >SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces pombe|chr 2|||Manual Length = 170 Score = 26.2 bits (55), Expect = 5.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 152 SLPSSEIYRQLVDSRHVSSDSFGVY 78 +L S I+R + S HVSS S GVY Sbjct: 2 TLLDSSIFRFRLSSLHVSSRSLGVY 26 >SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 1254 Score = 25.8 bits (54), Expect = 7.2 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 Query: 88 KESEETWRESTNWR*ISEEG 147 KE E W + NW+ SEEG Sbjct: 809 KEELEAWTRAFNWQKASEEG 828 >SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual Length = 130 Score = 25.8 bits (54), Expect = 7.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 131 YRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLV 33 YRQLVD R ++ D F + K+ LH + V Sbjct: 34 YRQLVDGRELTLDDFISHAKALRTHLHRLDINV 66 >SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 25.8 bits (54), Expect = 7.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +3 Query: 492 GAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKSGV 641 G + + CP T+G +EP++ A+TP+S G+ + GV Sbjct: 81 GGRVVHDCPTTKGIGYFLEPILILCLF--AKTPTSLTLTGVTSSNEDIGV 128 >SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 308 Score = 25.4 bits (53), Expect = 9.6 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 Query: 329 LVTHKELALKVSSIIGTRVYVFDPSCY 249 +V H E LKV II T Y D S Y Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63 >SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 277 Score = 25.4 bits (53), Expect = 9.6 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = -1 Query: 694 AISXTSTRSSNPRFHTPTTPDLTSISINPPDAVLEGVRAGVKASV 560 A+ ++ S F PTT S+SI+P + V+A V Sbjct: 69 AVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADV 113 >SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 25.4 bits (53), Expect = 9.6 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 469 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 383 + SF PY S F A P L ++PS+ +S Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330 >SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity |Schizosaccharomyces pombe|chr 1|||Manual Length = 408 Score = 25.4 bits (53), Expect = 9.6 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -3 Query: 719 LMHQATLPCDLGYINPIIKSPIPYTNHP 636 + HQA L C GY + + +P+ N P Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375 >SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 488 Score = 25.4 bits (53), Expect = 9.6 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 114 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 215 ++Q A+ LG RS RC KSSF+ + DVV Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,159,628 Number of Sequences: 5004 Number of extensions: 65065 Number of successful extensions: 228 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 225 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 392429240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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