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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H16
         (808 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    33   0.048
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    29   1.0  
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ...    28   1.4  
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    28   1.8  
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc...    27   2.4  
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc...    27   3.1  
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T...    27   3.1  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    27   4.1  
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac...    26   5.5  
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce...    26   5.5  
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb...    26   7.2  
SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual         26   7.2  
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha...    26   7.2  
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy...    25   9.6  
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p...    25   9.6  
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p...    25   9.6  
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ...    25   9.6  
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    25   9.6  

>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 33.1 bits (72), Expect = 0.048
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = -1

Query: 733  LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPPDAVLEGVRAGVKASVVI 554
            LA S       S  IS +ST   N  FH PT    TS S     A  +GV +    S+ +
Sbjct: 790  LATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNL 849

Query: 553  RGSISVSHPLVT 518
              + SV+    T
Sbjct: 850  ESTSSVTSTAYT 861


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -2

Query: 708  SHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL-SSEAPS 541
            S PP+R +   P      +   PP +  P PS P  P     AP   PPL +S APS
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPS 1742


>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 570

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 99  RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 227
           R +A  Y+  + LGG++ S+    EK  F  + N  DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
 Frame = -1

Query: 751 HXFAXLLAVSPLCIKPPSPAISXTSTRSSN---PRFHTPTTPD------LTSISINPP 605
           H  A  ++V P   + P P+IS T+T SS       H PTTPD      LT +   PP
Sbjct: 259 HGPAKQISVQPS--EHPKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPP 314


>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 587

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
 Frame = -2

Query: 663 IPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLT--PSSLGMXKGVSPP 490
           +P  +  PP    PFP  P  P          PP    AP +Y T   S+L    GVS P
Sbjct: 525 VPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP---GAPGSYNTSESSNLNAPPGVSMP 581


>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 745

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 254 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 159
           CY   P + + L ++I+T+L DN   ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199


>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 988

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = -3

Query: 353 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 174
           K K+ D   V  K   +  +S   T+ +V +   YF   PF+ V+       +K + T  
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664

Query: 173 LSASIQASLPSSEIYRQL 120
           +      +  SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +3

Query: 471 HHSLENKGAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKS 635
           H S  NK A    P P      ++  P     A TP+   SS A  GL E++ KS
Sbjct: 511 HTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSLQSSNAPVGLGEVESKS 565


>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
           Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 155

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 464 KLRALLVVIPRILRSPPPTHPLIEDV 387
           KLR++L  I ++LR P P  PL+  +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130


>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 170

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 152 SLPSSEIYRQLVDSRHVSSDSFGVY 78
           +L  S I+R  + S HVSS S GVY
Sbjct: 2   TLLDSSIFRFRLSSLHVSSRSLGVY 26


>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1254

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 88  KESEETWRESTNWR*ISEEG 147
           KE  E W  + NW+  SEEG
Sbjct: 809 KEELEAWTRAFNWQKASEEG 828


>SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 130

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 131 YRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLV 33
           YRQLVD R ++ D F  + K+    LH   + V
Sbjct: 34  YRQLVDGRELTLDDFISHAKALRTHLHRLDINV 66


>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 363

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 492 GAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKSGV 641
           G + +  CP T+G    +EP++       A+TP+S    G+   +   GV
Sbjct: 81  GGRVVHDCPTTKGIGYFLEPILILCLF--AKTPTSLTLTGVTSSNEDIGV 128


>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 308

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 329 LVTHKELALKVSSIIGTRVYVFDPSCY 249
           +V H E  LKV  II T  Y  D S Y
Sbjct: 37  VVKHHEEFLKVCDIISTFTYQLDASIY 63


>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 277

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 694 AISXTSTRSSNPRFHTPTTPDLTSISINPPDAVLEGVRAGVKASV 560
           A+   ++ S    F  PTT    S+SI+P  +        V+A V
Sbjct: 69  AVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADV 113


>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 469 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 383
           + SF PY S F A   P L ++PS+  +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330


>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 408

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 719 LMHQATLPCDLGYINPIIKSPIPYTNHP 636
           + HQA L C  GY + +    +P+ N P
Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 114 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 215
           ++Q A+ LG   RS  RC  KSSF+    + DVV
Sbjct: 33  LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,159,628
Number of Sequences: 5004
Number of extensions: 65065
Number of successful extensions: 228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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