BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H16 (808 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 34 0.16 SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36 SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 30 2.5 SB_24975| Best HMM Match : ET (HMM E-Value=1) 30 2.5 SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) 29 3.4 SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 3.4 SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4 SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9 SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 7.7 >SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) Length = 1918 Score = 33.9 bits (74), Expect = 0.16 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = -2 Query: 789 TSQLKESMXXHPFIXSXYYWRSRPYASSHP--PLRSRXHQPDHQIPDSIHQPPQT*HPFP 616 T ++ E++ P+ S + P + +P P R+ H S+ P + H P Sbjct: 38 TQEMSENVPTSPYKTSPFMPPQSPGSMQNPVSPHRTYQHNLPRGSQSSVPPSPHSYHSAP 97 Query: 615 SIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYF 484 S + PG P S + TPSS+ +SP +F Sbjct: 98 SPSRYAGPSAYMPGAISPSSGICTPSCATPSSVMSPGPISPDFF 141 >SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4072 Score = 32.7 bits (71), Expect = 0.36 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 3/106 (2%) Frame = -1 Query: 799 TTADVTVEGVNVXPPLHXFAXLLAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSI 620 T ++ T+ V FA +VSP P P I ST + + +T D Sbjct: 813 TDSESTIVPVTTVARESTFAPGTSVSPEITVAPGPTIGSESTVTRGATVASAST-DAPGT 871 Query: 619 SINPPDAVLEGVRAGVKASVVIRGSI---SVSHPLVTGHG*RGFAP 491 +++P V G+ A ++S+ ++ S + PL TG AP Sbjct: 872 TVSPESTVAPGIAAASESSITPGTTVLPESTAAPLTTGASESTVAP 917 >SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2437 Score = 30.3 bits (65), Expect = 1.9 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 585 FAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISR 442 FA P SS++PSA +P+S SP F + E + +IS+ Sbjct: 1096 FATTTMSPTSSQSPSAVTSPTSPRSPSNPSPASFGFHSEDEPVTMISK 1143 >SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) Length = 2442 Score = 29.9 bits (64), Expect = 2.5 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = -1 Query: 760 PPLHXFAXLLAVSPLCIKPPSPAIS-XTSTRSSNPRFHTPTTPDLTSISIN 611 P L + +A++ + ++PP PAIS S +S +P F P T S S++ Sbjct: 846 PKLPLYLHSIALTGIDLEPPPPAISKGLSLKSRDPNFIQPFTAPQKSRSLS 896 >SB_24975| Best HMM Match : ET (HMM E-Value=1) Length = 316 Score = 29.9 bits (64), Expect = 2.5 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -1 Query: 796 TADVTVEGVNVXP--PLHXFAXLLA-VSPLCIKPPSPAISXTSTRSSNPRFHTPTT 638 +A VT V+V P PL A + A VS P SP+ S T++ S P HTP T Sbjct: 114 SASVTAS-VSVTPNTPLSLSASVTASVSVTPNTPQSPSASVTASVSVTPNIHTPVT 168 >SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) Length = 592 Score = 29.5 bits (63), Expect = 3.4 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Frame = -3 Query: 356 YKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLK---DN 186 + + + DN L T L +K+ G +VFD FDT+ +R + DN Sbjct: 313 HSLTMIDNEL-TGDPLDIKMFEATG---WVFDEPGE-DNKKFDTIAPSTVRPKTREMTDN 367 Query: 185 KTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVK 72 + L I+ SS++ R V +R + SD VYVK Sbjct: 368 QVPLEVGIIRQFPFSSDVQRMTVITRILGSDHMDVYVK 405 >SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1308 Score = 29.5 bits (63), Expect = 3.4 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = -2 Query: 723 RPYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAP 544 +PY + PP+ S +Q +P + P P +P+ + PG+ P +S P Sbjct: 905 QPYNTPMPPISSTPYQAPPTLPPTTLTTPSWSQP---VPVPSMYQPQPPGIMQPPTSIPP 961 Query: 543 SAYLTPSS 520 S + P S Sbjct: 962 SQPMAPPS 969 >SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) Length = 305 Score = 29.5 bits (63), Expect = 3.4 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 1/84 (1%) Frame = -1 Query: 760 PPLHXFAXLLAVS-PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPPDAVLEGV 584 PP+ A + A + PL P P S P P P L + PP +VL Sbjct: 168 PPIAPAATVPAPAVPLAAASPPPP-SGGPPPPPPPPPPPPPPPILELAAPPPPGSVLGAA 226 Query: 583 RAGVKASVVIRGSISVSHPLVTGH 512 G+K+ VV G S+ + GH Sbjct: 227 LTGIKSGVVGGGGESLMDSFLLGH 250 >SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 158 Score = 29.1 bits (62), Expect = 4.4 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 703 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPP 605 P+PA + T T+ + P HTPTTP T+ + P Sbjct: 94 PTPATTPTPTKPT-PTAHTPTTPTPTAHTPTKP 125 >SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2870 Score = 28.7 bits (61), Expect = 5.9 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = -2 Query: 639 PQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 490 P T P P +PL P P PP+ + P+ TP++ +PP Sbjct: 903 PTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPP 952 >SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) Length = 2748 Score = 28.3 bits (60), Expect = 7.7 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 646 PTTPDLTSISINPPDAVLEGVRAGVKASVVIRGSI--SVSHPLVTG 515 PT+P++TS S P + ++AG + VV+ ++ SV P++ G Sbjct: 1911 PTSPEMTSRSGQPFKRFTKHIKAGDRLRVVMGSTVLKSVLQPVIQG 1956 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,953,796 Number of Sequences: 59808 Number of extensions: 517761 Number of successful extensions: 1634 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1627 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2239700683 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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