Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H16
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 31 1.3
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.2
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 3.0
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 29 5.2
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 28 6.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 9.0
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 9.0
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 720 PYASSHPPLRSRXHQPDHQIPDS 652
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Frame = -2
Query: 693 RSRXHQPDH--QIPDSIHQPPQT*HPFPSI---PL-TPY*KEFAPGLKPPL--SSEAPSA 538
+S H P+H +P S P P++ P+ TP A L PP+ SS P
Sbjct: 442 QSPAHTPEHVCPLPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPL 501
Query: 537 YLTPSSLGMXKGVSPPYFQVNDESQASRLISR 442
TP S PY Q+N+ +R +R
Sbjct: 502 PRTPQPNNGLPNASLPYNQINNAGSFTRTAAR 533
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 699 PLRSRXHQPDHQIPDSIHQP-PQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
P + QP P P PQ P P+ P PY + P PPL+S +A P+
Sbjct: 37 PYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 727 VSPLCIKPP-SPAISXTSTRSSNPRFHTPTTPDLTSISINPPD 602
VS C++PP +P + ++T ++ P+ T +T TS +I D
Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIATTD 1187
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 573 TPARTPSSTASGGLMEMDVKSGVVGVWNRGFDDR 674
T P + +GG+ E+D ++ VVGV+ + F ++
Sbjct: 276 TSVACPGDSGAGGVKEIDKRTTVVGVFTKKFREK 309
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 269 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHV-SSD 93
++D +C F+ + + YD I T + LS S AS+ S R L+ + V S
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294
Query: 92 SFGVYVKS*SLIL 54
+ G + S LIL
Sbjct: 295 AIGGFAFSDDLIL 307
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = -2
Query: 720 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPS 541
P + P P P + P +P PS P Y E A + PP E PS
Sbjct: 353 PSPAPQEPAHPSPSYPSPSYPSPSYPSPS--YPSPSYPSPSYPAEPAYSVPPPAKPEQPS 410
Query: 540 -AYLTPS 523
Y PS
Sbjct: 411 GGYDAPS 417
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPP 490
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPP 490
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,603,039
Number of Sequences: 27780
Number of extensions: 376226
Number of successful extensions: 1366
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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