BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H16 (808 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 31 1.3 Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 30 2.2 U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.2 U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 3.0 U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 29 5.2 Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 28 6.8 Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 6.8 AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 9.0 AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 9.0 >Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical protein T20D3.11 protein. Length = 1843 Score = 30.7 bits (66), Expect = 1.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 720 PYASSHPPLRSRXHQPDHQIPDS 652 P +S HPPL S H +H PD+ Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88 >Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical protein C34E11.2 protein. Length = 677 Score = 29.9 bits (64), Expect = 2.2 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 8/92 (8%) Frame = -2 Query: 693 RSRXHQPDH--QIPDSIHQPPQT*HPFPSI---PL-TPY*KEFAPGLKPPL--SSEAPSA 538 +S H P+H +P S P P++ P+ TP A L PP+ SS P Sbjct: 442 QSPAHTPEHVCPLPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPL 501 Query: 537 YLTPSSLGMXKGVSPPYFQVNDESQASRLISR 442 TP S PY Q+N+ +R +R Sbjct: 502 PRTPQPNNGLPNASLPYNQINNAGSFTRTAAR 533 >U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hedgehog-like family)protein 7 protein. Length = 401 Score = 29.9 bits (64), Expect = 2.2 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = -2 Query: 699 PLRSRXHQPDHQIPDSIHQP-PQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523 P + QP P P PQ P P+ P PY + P PPL+S +A P+ Sbjct: 37 PYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96 >U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein F40H6.5 protein. Length = 1288 Score = 29.5 bits (63), Expect = 3.0 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 727 VSPLCIKPP-SPAISXTSTRSSNPRFHTPTTPDLTSISINPPD 602 VS C++PP +P + ++T ++ P+ T +T TS +I D Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIATTD 1187 >U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like protease protein 6 protein. Length = 360 Score = 28.7 bits (61), Expect = 5.2 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +3 Query: 573 TPARTPSSTASGGLMEMDVKSGVVGVWNRGFDDR 674 T P + +GG+ E+D ++ VVGV+ + F ++ Sbjct: 276 TSVACPGDSGAGGVKEIDKRTTVVGVFTKKFREK 309 >Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical protein T20B3.15 protein. Length = 349 Score = 28.3 bits (60), Expect = 6.8 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -3 Query: 269 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHV-SSD 93 ++D +C F+ + + YD I T + LS S AS+ S R L+ + V S Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294 Query: 92 SFGVYVKS*SLIL 54 + G + S LIL Sbjct: 295 AIGGFAFSDDLIL 307 >Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical protein T10B10.1 protein. Length = 428 Score = 28.3 bits (60), Expect = 6.8 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 1/67 (1%) Frame = -2 Query: 720 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPS 541 P + P P P + P +P PS P Y E A + PP E PS Sbjct: 353 PSPAPQEPAHPSPSYPSPSYPSPSYPSPS--YPSPSYPSPSYPAEPAYSVPPPAKPEQPS 410 Query: 540 -AYLTPS 523 Y PS Sbjct: 411 GGYDAPS 417 >AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical protein Y57A10A.18b protein. Length = 1459 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPP 490 P+++EAP+A PS + +G SPP Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227 >AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical protein Y57A10A.18a protein. Length = 1456 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 564 PLSSEAPSAYLTPSSLGMXKGVSPP 490 P+++EAP+A PS + +G SPP Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,603,039 Number of Sequences: 27780 Number of extensions: 376226 Number of successful extensions: 1366 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1257 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1359 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1977346024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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