BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H14 (802 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 124 7e-29 Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 31 1.3 Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 31 1.3 Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 31 1.3 AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 31 1.3 AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.9 U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.8 AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.8 Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 28 8.9 U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.9 AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.9 AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.9 >Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical protein B0393.1 protein. Length = 276 Score = 124 bits (299), Expect = 7e-29 Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 5/146 (3%) Frame = -1 Query: 793 AVXAIENPXXVXVXSSRPXRSACCTEVCRAHRXYAYCGTFHTRCFY*XRSKLHSREXRLL 614 A+ A+ENP V V S+RP + A G F C K +E RLL Sbjct: 64 AIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTF-KEPRLL 122 Query: 613 IVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV 434 ++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+ Sbjct: 123 VISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREI 182 Query: 433 LRLRGVLPRDQRW-----DVVVDLFF 371 L LRG + R + +++ DL+F Sbjct: 183 LILRGKISRQTGFVLEGKEIMPDLYF 208 >Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical protein ZK1098.10d protein. Length = 1185 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -1 Query: 544 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 365 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 364 *XLKKVKRMNNKP 326 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical protein ZK1098.10b protein. Length = 1157 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -1 Query: 544 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 365 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 364 *XLKKVKRMNNKP 326 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical protein ZK1098.10a protein. Length = 1139 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -1 Query: 544 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 365 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 534 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 591 Query: 364 *XLKKVKRMNNKP 326 +KK K N++P Sbjct: 592 ASMKKTKTSNHRP 604 >AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. Length = 1157 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -1 Query: 544 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 365 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 364 *XLKKVKRMNNKP 326 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical protein F39C12.4 protein. Length = 103 Score = 29.5 bits (63), Expect = 2.9 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -2 Query: 216 CCTRCSSCFWSTPCSRRMVCP 154 CCT CF ST CS VCP Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72 >U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical protein C25F6.8 protein. Length = 188 Score = 28.3 bits (60), Expect = 6.8 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -1 Query: 538 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 431 CNTD+ R + CNT + +G+ + L+AR ++ Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81 >AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical protein Y45F3A.8 protein. Length = 404 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -3 Query: 566 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 459 +C+HS + K CGHC PM +HQ P + D Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380 >Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical protein F13E6.4 protein. Length = 442 Score = 27.9 bits (59), Expect = 8.9 Identities = 18/74 (24%), Positives = 28/74 (37%) Frame = +2 Query: 338 HPFHFLQGSRXEEQINHNIPALVTGKHTTKPQHFTCQQPPHQTNRVGRLGVAWDSNVHKS 517 H H + Q+N + V + PQ Q PH N + V D N H+ Sbjct: 361 HTLHQIPNQYQNSQMNDDSAMEVDYSMVSHPQQLQHQHQPHMHNNMPSNYVIDDINPHEF 420 Query: 518 *WGVCVAQSNHRNV 559 + ++ N+R V Sbjct: 421 DQYLQISNDNNRGV 434 >U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +2 Query: 167 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 262 L+EQ ++ +++L+R A R+LQP + PLA F Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624 >AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical protein Y40H7A.11 protein. Length = 124 Score = 27.9 bits (59), Expect = 8.9 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 487 TKSSHSIGLMWWLLA 443 T+ H IG+MWWL A Sbjct: 72 TRVEHKIGIMWWLCA 86 >AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +2 Query: 167 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 262 L+EQ ++ +++L+R A R+LQP + PLA F Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,131,283 Number of Sequences: 27780 Number of extensions: 318331 Number of successful extensions: 824 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 790 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 822 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1956310428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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