Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H12
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   8.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +2

Query: 50   PVEGGNGPGYVXXXXXXXXXXXEEKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHR 229
            P  GG+G G+             E+    S PP S  RL     A  T P+++  +K H+
Sbjct: 1420 PRPGGSGGGHTGPAGLISRWRDMEEGGRQSTPPASPARLARSSPASPT-PSKK--SKRHQ 1476

Query: 230  -APPLR 244
             A P+R
Sbjct: 1477 SASPIR 1482


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 134  PSPPPISHRRLRLEKGAR 187
            P+PPP      RLE G R
Sbjct: 1134 PAPPPTPREAARLEDGRR 1151


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 18/67 (26%), Positives = 25/67 (37%)
 Frame = +3

Query: 132 VLHLPQFLTGDYALKKAREALAPQNDYRLNPIEPHHSDSTKPTVPHSARRRLAVAGTHPV 311
           V  L +  T  Y ++ A  +L P     +     HH  S  P        R A+A TH  
Sbjct: 376 VPQLIRVTTQPYKVEGANVSLEPDTMLMIPIYAIHHDASIYPDPERFDPDRFALAATHAR 435

Query: 312 NRTALHP 332
           +  A  P
Sbjct: 436 HTHAFLP 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,658
Number of Sequences: 2352
Number of extensions: 19756
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)