Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H12
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.8
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 3.2
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 5.6
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 5.6
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 7.4
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 7.4
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 381 HRSHLAPPHHRTNSRVPGTPAPGTRQ 458
H SH A PHH+ ++ + + P Q
Sbjct: 433 HHSHAATPHHQHSTPLAHSSYPAAIQ 458
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.0 bits (47), Expect = 3.2
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 11/83 (13%)
Frame = +3
Query: 249 TKPTVPHSARRRLAVAGTHPVNRTALH-PRENPAGRRL----------GDTP*AVHRSHL 395
++P PH RR A P N ++ P+ P RL G+ V+ S
Sbjct: 106 SQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNR-PVYISQP 164
Query: 396 APPHHRTNSRVPGTPAPGTRQPL 464
PPH R PG +P+
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPV 187
Score = 22.6 bits (46), Expect = 4.3
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Frame = +3
Query: 252 KPTVPHSARRRLAVAGTHPVNRTALH-PRENPAGRRL----------GDTP*AVHRSHLA 398
+P PH RR A P N ++ P+ P RL G+ V+ S
Sbjct: 51 QPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNR-PVYISQPR 109
Query: 399 PPHHRTNSRVPGTPAPGTRQPL 464
PPH R PG +P+
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPV 131
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/54 (24%), Positives = 18/54 (33%)
Frame = +3
Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPAPGTRQPL 464
HP R P+ P R ++ PPH R PG +P+
Sbjct: 57 HPRLRREAEPKAEPGNNR------PIYIPQPRPPHPRLRREAESEAEPGNNRPV 104
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 340 FSRGWSAVLLTGWVPATASLRRALCGT 260
FS GW+ + GW CGT
Sbjct: 178 FSLGWTIAPMFGWNRYVPEGNMTACGT 204
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 142 SPNFSQETTP*KRR 183
SPN ++ETTP K R
Sbjct: 782 SPNSTKETTPKKER 795
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 340 FSRGWSAVLLTGWVPATASLRRALCGT 260
FS GW+ + GW CGT
Sbjct: 54 FSLGWTIAPMFGWNRYVPEGNMTACGT 80
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.8 bits (44), Expect = 7.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVP 431
+P+ HP P G H SHL P R NS+ P
Sbjct: 17 YPMVVHVYHPYRQPDGMNQCQAVNG-HCSHLCLPAPRINSKSP 58
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVP 431
+P+ HP P G H SHL P R NS+ P
Sbjct: 17 YPMVVHVYHPYRQPDGMNQCQAVNG-HCSHLCLPAPRINSKSP 58
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 9.8
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = +1
Query: 538 TPFRAPQPHGTP*PGRKTWSWPPQKFXSFXMRAMTARKERSFPSTAMRS 684
+P +P P P R+T PP+K + +M + S S
Sbjct: 444 SPVPSPDPLDLAIPVRETLILPPRKRCKMILESMEIERNGLIASQRQNS 492
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,314
Number of Sequences: 438
Number of extensions: 5316
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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