BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H12 (785 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.8 X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 3.2 X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.2 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.6 AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 5.6 AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 5.6 DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 7.4 DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 7.4 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.8 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 23.8 bits (49), Expect = 1.8 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +3 Query: 381 HRSHLAPPHHRTNSRVPGTPAPGTRQ 458 H SH A PHH+ ++ + + P Q Sbjct: 433 HHSHAATPHHQHSTPLAHSSYPAAIQ 458 >X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor protein. Length = 283 Score = 23.0 bits (47), Expect = 3.2 Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 11/83 (13%) Frame = +3 Query: 249 TKPTVPHSARRRLAVAGTHPVNRTALH-PRENPAGRRL----------GDTP*AVHRSHL 395 ++P PH RR A P N ++ P+ P RL G+ V+ S Sbjct: 106 SQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNR-PVYISQP 164 Query: 396 APPHHRTNSRVPGTPAPGTRQPL 464 PPH R PG +P+ Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPV 187 Score = 22.6 bits (46), Expect = 4.3 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 11/82 (13%) Frame = +3 Query: 252 KPTVPHSARRRLAVAGTHPVNRTALH-PRENPAGRRL----------GDTP*AVHRSHLA 398 +P PH RR A P N ++ P+ P RL G+ V+ S Sbjct: 51 QPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGNNR-PVYISQPR 109 Query: 399 PPHHRTNSRVPGTPAPGTRQPL 464 PPH R PG +P+ Sbjct: 110 PPHPRLRREAEPEAEPGNNRPV 131 >X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein. Length = 168 Score = 23.0 bits (47), Expect = 3.2 Identities = 13/54 (24%), Positives = 18/54 (33%) Frame = +3 Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPAPGTRQPL 464 HP R P+ P R ++ PPH R PG +P+ Sbjct: 57 HPRLRREAEPKAEPGNNR------PIYIPQPRPPHPRLRREAESEAEPGNNRPV 104 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 22.2 bits (45), Expect = 5.6 Identities = 9/27 (33%), Positives = 11/27 (40%) Frame = -2 Query: 340 FSRGWSAVLLTGWVPATASLRRALCGT 260 FS GW+ + GW CGT Sbjct: 178 FSLGWTIAPMFGWNRYVPEGNMTACGT 204 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 22.2 bits (45), Expect = 5.6 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 Query: 142 SPNFSQETTP*KRR 183 SPN ++ETTP K R Sbjct: 782 SPNSTKETTPKKER 795 >AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodopsin protein. Length = 154 Score = 22.2 bits (45), Expect = 5.6 Identities = 9/27 (33%), Positives = 11/27 (40%) Frame = -2 Query: 340 FSRGWSAVLLTGWVPATASLRRALCGT 260 FS GW+ + GW CGT Sbjct: 54 FSLGWTIAPMFGWNRYVPEGNMTACGT 80 >DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor protein. Length = 157 Score = 21.8 bits (44), Expect = 7.4 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVP 431 +P+ HP P G H SHL P R NS+ P Sbjct: 17 YPMVVHVYHPYRQPDGMNQCQAVNG-HCSHLCLPAPRINSKSP 58 >DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor protein. Length = 128 Score = 21.8 bits (44), Expect = 7.4 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 303 HPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVP 431 +P+ HP P G H SHL P R NS+ P Sbjct: 17 YPMVVHVYHPYRQPDGMNQCQAVNG-HCSHLCLPAPRINSKSP 58 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 21.4 bits (43), Expect = 9.8 Identities = 12/49 (24%), Positives = 19/49 (38%) Frame = +1 Query: 538 TPFRAPQPHGTP*PGRKTWSWPPQKFXSFXMRAMTARKERSFPSTAMRS 684 +P +P P P R+T PP+K + +M + S S Sbjct: 444 SPVPSPDPLDLAIPVRETLILPPRKRCKMILESMEIERNGLIASQRQNS 492 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 213,314 Number of Sequences: 438 Number of extensions: 5316 Number of successful extensions: 16 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24760908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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