Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H12
(785 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48657.2 68418.m06021 defense protein-related weak similarity... 31 0.66
At5g48657.1 68418.m06020 defense protein-related weak similarity... 31 0.66
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 31 0.66
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 31 0.87
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi... 31 1.1
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 2.6
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 2.6
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.5
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 3.5
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 29 4.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 24 5.2
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.1
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ... 28 6.1
At3g58870.1 68416.m06561 expressed protein predicted protein, Ar... 28 6.1
At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein... 28 6.1
At1g20720.1 68414.m02596 helicase-related similar to BRCA1-bindi... 28 6.1
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 8.1
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 28 8.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 8.1
>At5g48657.2 68418.m06021 defense protein-related weak similarity to
SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis
thaliana}
Length = 219
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 404 SPPDQQPSTGHPRTRHPTAPTGDERELRARAAHS 505
S PDQQP + R RH + DE E R AH+
Sbjct: 55 SRPDQQPPNHNVRPRHERFNSRDETEFRPSPAHN 88
>At5g48657.1 68418.m06020 defense protein-related weak similarity to
SP|Q8GYN5 RPM1-interacting protein 4 {Arabidopsis
thaliana}
Length = 245
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 404 SPPDQQPSTGHPRTRHPTAPTGDERELRARAAHS 505
S PDQQP + R RH + DE E R AH+
Sbjct: 23 SRPDQQPPNHNVRPRHERFNSRDETEFRPSPAHN 56
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = +2
Query: 395 CAASPPDQQPSTGHPRTRHPTAPTGDERELRARAAHSAFFAVKPKRDPLPFALLSLTERH 574
C PP + GH R P A TG R+ A A +R PLP + H
Sbjct: 8 CKRQPPPLATTAGHHRRSPPPATTGHHH----RSPPPAITACHHRRPPLP---ATTAGHH 60
Query: 575 DQVAKPGHGLPKNXGPLXC 631
Q+ P + N G C
Sbjct: 61 RQLRPPSIPVTTNTGHRHC 79
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +2
Query: 134 PSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGTAQCAPKARRRR 298
P PPP RR L LP P PPL + + C P R RR
Sbjct: 42 PPPPPPMRRRAPLPPPPPPAMRRRVLPRPPPPPPPLPMFDAEVLCCCYPPTRVRR 96
>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
protein low similarity to post-transcriptional control
of chloroplast gene expression CRP1 [Zea mays]
GI:3289002; contains Pfam profile PF01535: PPR repeat
Length = 855
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 378 VHRSHLAPPHHRTNSRVPGTPAPGTRQPLREMNG 479
+ R HLA + R+ RVP +PGT+Q ++ G
Sbjct: 181 IRREHLAKVYPRSADRVPINSSPGTKQASNDVAG 214
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/116 (21%), Positives = 35/116 (30%)
Frame = +2
Query: 134 PSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGTAQCAPKARRRRYPSC* 313
P PPP+ + S P P P +PP +H P P
Sbjct: 550 PPPPPV-YSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPP 608
Query: 314 *DGTPSPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRTRHPTAPTGDERE 481
P P +Q PP SPP + P P + P +++E
Sbjct: 609 VHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPPRPPKINSPPVQSPPPAPVEKKE 664
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 134 PSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHET 256
P PPPIS R + S A + P P PPL+ H +
Sbjct: 575 PPPPPISSLRSTPSPSSTSNSIATQGPPPPPPPPPLQSHRS 615
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 3.5
Identities = 51/204 (25%), Positives = 71/204 (34%), Gaps = 8/204 (3%)
Frame = +2
Query: 122 KSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGTAQCAPKARRRRY 301
+ R SP P RR R P+ + +PP R H + P AR+RR
Sbjct: 298 EGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSP-----TPPARQRR- 351
Query: 302 PSC**DGTPSPGKXXXXXXXXXXXXGAQEPPC----AASPPDQQPSTGHPRTRHPTAPTG 469
+PSP + PP + SPP ++ + P R +P+
Sbjct: 352 -------SPSPPARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSP 404
Query: 470 DERELRARA-AHSAFFAVKPKRDPLPFALLSLTERHDQVAKPG--HGLPKNXGPLXCGR* 640
R R+R+ + P R P P A L ++ P LP
Sbjct: 405 LYRRNRSRSPLAKRGRSDSPGRSPSPVARLR-DPTGARLPSPSIEQRLPSPPVAQRLPSP 463
Query: 641 QPARRGL-SPAPR*GLAASAPXRA 709
P R GL SP P L + P RA
Sbjct: 464 PPRRAGLPSPPPAQRLPSPPPRRA 487
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 386 EPPCAASPPDQQPSTGHPRTRHPTAPTGDERELR 487
+PP + PP + P PR RHP P E+ R
Sbjct: 95 QPPPRSQPPPKPPQKNLPR-RHPPPPRSPEKPKR 127
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 386 EPPCAASPPDQQPSTGHPRTRHPTAPTGDERE 481
+PP ++ PP P T H +H T T E
Sbjct: 46 QPPVSSQPPSPSPHTHHHHKKHLTTTTPPPHE 77
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +2
Query: 125 SRGPSPPPIS--HRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGTAQCAPKA 286
S+ PSP P H+ ++ + P + P K R+PP H P A
Sbjct: 395 SKSPSPVPTRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPPPA 450
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 389 PPCAASPPDQQPSTGHPRTRHPTAP 463
PP A+SPP P P H P
Sbjct: 447 PPPASSPPTSPPVHSTPSPVHKPQP 471
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 213 RLNPIEPHHSD--STKPTVPHSARRRLAVAGTHPVNRTALHPREN--PAGRRLGDTP*AV 380
R P P HS S PT P + ++ + PR + PA +P +
Sbjct: 131 RNQPSAPAHSPVPSVSPTQPPKSHSPVSPVAPASAPSKSQPPRSSVSPAQPPKSSSPIS- 189
Query: 381 HRSHLAPPHHRTNSRVPGTPAPGTRQP 461
H L+P H ++S P TP+P + P
Sbjct: 190 HTPALSPSHATSHS--PATPSPSPKSP 214
>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 980
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +3
Query: 228 EPHHSDSTKPTVPHSARRRLAVAGTHPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPH 407
EP++ D P R R + H ++ P + RR G +HR
Sbjct: 589 EPYYEDCI-PITDMDYRYRSENSSAHAIHNLKHSPENDLYCRRRGGYDYNLHRDRYEDGV 647
Query: 408 HRTNSRVP 431
HR SR+P
Sbjct: 648 HRVESRIP 655
>At3g58870.1 68416.m06561 expressed protein predicted protein,
Arabidopsis thaliana
Length = 163
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 330 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPAPGTRQ 458
PR N RR P +VHR +PP H+TN PG A T +
Sbjct: 54 PRRNANRRRR--VPVSVHRR--SPPTHQTNYNSPGKLATPTHR 92
>At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein
contains InterPro accession IPR001199: Cytochrome b5
Length = 121
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 618 VLXHAGDDSPQGEVFPQHRDEV 683
+L HAGDDS G PQH V
Sbjct: 87 ILDHAGDDSTDGFFGPQHATRV 108
>At1g20720.1 68414.m02596 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo
sapiens].;
Length = 1169
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 456 VGCRVRGCPVLGCWSGGEAAQ 394
VG VRGCP WS E AQ
Sbjct: 230 VGKNVRGCPYFASWSMAENAQ 250
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 380 AQEPPCAASPPDQQPSTGHPRTRHPTAP 463
A PP AA+PP Q P P+ + P P
Sbjct: 264 APPPPPAAAPPPQPPPPPPPKPQPPPPP 291
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 389 PPCAASPPDQQPSTGHPRTRHPTAPTG 469
PP A PP Q P G+P +P G
Sbjct: 512 PPPAGYPPPQYPQAGYPPAGYPPPQQG 538
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 389 PPCAASPPDQQPSTGHPRTRHPTAPT 466
PP + +PP QPS P T P +PT
Sbjct: 69 PPGSLTPPLPQPSPSAPITPSPPSPT 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,964
Number of Sequences: 28952
Number of extensions: 392644
Number of successful extensions: 1369
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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