Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H11
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69902-6|CAD89723.1|  684|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z69902-5|CAA93762.1|  725|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z69902-6|CAD89723.1|  684|Caenorhabditis elegans Hypothetical
           protein C47D12.6b protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 565 EQSNAWRILLRNDRKSRHRRIKKQRRYEHLAATSQLSPGGTFLAPLAKTLYTK 723
           +Q   W+ L     K  HR++ K+     L    QLSPG  F  P    +Y K
Sbjct: 264 KQLKEWQKLQEEAAKRDHRKLGKEH---DLFFFHQLSPGSAFWYPKGAHIYNK 313


>Z69902-5|CAA93762.1|  725|Caenorhabditis elegans Hypothetical
           protein C47D12.6a protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +1

Query: 565 EQSNAWRILLRNDRKSRHRRIKKQRRYEHLAATSQLSPGGTFLAPLAKTLYTK 723
           +Q   W+ L     K  HR++ K+     L    QLSPG  F  P    +Y K
Sbjct: 305 KQLKEWQKLQEEAAKRDHRKLGKEH---DLFFFHQLSPGSAFWYPKGAHIYNK 354


>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
           protein F21C10.7 protein.
          Length = 2541

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 568 QSNAWRILLRNDRKSRHRRIKKQRRYEHLAATSQLSPGGTFLAPLAKTLYTKGSIGR 738
           QSN      +  RK    +++  ++ EHL A   LS   TF   L KT+  +  I R
Sbjct: 718 QSNNQEQFEQVRRKIEDLKVEVDKKSEHLEACKTLSHNETFQTQLHKTIENQEQIRR 774


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 448 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 269
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 268 SH--SKRETRRRSP 233
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,626,480
Number of Sequences: 27780
Number of extensions: 372806
Number of successful extensions: 1143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)