Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H10
(807 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 73 1e-11
UniRef50_Q0D9Q0 Cluster: Os06g0704500 protein; n=6; Oryza sativa... 35 2.1
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 4.8
UniRef50_Q5CPV4 Cluster: Large low complexity protein; n=4; Cryp... 34 4.8
UniRef50_Q5KB18 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome s... 33 8.5
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 33 8.5
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo... 33 8.5
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/48 (66%), Positives = 34/48 (70%)
Frame = -3
Query: 766 PXSFXIILAVSPLCIKPPFPCDXGYINPIIKSPIPYTNHPRLNIHFHQ 623
P S I + L + PCD GYINPIIKSPIPYTNHPRLNIHFHQ
Sbjct: 156 PSSARITMGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQ 203
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = -1
Query: 615 DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 520
DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG
Sbjct: 206 DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 237
>UniRef50_Q0D9Q0 Cluster: Os06g0704500 protein; n=6; Oryza
sativa|Rep: Os06g0704500 protein - Oryza sativa subsp.
japonica (Rice)
Length = 409
Score = 35.1 bits (77), Expect = 2.1
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 680 HQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS-SLGMXKGVSP 504
H+ P H PP+ P P P +P P PP SE+P + + PS S G SP
Sbjct: 252 HRSPLPHHMPPRRTPPTPPPPSSPTPSHLPP--PPPTYSESPKSSMPPSTSPPSSHGASP 309
Query: 503 P 501
P
Sbjct: 310 P 310
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 271 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 158
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_Q5CPV4 Cluster: Large low complexity protein; n=4;
Cryptosporidium|Rep: Large low complexity protein -
Cryptosporidium parvum Iowa II
Length = 1667
Score = 33.9 bits (74), Expect = 4.8
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = -2
Query: 689 QPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXK 516
QP QIP +PP P P IP PY K P PP + P Y P S K
Sbjct: 1477 QPKPQIPPPYQKPPSYPQPKPQIP-PPYQK---PPSYPPSKPQIPPPYQKPPSYPQPK 1530
>UniRef50_Q5KB18 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 541
Score = 33.5 bits (73), Expect = 6.4
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -2
Query: 692 HQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 513
+ P Q P + PP + P+PS P T AP P SS SAY TP +
Sbjct: 409 YYPPPQPPTARPPPPLSAQPYPSYPQTAM-PANAPMYPPRRSSSPNSAYRTPQTASYP-- 465
Query: 512 VSPPYFQV 489
+SP +Q+
Sbjct: 466 ISPTEYQM 473
>UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14367, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1031
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -2
Query: 686 PDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 507
PD P ++ +PP P P P +F+P + PPL + PS + G
Sbjct: 407 PDSPTPTTLERPP------PDEPAPPLPPDFSPSISPPLCLHDDAIDEEPSGALLGSGSH 460
Query: 506 PPY 498
PP+
Sbjct: 461 PPW 463
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 33.1 bits (72), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 709 PCDXGYINPIIKSPIPYTNHPRLNIHFHQ 623
P D NP++K + Y N P+L + FH+
Sbjct: 170 PADLRSTNPVVKDTVSYNNTPKLTVAFHK 198
>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
elongatus|Rep: Tll0286 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 158
Score = 33.1 bits (72), Expect = 8.5
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -3
Query: 472 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 293
L LL+VIP L P +H +I + A NQ ++ + + DN T + + +
Sbjct: 8 LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67
Query: 292 TRVYVFDPSCYFSTP 248
R+ F +F P
Sbjct: 68 LRLVGFPEQYHFRHP 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,540,405
Number of Sequences: 1657284
Number of extensions: 14832482
Number of successful extensions: 44720
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44614
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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