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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H10
         (807 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    30   0.34 
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ...    28   1.4  
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc...    27   2.4  
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc...    27   3.1  
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T...    27   3.1  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    27   4.1  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    26   5.5  
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac...    26   5.5  
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha...    26   7.2  
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha...    26   7.2  
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy...    25   9.6  
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p...    25   9.6  
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    25   9.6  

>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -2

Query: 743  GGLALMHQ-ATLPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL- 570
            GG+A  H  +T P+R +   P      +   PP +  P PS P  P     AP   PPL 
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--PPPLP 1736

Query: 569  SSEAPS 552
            +S APS
Sbjct: 1737 ASSAPS 1742


>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 570

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 110 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 238
           R +A  Y+  + LGG++ S+    EK  F  + N  DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154


>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 587

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
 Frame = -2

Query: 674 IPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLT--PSSLGMXKGVSPP 501
           +P  +  PP    PFP  P  P          PP    AP +Y T   S+L    GVS P
Sbjct: 525 VPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP---GAPGSYNTSESSNLNAPPGVSMP 581


>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 745

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 265 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 170
           CY   P + + L ++I+T+L DN   ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199


>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 988

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = -3

Query: 364 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 185
           K K+ D   V  K   +  +S   T+ +V +   YF   PF+ V+       +K + T  
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664

Query: 184 LSASIQASLPSSEIYRQL 131
           +      +  SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +2

Query: 482 HHSLENKGAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKS 646
           H S  NK A    P P      ++  P     A TP+   SS A  GL E++ KS
Sbjct: 511 HTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSLQSSNAPVGLGEVESKS 565


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = -2

Query: 686 PDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 528
           P    P S  +PP +  P PSIP  P     +P   PP+ S+AP     PSSL
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIP-PP-----SPASAPPIPSKAPP---IPSSL 171


>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
           Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 155

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 475 KLRALLVVIPRILRSPPPTHPLIEDV 398
           KLR++L  I ++LR P P  PL+  +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130


>SPAC458.03 |||nuclear telomere cap complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 868

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 152 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 54
           L++L  +G  SPC  RL   L  +++P    FW
Sbjct: 21  LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50


>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 363

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 503 GAKPLXPCPVTRG*DTLMEPLMTTEALTPARTPSSTASGGLMEMDVKSGV 652
           G + +  CP T+G    +EP++       A+TP+S    G+   +   GV
Sbjct: 81  GGRVVHDCPTTKGIGYFLEPILILCLF--AKTPTSLTLTGVTSSNEDIGV 128


>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 308

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 340 LVTHKELALKVSSIIGTRVYVFDPSCY 260
           +V H E  LKV  II T  Y  D S Y
Sbjct: 37  VVKHHEEFLKVCDIISTFTYQLDASIY 63


>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 480 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 394
           + SF PY S F A   P L ++PS+  +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 125 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 226
           ++Q A+ LG   RS  RC  KSSF+    + DVV
Sbjct: 33  LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,912,600
Number of Sequences: 5004
Number of extensions: 57806
Number of successful extensions: 177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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