Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_H10
(807 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.073
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 32 0.39
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 1.2
At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /... 30 2.1
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 30 2.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.7
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 29 2.7
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 2.7
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 29 3.6
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 3.6
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 3.6
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 4.8
At4g20200.1 68417.m02953 terpene synthase/cyclase family protein... 29 4.8
At5g63610.1 68418.m07986 protein kinase, putative similar to cyc... 28 6.3
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 28 6.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 8.4
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 28 8.4
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 28 8.4
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 481 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIDYK-VKIADNNLVTHKELALKV 308
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 307 SSIIGTRVYVFDPSC 263
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 692 HQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 513
+ P HQ+P S H P H + + P+ G PP S P ++ P S+GM G
Sbjct: 589 NMPHHQLPPSSHMPLHPHHLPRPMQMPPH------GHMPPPS--MPMSHQMPGSMGMQGG 640
Query: 512 VSPPYFQ 492
++P Q
Sbjct: 641 MNPQMSQ 647
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -2
Query: 686 PDHQIPDSIHQPPQT*H-PFPSIPL-TPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 513
P + P +H PP H P P P+ +P +P PP+ S P + P S
Sbjct: 578 PVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVV 637
Query: 512 VSPP 501
SPP
Sbjct: 638 YSPP 641
>At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 354
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 716 TLPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL 570
++P+ H D Q P S++ P P+ P TP+ + AP +PPL
Sbjct: 290 SIPITCSFHTEDSQ-PASLNPQPSA--PYAISPTTPHTQPHAPTTQPPL 335
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 599 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 498
++AP KP + S P Y TPS K PPY
Sbjct: 44 KYAPHPKPYVKSSPPPQYYTPSPKVNYKSPPPPY 77
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -2
Query: 716 TLPLRXRXHQPDHQIPDSIHQPPQT*H--PFPSIPLTPY*KEFAP--GLKPPLSSEAPSA 549
T P P P S P T P PS PL P +P L PPL +PSA
Sbjct: 25 TTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSA 84
Query: 548 YLTPS 534
+TPS
Sbjct: 85 PITPS 89
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 454 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKEL 320
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 710 PLRXRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTP 537
P++ R P ++ D+ PPQ P PS P +P ++P PP+ S P Y +P
Sbjct: 516 PVKNRRSPPPPKVEDTRVPPPQPPMPSPS-PPSPI---YSP--PPPVHSPPPPVYSSP 567
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 599 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 498
++AP KP + S P Y TPS K PPY
Sbjct: 50 KYAPHPKPYVYSSPPPPYYTPSPKVNYKSPPPPY 83
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 301 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 125
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = -2
Query: 686 PDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 507
P + P +PP P P IP P + P KPP P Y+ P K
Sbjct: 52 PTVKPPTHTPKPPTVKPPPPYIPCPP--PPYTP--KPPTVKPPPPPYVKPPPPPTVKPPP 107
Query: 506 PPY 498
PPY
Sbjct: 108 PPY 110
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 283 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLV 128
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRI 61
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = -2
Query: 692 HQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 513
H+ + + P + P P + ++ P KP L + P Y +PS K
Sbjct: 38 HKHESSYSPKKYSPYYSASPLPPLQYRRQGPKYTPHPKPYLFNSPPPPYYSPSPKEDYKS 97
Query: 512 VSPPY 498
PPY
Sbjct: 98 PPPPY 102
>At4g20200.1 68417.m02953 terpene synthase/cyclase family protein
5-epi-aristolochene synthase, Nicotiana tabacum,
PATX:G505588
Length = 604
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 146 LGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRS*KVARGIEDVDSGAY 298
L G S+ + K +F LK+RP +V I+GR G ED S Y
Sbjct: 464 LAGIFMSMGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGY 514
>At5g63610.1 68418.m07986 protein kinase, putative similar to
cyclin-dependent kinase cdc2MsE [Medicago sativa]
gi|1806144|emb|CAA65981; contains protein kinase domain,
Pfam:PF00069
Length = 470
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 630 SINPPDAVLEGVRAGVKASVVIRGSISVSHPLV 532
SINPP AV G AG A GS S+ P+V
Sbjct: 372 SINPPQAVAAGNVAGNMAGAHGMGSRSMPRPMV 404
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 671 PDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 513
P+ HQP H P PY ++ PG +P S A SA ++P S G
Sbjct: 410 PNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTAVSA-ISPDSAPAGSG 461
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/64 (25%), Positives = 23/64 (35%)
Frame = -2
Query: 728 MHQATLPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSA 549
+H P+ P H P +H PP H P +P +P P+ S P
Sbjct: 756 VHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPPPV 815
Query: 548 YLTP 537
+ P
Sbjct: 816 FSPP 819
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 559 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 395
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 394 MATNQAIIDY 365
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 559 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 395
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 394 MATNQAIIDY 365
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,747,409
Number of Sequences: 28952
Number of extensions: 336593
Number of successful extensions: 1172
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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