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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H04
         (808 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa...    29   1.0  
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ...    28   1.4  
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    28   1.4  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    28   1.4  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    28   1.8  
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc...    27   3.1  
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T...    27   3.1  
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy...    26   5.5  
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo...    26   5.5  
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac...    26   5.5  
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc...    26   5.5  
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha...    26   7.2  
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy...    25   9.6  
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p...    25   9.6  
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ...    25   9.6  
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    25   9.6  

>SPBC1289.12 |usp109||U1 snRNP-associated protein
           Usp109|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 352

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = -1

Query: 712 KPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSEAPSAYLT 533
           +PPS A+  +   +  P    P  P +     NP TP+     P      +  A +  L 
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303

Query: 532 PSSLGMXKGVSPPYFQV 482
           P   G+  G   PY  V
Sbjct: 304 P---GLKNGSDYPYLSV 317


>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 570

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 103 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 231
           R +A  Y+  + LGG++ S+    EK  F  + N  DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = -1

Query: 706 PSPAISXTSTRSSN---PRFHTPTTPD-LTSXSINPLTPY*KEFAPGLKP 569
           P P+IS T+T SS       H PTTPD      +  L P     +P  KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -1

Query: 736 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXS 620
           LA S       S  IS +ST   N  FH PT    TS S
Sbjct: 790 LATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSS 828


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -1

Query: 709 PPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSEAP 548
           PP PA + ++  SS+P   T +T   TS SI P         P + PP SS  P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421


>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 745

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 258 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 163
           CY   P + + L ++I+T+L DN   ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199


>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 988

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = -2

Query: 357 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 178
           K K+ D   V  K   +  +S   T+ +V +   YF   PF+ V+       +K + T  
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664

Query: 177 LSASIQASLPSSEIYRQL 124
           +      +  SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682


>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 384

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -1

Query: 715 IKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPG--LKPPLSSEAPSA 542
           I+  S   + TS  S++   ++ +TP+  S  +  LTP  +       L+ PL   +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353


>SPBC32C12.02 |ste11|aff1, stex|transcription factor
           Ste11|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 468

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 703 SPAISXTSTRSS-NPRFHTPTTPDLTSXSINPLTP-----Y*KEFAPGLKPPLSSEAPSA 542
           SP +S     S  +P    P+TP   + SI+P TP     Y  + A  L  PLS  + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343

Query: 541 YL 536
           YL
Sbjct: 344 YL 345


>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
           Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 155

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 468 KLRALLVVIPRILRSPPPTHPLIEDV 391
           KLR++L  I ++LR P P  PL+  +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130


>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 587

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
 Frame = -1

Query: 733 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSE 554
           A SP    PP  A + TS  SS     +P      + S  P  P     AP  +P     
Sbjct: 398 AASPQAGHPPPWAAASTSVSSSTS---SPAPWAKPASSAAPSNP-----APWQQPAAPQS 449

Query: 553 APSAYLTPSSLGMXKGVSPPYFQVNDES--QASRLI 452
           AP+  + PSSL       PP+ Q   +S  Q S L+
Sbjct: 450 APALSMNPSSL-------PPWQQPTQQSAVQPSNLV 478


>SPAC458.03 |||nuclear telomere cap complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 868

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 145 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 47
           L++L  +G  SPC  RL   L  +++P    FW
Sbjct: 21  LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50


>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 308

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 333 LVTHKELALKVSSIIGTRVYVFDPSCY 253
           +V H E  LKV  II T  Y  D S Y
Sbjct: 37  VVKHHEEFLKVCDIISTFTYQLDASIY 63


>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 473 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 387
           + SF PY S F A   P L ++PS+  +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330


>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 408

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 722 LMHQATLPCDLGYINPIIKSPIPYTNHP 639
           + HQA L C  GY + +    +P+ N P
Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 118 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 219
           ++Q A+ LG   RS  RC  KSSF+    + DVV
Sbjct: 33  LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,957,128
Number of Sequences: 5004
Number of extensions: 59263
Number of successful extensions: 254
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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