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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_H04
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287...    35   0.066
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322...    34   0.12 
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550     33   0.35 
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769...    31   1.4  
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333...    31   1.4  
02_02_0691 + 12999452-12999820                                         30   1.9  
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    30   2.5  
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053...    29   3.3  
12_01_0302 - 2286171-2286341,2286747-2286968                           29   4.4  
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225...    29   4.4  
11_06_0610 - 25449085-25453284                                         29   4.4  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   5.8  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    29   5.8  
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    28   7.6  
04_04_1125 + 31085106-31085714                                         28   7.6  

>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
            2879715-2879973,2880060-2880346,2880423-2880758,
            2880862-2881003,2881077-2881297,2881379-2881540,
            2881617-2881775,2881860-2882159,2882834-2883097,
            2883133-2883243,2883902-2883988
          Length = 1871

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = -1

Query: 709  PPSPAISXTS-TRSSNPRFHTPTTPDL--TSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539
            P SP+ S TS + S     ++PT+P    TS   +P +P     +P   P      PS  
Sbjct: 1761 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHA 1820

Query: 538  LTPSSLGMXKGVSPPY 491
             +PSS       SP Y
Sbjct: 1821 YSPSSPNYYSSTSPTY 1836


>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
            3220080-3223195,3223303-3223561,3223665-3223951,
            3224029-3224364,3224463-3224604,3224690-3224910,
            3224990-3225151,3225242-3225400,3225488-3225787,
            3226306-3226569,3227370-3227453
          Length = 1855

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = -1

Query: 709  PPSPAISXTS-TRSSNPRFHTPTTPDL--TSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539
            P SP+ S TS + S     ++PT+P    TS S +P +P     +P   P  +  +PS  
Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758

Query: 538  LTPSS--LGMXKGVSPPY 491
             +PSS  L      SP Y
Sbjct: 1759 YSPSSPRLSPYSQTSPNY 1776


>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
          Length = 204

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -1

Query: 763 PPLXXFAXILAVSPLCIKPPSPAISXTSTR-SSNPR--FHTPTTPDLTSXSINPLTP 602
           PP+   A  L V    I PPSPA +  S+R S +PR  F TP T   T+ S +P +P
Sbjct: 12  PPMIGRAGNLTVF---ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65


>12_01_0831 -
           7688342-7688772,7690678-7692610,7693142-7693915,
           7694019-7694142,7696084-7696189,7696346-7696532
          Length = 1184

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = -1

Query: 733 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSE 554
           + SP+ + P   ++S T   S+  R   P      + S  P TP     A  L PP  S 
Sbjct: 150 SASPIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTP---PSAKTLTPPRRSP 206

Query: 553 APSAYLTP 530
           +P++ LTP
Sbjct: 207 SPASTLTP 214


>01_01_0448 -
           3332238-3332330,3332414-3332481,3332570-3332618,
           3332716-3332798,3332900-3333023,3333389-3333486,
           3333555-3333634,3333712-3333782,3333872-3333953,
           3334158-3334237,3334365-3334416,3334843-3334958
          Length = 331

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 697 AISXTSTRSSNPRFHTPTTP 638
           A S T+TR S PR H PTTP
Sbjct: 2   AASSTATRLSPPRLHAPTTP 21


>02_02_0691 + 12999452-12999820
          Length = 122

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 27/85 (31%), Positives = 31/85 (36%)
 Frame = +3

Query: 495 GGETPLXMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEXDVKSGVVGVWNRGFDD 674
           G E P+  P   G R A G+    G   P A     G RG  E   +S        G   
Sbjct: 11  GSEAPVVAPKPRGWRMAVGSIGGGGISPPVARG---GRRGERERGRRSA-----GGGLTG 62

Query: 675 RVDVXEIAGEGGLMHKGETANIXAK 749
            VD    AGE G  H G  A   A+
Sbjct: 63  AVDAFRPAGEAGRQHAGAAAAAEAE 87


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = -1

Query: 709 PPSPAISXTSTRSSNPRFHTPT---TPDLTSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539
           PPSP+I  + T       +TPT   TP   S   +P TP     +    P  +  +PS+ 
Sbjct: 105 PPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPG-GGCSSSPTPCDAPPSPSSD 163

Query: 538 LTPSSLGMXKGVSP 497
            +P++ G   G SP
Sbjct: 164 TSPTTPGGGGGYSP 177


>04_03_0709 +
           18902507-18902704,18902795-18905028,18905114-18905365,
           18905446-18905556,18905646-18905727,18906002-18906193
          Length = 1022

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 25/96 (26%), Positives = 38/96 (39%)
 Frame = -1

Query: 733 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSE 554
           A++   + PPSP          +PR H P+ P L S    P  P     +P  +PPL + 
Sbjct: 562 AMTAAALAPPSPP------EPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTP 610

Query: 553 APSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISR 446
            P      S        +PP  Q +  +  S L+ +
Sbjct: 611 QPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQ 646


>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 84  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 185
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>12_01_0298 -
           2250517-2251235,2251331-2251577,2251615-2252951,
           2256029-2256188
          Length = 820

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 727 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPD 635
           SP  + P +PA S +S  SS+P   TP + D
Sbjct: 326 SPQSVVPSNPAASSSSVASSSPALATPESRD 356


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 709 PPSPAISXTSTRSSNPRFHTPTTPDLTSXS-INPLTPY*KEFAPGLKPPLSSE 554
           PP+P    +S     P  HTP+ P+ T  S  +P TP  K  +P   PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 76  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 222
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -2

Query: 243  PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 64
            P F T+LY     ++KD      S+     L S+  Y  L+DP   S D+    + +   
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407

Query: 63   ILHSF 49
            +LHSF
Sbjct: 1408 LLHSF 1412


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/79 (30%), Positives = 28/79 (35%)
 Frame = -1

Query: 763 PPLXXFAXILAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFA 584
           PPL      LA SP    PP P  +  S      +      P  T+ +  P  P      
Sbjct: 64  PPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAP-----V 118

Query: 583 PGLKPPLSSEAPSAYLTPS 527
           P   PP    APS Y  PS
Sbjct: 119 PAAAPP--PTAPSPYSAPS 135


>04_04_1125 + 31085106-31085714
          Length = 202

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
 Frame = -1

Query: 724 PLCIKPP---SPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPG--LKPPLS 560
           P C  PP   +PA   T      P   TPT P  T  +  P TP      P     PP  
Sbjct: 42  PPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTP 101

Query: 559 SEAPS 545
           + APS
Sbjct: 102 APAPS 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,759,440
Number of Sequences: 37544
Number of extensions: 449451
Number of successful extensions: 1507
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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