BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H04 (808 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 35 0.066 08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 34 0.12 02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 33 0.35 12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 31 1.4 01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 1.4 02_02_0691 + 12999452-12999820 30 1.9 01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 30 2.5 04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 3.3 12_01_0302 - 2286171-2286341,2286747-2286968 29 4.4 12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 29 4.4 11_06_0610 - 25449085-25453284 29 4.4 09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.8 02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.8 05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 7.6 04_04_1125 + 31085106-31085714 28 7.6 >05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613, 2879715-2879973,2880060-2880346,2880423-2880758, 2880862-2881003,2881077-2881297,2881379-2881540, 2881617-2881775,2881860-2882159,2882834-2883097, 2883133-2883243,2883902-2883988 Length = 1871 Score = 35.1 bits (77), Expect = 0.066 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = -1 Query: 709 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539 P SP+ S TS + S ++PT+P TS +P +P +P P PS Sbjct: 1761 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHA 1820 Query: 538 LTPSSLGMXKGVSPPY 491 +PSS SP Y Sbjct: 1821 YSPSSPNYYSSTSPTY 1836 >08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969, 3220080-3223195,3223303-3223561,3223665-3223951, 3224029-3224364,3224463-3224604,3224690-3224910, 3224990-3225151,3225242-3225400,3225488-3225787, 3226306-3226569,3227370-3227453 Length = 1855 Score = 34.3 bits (75), Expect = 0.12 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Frame = -1 Query: 709 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539 P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758 Query: 538 LTPSS--LGMXKGVSPPY 491 +PSS L SP Y Sbjct: 1759 YSPSSPRLSPYSQTSPNY 1776 >02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 Length = 204 Score = 32.7 bits (71), Expect = 0.35 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = -1 Query: 763 PPLXXFAXILAVSPLCIKPPSPAISXTSTR-SSNPR--FHTPTTPDLTSXSINPLTP 602 PP+ A L V I PPSPA + S+R S +PR F TP T T+ S +P +P Sbjct: 12 PPMIGRAGNLTVF---ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65 >12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915, 7694019-7694142,7696084-7696189,7696346-7696532 Length = 1184 Score = 30.7 bits (66), Expect = 1.4 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = -1 Query: 733 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSE 554 + SP+ + P ++S T S+ R P + S P TP A L PP S Sbjct: 150 SASPIRLSPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTP---PSAKTLTPPRRSP 206 Query: 553 APSAYLTP 530 +P++ LTP Sbjct: 207 SPASTLTP 214 >01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618, 3332716-3332798,3332900-3333023,3333389-3333486, 3333555-3333634,3333712-3333782,3333872-3333953, 3334158-3334237,3334365-3334416,3334843-3334958 Length = 331 Score = 30.7 bits (66), Expect = 1.4 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -1 Query: 697 AISXTSTRSSNPRFHTPTTP 638 A S T+TR S PR H PTTP Sbjct: 2 AASSTATRLSPPRLHAPTTP 21 >02_02_0691 + 12999452-12999820 Length = 122 Score = 30.3 bits (65), Expect = 1.9 Identities = 27/85 (31%), Positives = 31/85 (36%) Frame = +3 Query: 495 GGETPLXMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEXDVKSGVVGVWNRGFDD 674 G E P+ P G R A G+ G P A G RG E +S G Sbjct: 11 GSEAPVVAPKPRGWRMAVGSIGGGGISPPVARG---GRRGERERGRRSA-----GGGLTG 62 Query: 675 RVDVXEIAGEGGLMHKGETANIXAK 749 VD AGE G H G A A+ Sbjct: 63 AVDAFRPAGEAGRQHAGAAAAAEAE 87 >01_06_0565 + 30287253-30287502,30287522-30289010,30289133-30289277, 30289679-30289729 Length = 644 Score = 29.9 bits (64), Expect = 2.5 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = -1 Query: 709 PPSPAISXTSTRSSNPRFHTPT---TPDLTSXSINPLTPY*KEFAPGLKPPLSSEAPSAY 539 PPSP+I + T +TPT TP S +P TP + P + +PS+ Sbjct: 105 PPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPG-GGCSSSPTPCDAPPSPSSD 163 Query: 538 LTPSSLGMXKGVSP 497 +P++ G G SP Sbjct: 164 TSPTTPGGGGGYSP 177 >04_03_0709 + 18902507-18902704,18902795-18905028,18905114-18905365, 18905446-18905556,18905646-18905727,18906002-18906193 Length = 1022 Score = 29.5 bits (63), Expect = 3.3 Identities = 25/96 (26%), Positives = 38/96 (39%) Frame = -1 Query: 733 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPGLKPPLSSE 554 A++ + PPSP +PR H P+ P L S P P +P +PPL + Sbjct: 562 AMTAAALAPPSPP------EPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTP 610 Query: 553 APSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISR 446 P S +PP Q + + S L+ + Sbjct: 611 QPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALVEQ 646 >12_01_0302 - 2286171-2286341,2286747-2286968 Length = 130 Score = 29.1 bits (62), Expect = 4.4 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 84 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 185 RL+R RK + D+ G + +GEKLE + +E+ Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90 >12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951, 2256029-2256188 Length = 820 Score = 29.1 bits (62), Expect = 4.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 727 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPD 635 SP + P +PA S +S SS+P TP + D Sbjct: 326 SPQSVVPSNPAASSSSVASSSPALATPESRD 356 >11_06_0610 - 25449085-25453284 Length = 1399 Score = 29.1 bits (62), Expect = 4.4 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 709 PPSPAISXTSTRSSNPRFHTPTTPDLTSXS-INPLTPY*KEFAPGLKPPLSSE 554 PP+P +S P HTP+ P+ T S +P TP K +P PP + E Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667 >09_04_0737 - 19822822-19822973,19823069-19823135,19823666-19823822, 19824003-19824177,19824364-19824481,19824676-19824874, 19824983-19825062,19825141-19825257,19825791-19825961, 19826121-19826597 Length = 570 Score = 28.7 bits (61), Expect = 5.8 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 76 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 222 F+VD G G + ++++LAV+ G R CR VV DVVV Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140 >02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868, 30560292-30560346,30560537-30560613,30561228-30561315, 30561490-30561593,30562050-30562231,30562347-30563109, 30563195-30563438,30564513-30564658,30565158-30565283, 30565404-30565517,30565595-30565762,30566283-30566528, 30566605-30566767,30566970-30567064,30567274-30567357, 30567769-30568055,30568359-30568572,30568923-30569140, 30569386-30569623,30570312-30571118,30571202-30571301, 30571694-30571737,30571824-30571973 Length = 1942 Score = 28.7 bits (61), Expect = 5.8 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -2 Query: 243 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 64 P F T+LY ++KD S+ L S+ Y L+DP S D+ + + Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407 Query: 63 ILHSF 49 +LHSF Sbjct: 1408 LLHSF 1412 >05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385, 36507-36577,36850-37263,37518-38268 Length = 601 Score = 28.3 bits (60), Expect = 7.6 Identities = 24/79 (30%), Positives = 28/79 (35%) Frame = -1 Query: 763 PPLXXFAXILAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFA 584 PPL LA SP PP P + S + P T+ + P P Sbjct: 64 PPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAP-----V 118 Query: 583 PGLKPPLSSEAPSAYLTPS 527 P PP APS Y PS Sbjct: 119 PAAAPP--PTAPSPYSAPS 135 >04_04_1125 + 31085106-31085714 Length = 202 Score = 28.3 bits (60), Expect = 7.6 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Frame = -1 Query: 724 PLCIKPP---SPAISXTSTRSSNPRFHTPTTPDLTSXSINPLTPY*KEFAPG--LKPPLS 560 P C PP +PA T P TPT P T + P TP P PP Sbjct: 42 PPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTP 101 Query: 559 SEAPS 545 + APS Sbjct: 102 APAPS 106 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,759,440 Number of Sequences: 37544 Number of extensions: 449451 Number of successful extensions: 1507 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1496 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2197677108 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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