BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_H02 (790 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 143 1e-34 11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 143 1e-34 08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.4 08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.4 >12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738, 3429821-3430230,3430323-3430556,3430934-3431378, 3432300-3432390,3433292-3433518,3433786-3433861, 3434009-3434134,3434221-3434384 Length = 757 Score = 143 bits (347), Expect = 1e-34 Identities = 66/99 (66%), Positives = 78/99 (78%) Frame = -2 Query: 576 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 397 PRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+ Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295 Query: 396 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280 + A TE+D +EK ITPMGGFPHYG V D++M +G G Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334 Score = 86.2 bits (204), Expect = 3e-17 Identities = 38/52 (73%), Positives = 44/52 (84%) Frame = -3 Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 141 KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380 Score = 49.6 bits (113), Expect = 3e-06 Identities = 24/54 (44%), Positives = 30/54 (55%) Frame = -1 Query: 736 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLP 575 GTI DKV + + EK IPVD+VF +DEMID I +RW +LP Sbjct: 189 GTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242 >11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283, 3276406-3276815,3276942-3277200 Length = 389 Score = 143 bits (347), Expect = 1e-34 Identities = 66/99 (66%), Positives = 78/99 (78%) Frame = -2 Query: 576 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 397 PRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+ Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295 Query: 396 NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280 + A TE+D +EK ITPMGGFPHYG V D++M +G G Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334 Score = 93.5 bits (222), Expect = 2e-19 Identities = 42/60 (70%), Positives = 48/60 (80%) Frame = -3 Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117 KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388 Score = 49.6 bits (113), Expect = 3e-06 Identities = 24/54 (44%), Positives = 30/54 (55%) Frame = -1 Query: 736 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLP 575 GTI DKV + + EK IPVD+VF +DEMID I +RW +LP Sbjct: 189 GTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242 >08_02_0918 - 22617388-22617693,22617799-22617848,22618538-22618817, 22619654-22620340,22622870-22622944,22623150-22623285, 22624801-22625093,22625776-22626597 Length = 882 Score = 28.3 bits (60), Expect = 7.4 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%) Frame = -2 Query: 519 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 370 ++V F + GY H + +N ++ I G IH+ D + E L Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419 Query: 369 SEKSITPMGGFPHYGEVNN 313 SEKS P+ FP V++ Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438 >08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062, 2972354-2972425,2972513-2972631,2972858-2972942, 2973096-2973185,2973268-2973369,2973448-2973624, 2973874-2973954,2974511-2974582,2974662-2974756, 2974831-2974919,2975016-2975078,2975161-2975204, 2975554-2975685 Length = 521 Score = 28.3 bits (60), Expect = 7.4 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 Query: 3 FFFFFFALSNVYFHGLHLRL 62 FFFFFF +N+ FH L+ L Sbjct: 307 FFFFFFFCANILFHHLNYLL 326 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,239,772 Number of Sequences: 37544 Number of extensions: 481775 Number of successful extensions: 1192 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1189 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2127163404 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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