BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G24 (895 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 23 4.3 AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 23 4.3 DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 7.5 AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 22 7.5 AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 22 7.5 AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 22 7.5 EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 9.9 >AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane transporter protein. Length = 669 Score = 22.6 bits (46), Expect = 4.3 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -2 Query: 441 FMHSAERPVVRSYHPRDY 388 F E P R+Y+P DY Sbjct: 310 FFRELEAPCPRNYNPADY 327 >AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane transporter white protein. Length = 669 Score = 22.6 bits (46), Expect = 4.3 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -2 Query: 441 FMHSAERPVVRSYHPRDY 388 F E P R+Y+P DY Sbjct: 310 FFRELEAPCPRNYNPADY 327 >DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. Length = 414 Score = 21.8 bits (44), Expect = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -2 Query: 432 SAERPVVRSYHPRDY 388 SA P+VRSY P Y Sbjct: 281 SAATPLVRSYAPERY 295 >AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain transcription factor Maxillopediaprotein. Length = 523 Score = 21.8 bits (44), Expect = 7.5 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -1 Query: 427 RAAGGAKLPSAGLC 386 ++ G ++PSAGLC Sbjct: 99 KSCQGCEMPSAGLC 112 >AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia ortholog protein. Length = 471 Score = 21.8 bits (44), Expect = 7.5 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -1 Query: 427 RAAGGAKLPSAGLC 386 ++ G ++PSAGLC Sbjct: 47 KSCQGCEMPSAGLC 60 >AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia ortholog protein. Length = 477 Score = 21.8 bits (44), Expect = 7.5 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -1 Query: 427 RAAGGAKLPSAGLC 386 ++ G ++PSAGLC Sbjct: 230 KSCQGCEMPSAGLC 243 >EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglucosaminidase NAG3 protein. Length = 582 Score = 21.4 bits (43), Expect = 9.9 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -1 Query: 715 FIKSLAEXRSTQDTGXGSQAFIATLLFDPSMSALPI 608 FIKSL + + G + I +L DP+ + L + Sbjct: 119 FIKSLESLKPGNQSTPGIKLSINIILSDPNTNKLKL 154 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 160,251 Number of Sequences: 336 Number of extensions: 3210 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 57 effective length of database: 103,433 effective search space used: 24823920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -