Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G21
(818 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 247 1e-65
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 247 1e-65
SB_56| Best HMM Match : Actin (HMM E-Value=0) 247 1e-65
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 246 1e-65
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 245 3e-65
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 245 4e-65
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 216 2e-56
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 80 2e-15
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 5e-12
SB_54| Best HMM Match : Actin (HMM E-Value=0) 58 6e-09
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.6
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.9
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 247 bits (604), Expect = 1e-65
Identities = 113/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE
Sbjct: 220 CPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 279
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
I+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 280 ISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 203 YELPDGQVITIGNE 216
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 247 bits (604), Expect = 1e-65
Identities = 113/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKE
Sbjct: 258 CPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 317
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
IT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 318 ITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 241 YELPDGQVITIGNE 254
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 247 bits (604), Expect = 1e-65
Identities = 113/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKE
Sbjct: 257 CPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 316
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
IT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 317 ITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 240 YELPDGQVITIGNE 253
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 113/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKE
Sbjct: 258 CPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKE 317
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
I+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 318 ISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 241 YELPDGQVITIGNE 254
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 245 bits (600), Expect = 3e-65
Identities = 112/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKE
Sbjct: 231 CPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKE 290
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
I+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 291 ISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 214 YELPDGQVITIGNE 227
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 245 bits (599), Expect = 4e-65
Identities = 112/119 (94%), Positives = 117/119 (98%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKE
Sbjct: 257 CPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKE 316
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
I+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 317 ISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVITIGNE
Sbjct: 240 YELPDGQVITIGNE 253
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 216 bits (528), Expect = 2e-56
Identities = 97/119 (81%), Positives = 108/119 (90%)
Frame = -1
Query: 686 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
CPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKE
Sbjct: 31 CPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKE 90
Query: 506 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 330
I LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 91 IAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 736 YEXPDGQVITIGNE 695
YE PDGQVI+IGNE
Sbjct: 14 YELPDGQVISIGNE 27
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Frame = -1
Query: 683 PEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 507
PE F P F + + E N I C +D+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 206 PEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRD 265
Query: 506 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 375
I + P ++ ++I+ ++Y+VW GGS+LAS F + +K
Sbjct: 266 IKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKA 325
Query: 374 EYDESGPSIVHRKCF*THR 318
+YDE GPSI F HR
Sbjct: 326 DYDEHGPSICRHNPF-LHR 343
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 29/138 (21%)
Frame = -1
Query: 683 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 504
PEALFQP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI
Sbjct: 262 PEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREI 321
Query: 503 TAL---------------------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS- 411
L P T K KI I P RK+ V++GG++LA
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
Query: 410 LSTFQQMWISKQEYDESG 357
+ W++++EY+E G
Sbjct: 382 MKDKDSFWMTRKEYEEKG 399
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 5e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 653 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 474
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 473 KII---APPERKYSVWIGGSILASL 408
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -1
Query: 680 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 552
E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2304 EPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 617 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 462
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 461 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 363
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 614 SIMKCDVDIRKDLYANTVLSGGTTMYPG 531
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 683 PEALFQPSFLGMEACGIHET 624
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 421 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 594
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 595 TS 600
S
Sbjct: 815 AS 816
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 448 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 329
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 406 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 296
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 569 NTVLSGGTTMYPGIADRMQKEITALAP 489
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 403 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 284
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,357,233
Number of Sequences: 59808
Number of extensions: 468212
Number of successful extensions: 1379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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