Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G20
(804 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 171 1e-41
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 111 1e-23
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 65 2e-09
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 63 9e-09
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 59 1e-07
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 53 1e-05
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 52 2e-05
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 50 7e-05
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 50 9e-05
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 48 3e-04
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 44 0.003
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 44 0.005
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 43 0.010
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 42 0.014
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 41 0.042
UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole geno... 36 1.2
UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 35 2.8
UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 2.8
UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 34 3.6
UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr prote... 34 4.8
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.8
UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 171 bits (417), Expect = 1e-41
Identities = 79/122 (64%), Positives = 96/122 (78%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K PVMTYASVVFAHAAR H+ + Q +QSRFCR+AVGAPWFVRNVDLHDDL LESI K
Sbjct: 815 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 874
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTVLLGTS 279
+++S S R+FDKA RH+N LIVAA +Y P+P S RRRP+HV++DP DP+T+ L T
Sbjct: 875 HMKSVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTF 934
Query: 278 ST 273
S+
Sbjct: 935 SS 936
Score = 62.9 bits (146), Expect = 9e-09
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = -1
Query: 804 APKVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIR 625
A KVK LGVTLD+ +T P H PMIC+RSKMSLRNKVTLYKTCIR
Sbjct: 761 ARKVKYLGVTLDASMTFRP-HIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 819
Query: 624 P 622
P
Sbjct: 820 P 820
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 111 bits (268), Expect = 1e-23
Identities = 49/116 (42%), Positives = 74/116 (63%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K PV+TY+ VFAH ++ + Q+ Q+R R G PW++R VDLH +L++ SI
Sbjct: 26 KTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRKVTGTPWYIRRVDLHRNLEIPSIWT 85
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTVL 291
Y++S ++ +F+KAA H +PL+V+A NY P P RRRP+H+ DPPD +T +
Sbjct: 86 YVKSLTISYFEKAANHPSPLVVSAANYQPVP--NAARPRRRPRHIFIDPPDEITAV 139
Score = 44.8 bits (101), Expect = 0.003
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -1
Query: 693 PMICRRSKMSLRNKVTLYKTCIRP 622
P++C +SKMSLR+K+ LYKTCIRP
Sbjct: 8 PLLCHKSKMSLRHKLILYKTCIRP 31
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/110 (33%), Positives = 54/110 (49%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K AP Y ++ A H+K Q IQ++ R+ G WFVRN LH DL L ++
Sbjct: 796 KQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFD 855
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 309
+ S R+ D+ RH N L A P R+ +RR+P+ +I+ P
Sbjct: 856 EINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 62.9 bits (146), Expect = 9e-09
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = -2
Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444
P+ TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + +
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEK 851
Query: 443 SMRHFDKAARHENPL 399
++ +K H NPL
Sbjct: 852 KTKYNEKLTTHTNPL 866
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K AP + Y V+ AA+ HL +I+Q++ R GAPW++R D+ DL + +
Sbjct: 801 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 860
Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
LQ+ + ++ ++ H N L G AD R RR +H D P+
Sbjct: 861 KLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 52.8 bits (121), Expect = 1e-05
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -2
Query: 749 PHIKTVTRSXRLHPRTSLPR*YVGEVKCPLEIR*HSTKLAY--APVMTYASVVFAHAARI 576
PH+K TR R + R R + K + +R + AP+ Y ++ AA+
Sbjct: 766 PHLKATTR--RCYQRMQQLRWLLNR-KSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKS 822
Query: 575 HLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
+ Q++Q+R R P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 823 NYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHA-ARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K P MTYASV +A A + + Q Q++F R A APWFVRN LH ++ + ++
Sbjct: 1268 KSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKMPTME 1327
Query: 461 KYLQSAS 441
++ + +
Sbjct: 1328 EFFRETA 1334
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622
+VK LGV LD +++ P H D + + ++CRRS +S+ NK+ LYK+ IRP
Sbjct: 1216 QVKYLGVILDKKLSFGP-HLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRP 1273
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = -1
Query: 201 PLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTK 67
P+ F SRFRS GRFCEA LLLG VLA S LSP P +
Sbjct: 74 PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNR 118
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2
Query: 368 PADRMESSRRRPKHVISDPPDPLTVLLGTSSTGH 267
P D SRR P HV+SDP D L+VLL SSTG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/82 (25%), Positives = 42/82 (51%)
Frame = -2
Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444
P+++YAS + AA +L +Q++ R APWF+RN +L DL + ++ +++
Sbjct: 396 PILSYASPCWGSAASSNLSHILTVQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKL 455
Query: 443 SMRHFDKAARHENPLIVAAGNY 378
+ ++ NP + +Y
Sbjct: 456 NQDFANRTGTSNNPSLTYTIDY 477
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -1
Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622
++K +G+TLD+ +T H A S+ ++CR++ ++L NK LY + +RP
Sbjct: 339 QIKYMGLTLDTSLTYKT-HLINAANKTKSALKSLNSLLCRKTHLNLANKRLLYLSTLRP 396
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 465
KLA P+ TY F A+ HL+ Q++Q++F RI + + R DLH + + SI
Sbjct: 804 KLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIVLNKTRYERITDLHTEAKIPSI 861
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -1
Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622
+ K LG+ +D+R+T P H + ++ P+I R ++ +RNK+ +YK IRP
Sbjct: 752 EAKYLGMVIDNRVTLKP-HVEYVTNRAHTALRQLYPLISRNLQLDVRNKLLIYKLAIRP 809
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -1
Query: 795 VKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622
VK LGV LD +++ P H D + + ++CRRS +S+ NK+ LYK+ IRP
Sbjct: 308 VKYLGVILDKKLSFGP-HLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRP 364
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -1
Query: 249 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRF 142
SL T G +++ R PLSFSPDLLSGSRFR+G +
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 42.7 bits (96), Expect = 0.010
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
K +P+ YA ++ + K Q +++++ R + A + R D+ +++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336
+ AS R+ + HENPLI + Y P +R+E S+ R
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 42.3 bits (95), Expect = 0.014
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = -2
Query: 620 VMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSAS 441
+ TYA V+ A HLK + R R + PW++RN + ++ + S ++ +
Sbjct: 1129 IQTYAIPVWGAAGESHLKPIEGSFFRMLRSILDIPWYIRNKQILKEVAITSPNQAAPIFA 1188
Query: 440 MRHFDKAARHENPLIVAAGNY 378
+ D H NP IVA Y
Sbjct: 1189 AKLHDSMKNHCNPTIVATTTY 1209
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1
- Drosophila melanogaster (Fruit fly)
Length = 884
Score = 40.7 bits (91), Expect = 0.042
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = -2
Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459
K + P++ Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + +
Sbjct: 821 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
Query: 458 YLQ 450
+Q
Sbjct: 881 KIQ 883
Score = 33.1 bits (72), Expect = 8.4
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -1
Query: 795 VKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622
++ LG+ D ++T H + + P+I R+SK+S+ NK+ ++KT P
Sbjct: 770 IRYLGIIFDKKLTFKY-HINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 826
>UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=8; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 507
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -2
Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444
P++ VF H RIH + I++ C V PWF N+DL D ++ Y+ S+
Sbjct: 33 PLLGMFPSVFLHLHRIHDRVTDILEKSGCTFLVKGPWFC-NMDLLVTTDPANV-HYIMSS 90
Query: 443 SMRHFDKAA 417
+F K +
Sbjct: 91 HFSNFPKGS 99
>UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix
protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class
B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus
tropicalis
Length = 195
Score = 34.7 bits (76), Expect = 2.8
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2
Query: 551 QSRFCRIAVGAPWFVRNVDLHDDLD-LESISKYLQSASMRHFDKAARHENPLIVAAGNYI 375
+ R R+++ A R DL+D LD L S+ Y S S+R K A ++ A NYI
Sbjct: 86 ERRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYI 140
Query: 374 PDPADRMESSRRRPKHVISDPP 309
A +E RR ++ PP
Sbjct: 141 LMQAQALEEMRRLVAYLNQGPP 162
>UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 156
Score = 34.7 bits (76), Expect = 2.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -2
Query: 497 DLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPA----DRMESSRRRPK 330
+L D D E + S H + A P I+A G Y+ P+ ++E R R
Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139
Query: 329 HVISDPPDPLTVL 291
H SD PDPL L
Sbjct: 140 HSDSDTPDPLMKL 152
>UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YBR225W - Saccharomyces cerevisiae (Baker's yeast)
Length = 900
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -2
Query: 416 RHENPLIVAAGNYIPDPA---DRMESSRRRPKHVISDPPDPLTVLL 288
+H NP I N I DP +++ P+ VISDP D + +LL
Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402
>UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr protein;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
Ngfr protein - Monodelphis domestica
Length = 449
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +2
Query: 350 FPFCPQDRECSYRRPR*EGSRVV-------PLYRSGAWTPT 451
FP+C Q R C PR +GSR + P SGAW P+
Sbjct: 19 FPYCAQQRTCGLLEPRLQGSRCLENEPSSEPRRASGAWHPS 59
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 33.9 bits (74), Expect = 4.8
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -2
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333
F + D HD + + + + S+ H D LI A G IP A + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763
Query: 332 KHVISDPPDPLTVLLGTS 279
HVI D PD LT LGT+
Sbjct: 1764 DHVIIDTPDALTAALGTA 1781
>UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1857
Score = 33.5 bits (73), Expect = 6.4
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -2
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333
F+ ++DL D D++S S+ + N L++AA P DR
Sbjct: 1520 FLNSLDLKQDNDVDS-----SSSRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNLEV 1574
Query: 332 KHVISDPPDPLTVLLGT 282
+ V ++PP+P V+ GT
Sbjct: 1575 QQVATEPPNPGNVINGT 1591
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,110,716
Number of Sequences: 1657284
Number of extensions: 14401005
Number of successful extensions: 35729
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 34283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35718
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -