BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G20 (804 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 171 1e-41 UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 111 1e-23 UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 65 2e-09 UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 63 9e-09 UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 59 1e-07 UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 53 1e-05 UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 52 2e-05 UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 50 7e-05 UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 50 9e-05 UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 48 3e-04 UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 44 0.003 UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 44 0.005 UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 43 0.010 UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 42 0.014 UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 41 0.042 UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole geno... 36 1.2 UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 35 2.8 UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 2.8 UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 34 3.6 UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr prote... 34 4.8 UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.8 UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4 >UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth) Length = 960 Score = 171 bits (417), Expect = 1e-41 Identities = 79/122 (64%), Positives = 96/122 (78%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459 K PVMTYASVVFAHAAR H+ + Q +QSRFCR+AVGAPWFVRNVDLHDDL LESI K Sbjct: 815 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 874 Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTVLLGTS 279 +++S S R+FDKA RH+N LIVAA +Y P+P S RRRP+HV++DP DP+T+ L T Sbjct: 875 HMKSVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTF 934 Query: 278 ST 273 S+ Sbjct: 935 SS 936 Score = 62.9 bits (146), Expect = 9e-09 Identities = 36/61 (59%), Positives = 39/61 (63%) Frame = -1 Query: 804 APKVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIR 625 A KVK LGVTLD+ +T P H PMIC+RSKMSLRNKVTLYKTCIR Sbjct: 761 ARKVKYLGVTLDASMTFRP-HIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 819 Query: 624 P 622 P Sbjct: 820 P 820 >UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea mylitta|Rep: Reverse transcriptase-like - Antheraea mylitta (Tasar silkworm) Length = 186 Score = 111 bits (268), Expect = 1e-23 Identities = 49/116 (42%), Positives = 74/116 (63%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459 K PV+TY+ VFAH ++ + Q+ Q+R R G PW++R VDLH +L++ SI Sbjct: 26 KTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRKVTGTPWYIRRVDLHRNLEIPSIWT 85 Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTVL 291 Y++S ++ +F+KAA H +PL+V+A NY P P RRRP+H+ DPPD +T + Sbjct: 86 YVKSLTISYFEKAANHPSPLVVSAANYQPVP--NAARPRRRPRHIFIDPPDEITAV 139 Score = 44.8 bits (101), Expect = 0.003 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = -1 Query: 693 PMICRRSKMSLRNKVTLYKTCIRP 622 P++C +SKMSLR+K+ LYKTCIRP Sbjct: 8 PLLCHKSKMSLRHKLILYKTCIRP 31 >UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from transposon X-element; n=1; Drosophila melanogaster|Rep: Probable RNA-directed DNA polymerase from transposon X-element - Drosophila melanogaster (Fruit fly) Length = 908 Score = 65.3 bits (152), Expect = 2e-09 Identities = 37/110 (33%), Positives = 54/110 (49%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459 K AP Y ++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ Sbjct: 796 KQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFD 855 Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 309 + S R+ D+ RH N L A P R+ +RR+P+ +I+ P Sbjct: 856 EINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901 >UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep: GH03753p - Drosophila melanogaster (Fruit fly) Length = 888 Score = 62.9 bits (146), Expect = 9e-09 Identities = 26/75 (34%), Positives = 45/75 (60%) Frame = -2 Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444 P+ TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEK 851 Query: 443 SMRHFDKAARHENPL 399 ++ +K H NPL Sbjct: 852 KTKYNEKLTTHTNPL 866 >UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA polymerase from mobile element jockey - Drosophila melanogaster (Fruit fly) Length = 916 Score = 59.3 bits (137), Expect = 1e-07 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459 K AP + Y V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + Sbjct: 801 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 860 Query: 458 YLQSASMRHFDKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 306 LQ+ + ++ ++ H N L G AD R RR +H D P+ Sbjct: 861 KLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912 >UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from transposon BS; n=7; melanogaster subgroup|Rep: Probable RNA-directed DNA polymerase from transposon BS - Drosophila melanogaster (Fruit fly) Length = 906 Score = 52.8 bits (121), Expect = 1e-05 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%) Frame = -2 Query: 749 PHIKTVTRSXRLHPRTSLPR*YVGEVKCPLEIR*HSTKLAY--APVMTYASVVFAHAARI 576 PH+K TR R + R R + K + +R + AP+ Y ++ AA+ Sbjct: 766 PHLKATTR--RCYQRMQQLRWLLNR-KSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKS 822 Query: 575 HLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399 + Q++Q+R R P++VR LH DL+L ++ + + + R+ D+ RH + L Sbjct: 823 NYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881 >UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) - Tribolium castaneum Length = 1336 Score = 52.0 bits (119), Expect = 2e-05 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHA-ARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462 K P MTYASV +A A + + Q Q++F R A APWFVRN LH ++ + ++ Sbjct: 1268 KSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKMPTME 1327 Query: 461 KYLQSAS 441 ++ + + Sbjct: 1328 EFFRETA 1334 Score = 44.8 bits (101), Expect = 0.003 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = -1 Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622 +VK LGV LD +++ P H D + + ++CRRS +S+ NK+ LYK+ IRP Sbjct: 1216 QVKYLGVILDKKLSFGP-HLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRP 1273 >UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth) Length = 191 Score = 50.0 bits (114), Expect = 7e-05 Identities = 25/45 (55%), Positives = 27/45 (60%) Frame = -1 Query: 201 PLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTK 67 P+ F SRFRS GRFCEA LLLG VLA S LSP P + Sbjct: 74 PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNR 118 Score = 44.0 bits (99), Expect = 0.005 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = -2 Query: 368 PADRMESSRRRPKHVISDPPDPLTVLLGTSSTGH 267 P D SRR P HV+SDP D L+VLL SSTG+ Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59 >UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) - Tribolium castaneum Length = 494 Score = 49.6 bits (113), Expect = 9e-05 Identities = 21/82 (25%), Positives = 42/82 (51%) Frame = -2 Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444 P+++YAS + AA +L +Q++ R APWF+RN +L DL + ++ +++ Sbjct: 396 PILSYASPCWGSAASSNLSHILTVQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKL 455 Query: 443 SMRHFDKAARHENPLIVAAGNY 378 + ++ NP + +Y Sbjct: 456 NQDFANRTGTSNNPSLTYTIDY 477 Score = 35.1 bits (77), Expect = 2.1 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = -1 Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622 ++K +G+TLD+ +T H A S+ ++CR++ ++L NK LY + +RP Sbjct: 339 QIKYMGLTLDTSLTYKT-HLINAANKTKSALKSLNSLLCRKTHLNLANKRLLYLSTLRP 396 >UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80; Culicimorpha|Rep: Reverse transcriptase homolog protein - Chironomus thummi Length = 883 Score = 48.0 bits (109), Expect = 3e-04 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 465 KLA P+ TY F A+ HL+ Q++Q++F RI + + R DLH + + SI Sbjct: 804 KLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIVLNKTRYERITDLHTEAKIPSI 861 Score = 37.5 bits (83), Expect = 0.39 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -1 Query: 798 KVKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622 + K LG+ +D+R+T P H + ++ P+I R ++ +RNK+ +YK IRP Sbjct: 752 EAKYLGMVIDNRVTLKP-HVEYVTNRAHTALRQLYPLISRNLQLDVRNKLLIYKLAIRP 809 >UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) - Tribolium castaneum Length = 421 Score = 44.4 bits (100), Expect = 0.003 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1 Query: 795 VKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622 VK LGV LD +++ P H D + + ++CRRS +S+ NK+ LYK+ IRP Sbjct: 308 VKYLGVILDKKLSFGP-HLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRP 364 >UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth) Length = 782 Score = 44.0 bits (99), Expect = 0.005 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = -1 Query: 249 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRF 142 SL T G +++ R PLSFSPDLLSGSRFR+G + Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415 >UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep: Pol protein - Drosophila melanogaster (Fruit fly) Length = 1103 Score = 42.7 bits (96), Expect = 0.010 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462 K +P+ YA ++ + K Q +++++ R + A + R D+ +++S Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918 Query: 461 KYLQSASMRHFDKAARHENPLI--VAAGNYIPDPADRMESSRRR 336 + AS R+ + HENPLI + Y P +R+E S+ R Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959 >UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to polyprotein - Nasonia vitripennis Length = 1249 Score = 42.3 bits (95), Expect = 0.014 Identities = 23/81 (28%), Positives = 37/81 (45%) Frame = -2 Query: 620 VMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSAS 441 + TYA V+ A HLK + R R + PW++RN + ++ + S ++ + Sbjct: 1129 IQTYAIPVWGAAGESHLKPIEGSFFRMLRSILDIPWYIRNKQILKEVAITSPNQAAPIFA 1188 Query: 440 MRHFDKAARHENPLIVAAGNY 378 + D H NP IVA Y Sbjct: 1189 AKLHDSMKNHCNPTIVATTTY 1209 >UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1 - Drosophila melanogaster (Fruit fly) Length = 884 Score = 40.7 bits (91), Expect = 0.042 Identities = 15/63 (23%), Positives = 33/63 (52%) Frame = -2 Query: 638 KLAYAPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 459 K + P++ Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + Sbjct: 821 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880 Query: 458 YLQ 450 +Q Sbjct: 881 KIQ 883 Score = 33.1 bits (72), Expect = 8.4 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = -1 Query: 795 VKXLGVTLDSRITXPPPHQDGNAIXPPSS*DVFTPMICRRSKMSLRNKVTLYKTCIRP 622 ++ LG+ D ++T H + + P+I R+SK+S+ NK+ ++KT P Sbjct: 770 IRYLGIIFDKKLTFKY-HINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 826 >UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=8; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 507 Score = 35.9 bits (79), Expect = 1.2 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = -2 Query: 623 PVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSA 444 P++ VF H RIH + I++ C V PWF N+DL D ++ Y+ S+ Sbjct: 33 PLLGMFPSVFLHLHRIHDRVTDILEKSGCTFLVKGPWFC-NMDLLVTTDPANV-HYIMSS 90 Query: 443 SMRHFDKAA 417 +F K + Sbjct: 91 HFSNFPKGS 99 >UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus tropicalis Length = 195 Score = 34.7 bits (76), Expect = 2.8 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = -2 Query: 551 QSRFCRIAVGAPWFVRNVDLHDDLD-LESISKYLQSASMRHFDKAARHENPLIVAAGNYI 375 + R R+++ A R DL+D LD L S+ Y S S+R K A ++ A NYI Sbjct: 86 ERRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYI 140 Query: 374 PDPADRMESSRRRPKHVISDPP 309 A +E RR ++ PP Sbjct: 141 LMQAQALEEMRRLVAYLNQGPP 162 >UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5 SCAF14581, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 156 Score = 34.7 bits (76), Expect = 2.8 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Frame = -2 Query: 497 DLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPA----DRMESSRRRPK 330 +L D D E + S H + A P I+A G Y+ P+ ++E R R Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139 Query: 329 HVISDPPDPLTVL 291 H SD PDPL L Sbjct: 140 HSDSDTPDPLMKL 152 >UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; Saccharomyces cerevisiae|Rep: Uncharacterized protein YBR225W - Saccharomyces cerevisiae (Baker's yeast) Length = 900 Score = 34.3 bits (75), Expect = 3.6 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -2 Query: 416 RHENPLIVAAGNYIPDPA---DRMESSRRRPKHVISDPPDPLTVLL 288 +H NP I N I DP +++ P+ VISDP D + +LL Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402 >UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr protein; n=1; Monodelphis domestica|Rep: PREDICTED: similar to Ngfr protein - Monodelphis domestica Length = 449 Score = 33.9 bits (74), Expect = 4.8 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%) Frame = +2 Query: 350 FPFCPQDRECSYRRPR*EGSRVV-------PLYRSGAWTPT 451 FP+C Q R C PR +GSR + P SGAW P+ Sbjct: 19 FPYCAQQRTCGLLEPRLQGSRCLENEPSSEPRRASGAWHPS 59 >UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales bacterium SWAT-3 Length = 4022 Score = 33.9 bits (74), Expect = 4.8 Identities = 25/78 (32%), Positives = 34/78 (43%) Frame = -2 Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333 F + D HD + + + + S+ H D LI A G IP A + + Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763 Query: 332 KHVISDPPDPLTVLLGTS 279 HVI D PD LT LGT+ Sbjct: 1764 DHVIIDTPDALTAALGTA 1781 >UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; Lyngbya sp. PCC 8106|Rep: Putative uncharacterized protein - Lyngbya sp. PCC 8106 Length = 1857 Score = 33.5 bits (73), Expect = 6.4 Identities = 21/77 (27%), Positives = 35/77 (45%) Frame = -2 Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333 F+ ++DL D D++S S+ + N L++AA P DR Sbjct: 1520 FLNSLDLKQDNDVDS-----SSSRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNLEV 1574 Query: 332 KHVISDPPDPLTVLLGT 282 + V ++PP+P V+ GT Sbjct: 1575 QQVATEPPNPGNVINGT 1591 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 724,110,716 Number of Sequences: 1657284 Number of extensions: 14401005 Number of successful extensions: 35729 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 34283 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 35718 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 69143070360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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