BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G20 (804 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0125 + 1001397-1001865,1002743-1002810,1003359-1003490,100... 31 1.4 09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 30 1.9 03_05_0844 + 28139996-28140736 30 2.5 11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331... 29 4.3 05_01_0536 - 4622767-4622865,4623550-4623673,4624571-4624685,462... 28 7.6 01_06_0475 + 29610268-29610711 28 7.6 >08_01_0125 + 1001397-1001865,1002743-1002810,1003359-1003490, 1003649-1003810,1003973-1004260 Length = 372 Score = 30.7 bits (66), Expect = 1.4 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = -1 Query: 306 STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRFCEARL 127 S NG R P SS +L +G L+L S F P SG+R RSGG Sbjct: 200 SANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGS---FMPTENSGTRSRSGGMSVSLAS 256 Query: 126 LLGFVLATS-SGLSPVSSPTKV 64 G V+ +GL +SP ++ Sbjct: 257 PDGRVVGGGVAGLLVAASPVQI 278 >09_06_0351 + 22466160-22466217,22466514-22467052,22467186-22467293, 22467391-22467546,22467916-22468131,22468639-22468776, 22468880-22468981,22469089-22469146,22469346-22469408, 22469543-22469640 Length = 511 Score = 30.3 bits (65), Expect = 1.9 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 467 ISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPK-HVISDP 312 +S Y +S SM F +AR P++ ++ NY+ RRR + + SDP Sbjct: 53 VSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDP 105 >03_05_0844 + 28139996-28140736 Length = 246 Score = 29.9 bits (64), Expect = 2.5 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = -1 Query: 201 PLSFSP----DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTKVKATLK-*PLG 37 PLSF P D G R +G R+C L + A + G+ +PT KA + PLG Sbjct: 21 PLSFLPVDHADYSGGRRMEAGARWCSDSLARRWAKA-AGGVRAPPTPTLAKAERRQAPLG 79 Query: 36 LS 31 LS Sbjct: 80 LS 81 >11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662, 3315283-3315792,3315888-3317423,3317505-3317573, 3317742-3317807,3318517-3318640,3319464-3319690 Length = 958 Score = 29.1 bits (62), Expect = 4.3 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -1 Query: 246 LATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 76 L TKG +T+ H P+ FSP S G E+ L + S GL P+S+ Sbjct: 203 LETKGKRLSVTVTHFPMIFSPISSRTFVLPSEGTMAESCLSNHHEDSLSPGLPPIST 259 >05_01_0536 - 4622767-4622865,4623550-4623673,4624571-4624685, 4624784-4625028,4625081-4625316 Length = 272 Score = 28.3 bits (60), Expect = 7.6 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Frame = -2 Query: 551 QSRFCRIAV-GAPWFVRNVDLHDDLDLESISKYLQSASMRHFD--KAARHENPLI--VAA 387 +++F ++AV GAP ++R VDL + + LQ HF K E L+ V+ Sbjct: 118 KAKFVKVAVDGAP-YLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSG 176 Query: 386 GNYIPDPADR 357 Y+P D+ Sbjct: 177 NEYVPTYEDK 186 >01_06_0475 + 29610268-29610711 Length = 147 Score = 28.3 bits (60), Expect = 7.6 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -1 Query: 270 SPFSSNPSLATKGSTSKLTLRHSPLSFSPD 181 SP SS+P S+++ TL HSP S SPD Sbjct: 54 SPMSSSPP---SRSSTRATLTHSPSSASPD 80 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,507,459 Number of Sequences: 37544 Number of extensions: 435467 Number of successful extensions: 1107 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1107 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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