BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G14 (801 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 48 3e-05 AY552790-1|AAT00538.1| 271|Homo sapiens CD200 cell surface glyc... 32 2.1 AY284976-1|AAQ19773.1| 250|Homo sapiens CD200 cell surface glyc... 32 2.1 BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 4.8 BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 8.5 AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 8.5 >BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MGC:134704) protein. Length = 44 Score = 48.4 bits (110), Expect = 3e-05 Identities = 22/24 (91%), Positives = 23/24 (95%) Frame = +3 Query: 591 MIGRADIEGSKSNVAMNAWLPQAS 662 MIGRADIEGSKS+VAMNAW PQAS Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQAS 24 >AY552790-1|AAT00538.1| 271|Homo sapiens CD200 cell surface glycoprotein receptor isoform 2 variant 2 protein. Length = 271 Score = 32.3 bits (70), Expect = 2.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 108 GSHLQTIPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASR 248 G HLQ + +P++ L R AV + KP A IS I G +A++ Sbjct: 137 GYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATK 183 >AY284976-1|AAQ19773.1| 250|Homo sapiens CD200 cell surface glycoprotein receptor isoform 2 protein. Length = 250 Score = 32.3 bits (70), Expect = 2.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 108 GSHLQTIPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASR 248 G HLQ + +P++ L R AV + KP A IS I G +A++ Sbjct: 116 GYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATK 162 >BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerevisiae) protein. Length = 619 Score = 31.1 bits (67), Expect = 4.8 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +2 Query: 41 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 175 +G S R +HD+ PS PR+ R S+D S PR PD R Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254 >BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. Length = 322 Score = 30.3 bits (65), Expect = 8.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 Query: 368 TPLRPKPA*PNPARICSLWSPESRE 294 TP P P P PA +CS SPE R+ Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92 >AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type containing 12 protein. Length = 210 Score = 30.3 bits (65), Expect = 8.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 Query: 368 TPLRPKPA*PNPARICSLWSPESRE 294 TP P P P PA +CS SPE R+ Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 121,191,602 Number of Sequences: 237096 Number of extensions: 2681024 Number of successful extensions: 6027 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5777 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6020 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9869080686 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -