Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G12
(803 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 138 2e-31
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 94 4e-18
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 64 4e-09
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 60 6e-08
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 58 2e-07
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 58 3e-07
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 57 5e-07
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 49 1e-04
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 46 0.001
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 44 0.005
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 44 0.005
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 44 0.005
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 44 0.006
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 40 0.073
UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus i... 36 1.6
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 35 2.1
UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 35 2.8
UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 2.8
UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 34 3.6
UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr prote... 34 4.8
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.8
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 33 6.4
UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 33 8.4
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 138 bits (333), Expect = 2e-31
Identities = 62/100 (62%), Positives = 79/100 (79%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
+ + Q +QSRFCR+AVGAPWFVRNVDLHDDL LESI K+++S S R+FDKA RH+N LIV
Sbjct: 837 IDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIV 896
Query: 392 AAGNYIPDPADRMESSRRRPKHVISDPPDPLTVLLGTSST 273
AA +Y P+P S RRRP+HV++DP DP+T+ L T S+
Sbjct: 897 AAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTFSS 936
Score = 129 bits (311), Expect = 9e-29
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
MTFRPHIKTVR RAAFILGRLYPMIC+RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR
Sbjct: 775 MTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 834
Query: 579 IHFKILSNYSIPF 541
H L + F
Sbjct: 835 THIDTLQSLQSRF 847
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 93.9 bits (223), Expect = 4e-18
Identities = 40/90 (44%), Positives = 60/90 (66%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGN 381
Q+ Q+R R G PW++R VDLH +L++ SI Y++S ++ +F+KAA H +PL+V+A N
Sbjct: 52 QVFQNRVLRKVTGTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAAN 111
Query: 380 YIPDPADRMESSRRRPKHVISDPPDPLTVL 291
Y P P RRRP+H+ DPPD +T +
Sbjct: 112 YQPVP--NAARPRRRPRHIFIDPPDEITAV 139
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/47 (61%), Positives = 41/47 (87%)
Frame = -3
Query: 711 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHF 571
+LGRL+P++C +SKMSLR+K+ LYKTCIRPV+TY+ VFAH ++ +F
Sbjct: 2 VLGRLHPLLCHKSKMSLRHKLILYKTCIRPVITYSCPVFAHMSKDNF 48
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 586
+R+T +PH++ V RA L +LYP+I R ++ +RNK+ +YK IRP+ TY F
Sbjct: 762 NRVTLKPHVEYVTNRAHTALRQLYPLISRNLQLDVRNKLLIYKLAIRPIFTYGCSAFGSM 821
Query: 585 ARIHFKILSNYSIPFLQ 535
A+ H + L FL+
Sbjct: 822 AKTHLQKLQVLQNKFLR 838
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA- 586
+++F PH+ + G L ++CRRS +S+ NK+ LYK+ IRP MTYASV +A A
Sbjct: 1227 KLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYASVAWAFAP 1286
Query: 585 ARIHFKILSNYSIPFLQDS 529
+ L + FL+ +
Sbjct: 1287 CKTRMHKLQTFQNKFLRQA 1305
Score = 37.9 bits (84), Expect = 0.30
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSAS 441
+ Q Q++F R A APWFVRN LH ++ + ++ ++ + +
Sbjct: 1291 MHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKMPTMEEFFRETA 1334
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A
Sbjct: 780 KLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCA 839
Query: 582 RIHFKIL 562
+ H K L
Sbjct: 840 QTHIKKL 846
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 586
+++F PH+ + G L ++CRRS +S+ NK+ LYK+ IRP MTYA V +A A
Sbjct: 318 KLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYAPVAWAFA 376
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 57.2 bits (132), Expect = 5e-07
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+ D+ RH N L
Sbjct: 818 IKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLAS 877
Query: 392 AAGNYIPDPADRMESSRRRPKHVISDPP 309
A P R+ +RR+P+ +I+ P
Sbjct: 878 ALNR--SRPPRRL--NRRQPRDLITRSP 901
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y ++ A
Sbjct: 755 RLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLAC 814
Query: 582 RIHFK 568
H K
Sbjct: 815 DSHIK 819
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
Q QSR RI GAPW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 813 QRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A+
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 582 RIHFKIL 562
R + I+
Sbjct: 806 RSNIDII 812
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
L +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ ++ H N L
Sbjct: 823 LNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLAR 882
Query: 392 AAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
G AD R RR +H D P+
Sbjct: 883 KLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
Score = 41.1 bits (92), Expect = 0.032
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y V+ AA
Sbjct: 760 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 819
Query: 582 RIH 574
+ H
Sbjct: 820 KSH 822
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -3
Query: 249 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRF 142
SL T G +++ R PLSFSPDLLSGSRFR+G +
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1
Query: 368 PADRMESSRRRPKHVISDPPDPLTVLLGTSSTGH 267
P D SRR P HV+SDP D L+VLL SSTG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -3
Query: 201 PLSFSPDLLSGSRFRSGGRFCEARLLLGFVLA 106
P+ F SRFRS GRFCEA LLLG VLA
Sbjct: 74 PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLA 105
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+TF PH+K R + +L ++ R+S M+LR K +Y C+ P+ Y ++ AA
Sbjct: 761 RLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAA 820
Query: 582 RIHF---KILSNYSIPFLQD 532
+ ++ ++L N ++ + D
Sbjct: 821 KSNYNRIQVLQNRAMRAITD 840
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
Q++Q+R R P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 828 QVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
+T++ H+ + L L ++CR++ ++L NK LY + +RP+++YAS + AA
Sbjct: 351 LTYKTHLINAANKTKSALKSLNSLLCRKTHLNLANKRLLYLSTLRPILSYASPCWGSAA 409
Score = 37.1 bits (82), Expect = 0.52
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -1
Query: 554 IQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNY 378
+Q++ R APWF+RN +L DL + ++ +++ + ++ NP + +Y
Sbjct: 419 VQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSLTYTIDY 477
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 39.9 bits (89), Expect = 0.073
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 569 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 396
K Q +++++ R + A + R D+ +++S + AS R+ + HENPLI
Sbjct: 883 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942
Query: 395 VAAGNYIPDPADRMESSRRR 336
+ Y P +R+E S+ R
Sbjct: 943 LLINAYKP---NRLELSKNR 959
>UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus
immersus|Rep: Reverse transcriptase - Ascobolus immersus
Length = 746
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVF 595
+++FRPH++ A L L + ++L N LY+ CI PV+ + S V+
Sbjct: 400 KLSFRPHVENRIAAAGRALSSLLRLSTTEKGLTLSNMRQLYQACILPVIDFGSEVW 455
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSK-MSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
+TF HI +V +A LG L + C S M L+ TL+ + +R ++ Y SVV++ A
Sbjct: 62 LTFSHHIDSVVNQARKTLGLLKKIACDFSDPMCLK---TLFCSLVRSILEYCSVVWSPTA 118
Query: 582 RIH 574
R H
Sbjct: 119 RTH 121
>UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix
protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class
B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus
tropicalis
Length = 195
Score = 34.7 bits (76), Expect = 2.8
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 551 QSRFCRIAVGAPWFVRNVDLHDDLD-LESISKYLQSASMRHFDKAARHENPLIVAAGNYI 375
+ R R+++ A R DL+D LD L S+ Y S S+R K A ++ A NYI
Sbjct: 86 ERRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYI 140
Query: 374 PDPADRMESSRRRPKHVISDPP 309
A +E RR ++ PP
Sbjct: 141 LMQAQALEEMRRLVAYLNQGPP 162
>UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 156
Score = 34.7 bits (76), Expect = 2.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -1
Query: 497 DLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPA----DRMESSRRRPK 330
+L D D E + S H + A P I+A G Y+ P+ ++E R R
Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139
Query: 329 HVISDPPDPLTVL 291
H SD PDPL L
Sbjct: 140 HSDSDTPDPLMKL 152
>UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YBR225W - Saccharomyces cerevisiae (Baker's yeast)
Length = 900
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 416 RHENPLIVAAGNYIPDPA---DRMESSRRRPKHVISDPPDPLTVLL 288
+H NP I N I DP +++ P+ VISDP D + +LL
Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402
>UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr protein;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
Ngfr protein - Monodelphis domestica
Length = 449
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +2
Query: 350 FPFCPQDRECSYRRPR*EGSRVV-------PLYRSGAWTPT 451
FP+C Q R C PR +GSR + P SGAW P+
Sbjct: 19 FPYCAQQRTCGLLEPRLQGSRCLENEPSSEPRRASGAWHPS 59
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 33.9 bits (74), Expect = 4.8
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333
F + D HD + + + + S+ H D LI A G IP A + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763
Query: 332 KHVISDPPDPLTVLLGTS 279
HVI D PD LT LGT+
Sbjct: 1764 DHVIIDTPDALTAALGTA 1781
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 33.5 bits (73), Expect = 6.4
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRSKMS--LRNKVTLYKTCIRPVMTYASVVFA 592
HI V RA GR MICR K S + + V +Y T IRP++ YAS +++
Sbjct: 983 HISDVVSRA----GRRIFMICRLRKASVPMHDLVNIYSTYIRPLLEYASPLWS 1031
>UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1857
Score = 33.5 bits (73), Expect = 6.4
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -1
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRP 333
F+ ++DL D D++S S+ + N L++AA P DR
Sbjct: 1520 FLNSLDLKQDNDVDS-----SSSRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNLEV 1574
Query: 332 KHVISDPPDPLTVLLGT 282
+ V ++PP+P V+ GT
Sbjct: 1575 QQVATEPPNPGNVINGT 1591
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 33.1 bits (72), Expect = 8.4
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -3
Query: 729 RXRAAFILGRLYPMI--CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
+ A+FI+ + +I ++ + K+TLYK C+RP + Y S +F++
Sbjct: 738 KAHASFIISKARRLIGFITKNFFTTDAKLTLYKICVRPSLEYCSFIFSN 786
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,241,407
Number of Sequences: 1657284
Number of extensions: 13482045
Number of successful extensions: 32455
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 31124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32444
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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