BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G12 (803 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 30 1.9 08_01_0125 + 1001397-1001865,1002743-1002810,1003359-1003490,100... 29 3.3 05_01_0536 - 4622767-4622865,4623550-4623673,4624571-4624685,462... 28 7.6 01_06_0475 + 29610268-29610711 28 7.6 10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 10.0 >09_06_0351 + 22466160-22466217,22466514-22467052,22467186-22467293, 22467391-22467546,22467916-22468131,22468639-22468776, 22468880-22468981,22469089-22469146,22469346-22469408, 22469543-22469640 Length = 511 Score = 30.3 bits (65), Expect = 1.9 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 467 ISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPK-HVISDP 312 +S Y +S SM F +AR P++ ++ NY+ RRR + + SDP Sbjct: 53 VSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDP 105 >08_01_0125 + 1001397-1001865,1002743-1002810,1003359-1003490, 1003649-1003810,1003973-1004260 Length = 372 Score = 29.5 bits (63), Expect = 3.3 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -3 Query: 306 STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGG 148 S NG R P SS +L +G L+L S F P SG+R RSGG Sbjct: 200 SANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGS---FMPTENSGTRSRSGG 249 >05_01_0536 - 4622767-4622865,4623550-4623673,4624571-4624685, 4624784-4625028,4625081-4625316 Length = 272 Score = 28.3 bits (60), Expect = 7.6 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Frame = -1 Query: 551 QSRFCRIAV-GAPWFVRNVDLHDDLDLESISKYLQSASMRHFD--KAARHENPLI--VAA 387 +++F ++AV GAP ++R VDL + + LQ HF K E L+ V+ Sbjct: 118 KAKFVKVAVDGAP-YLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSG 176 Query: 386 GNYIPDPADR 357 Y+P D+ Sbjct: 177 NEYVPTYEDK 186 >01_06_0475 + 29610268-29610711 Length = 147 Score = 28.3 bits (60), Expect = 7.6 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -3 Query: 270 SPFSSNPSLATKGSTSKLTLRHSPLSFSPD 181 SP SS+P S+++ TL HSP S SPD Sbjct: 54 SPMSSSPP---SRSSTRATLTHSPSSASPD 80 >10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326, 9169201-9169299,9169969-9171361 Length = 677 Score = 27.9 bits (59), Expect = 10.0 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -2 Query: 646 TLQNLHTPRHDLCKCSVRSR 587 T+QNL+ PR DLC+ S S+ Sbjct: 5 TIQNLYAPRADLCEPSCSSK 24 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,681,326 Number of Sequences: 37544 Number of extensions: 407595 Number of successful extensions: 1023 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 998 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1023 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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