Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G12
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_29819| Best HMM Match : Ribosomal_L39 (HMM E-Value=4.1) 32 0.47
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_39284| Best HMM Match : WW (HMM E-Value=7.9) 32 0.63
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_56417| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_34112| Best HMM Match : RVT_1 (HMM E-Value=0.041) 31 0.83
SB_42738| Best HMM Match : 7tm_1 (HMM E-Value=0.89) 31 0.83
SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_54561| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6) 31 1.4
SB_25871| Best HMM Match : SLH (HMM E-Value=1.1) 31 1.4
SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17) 31 1.4
SB_56531| Best HMM Match : SLH (HMM E-Value=1.1) 31 1.4
SB_38574| Best HMM Match : WW (HMM E-Value=4.9) 31 1.4
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 31 1.4
SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011) 30 1.9
SB_5462| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031) 30 1.9
SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 30 2.5
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_1670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_47925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_42199| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06) 29 4.4
SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42) 29 4.4
SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_4872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_58494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54439| Best HMM Match : SNF (HMM E-Value=0) 29 4.4
SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43) 29 4.4
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_27484| Best HMM Match : RVT_1 (HMM E-Value=0.035) 29 4.4
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 4.4
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 4.4
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_8964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13) 29 5.8
SB_53893| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015) 29 5.8
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 29 5.8
SB_23846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_23375| Best HMM Match : PCI (HMM E-Value=9.5) 29 5.8
SB_8006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_7179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_7051| Best HMM Match : RVT_1 (HMM E-Value=0.064) 29 5.8
SB_6318| Best HMM Match : RVT_1 (HMM E-Value=0.72) 29 5.8
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 29 5.8
SB_777| Best HMM Match : DUF1126 (HMM E-Value=5.1) 29 5.8
SB_51865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_37723| Best HMM Match : RVT_1 (HMM E-Value=0.054) 29 5.8
SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1) 29 5.8
SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08) 29 5.8
SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94) 29 5.8
SB_53921| Best HMM Match : Viral_P18 (HMM E-Value=2.6) 28 7.7
SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
SB_36270| Best HMM Match : Viral_P18 (HMM E-Value=4.9) 28 7.7
SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21) 28 7.7
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 28 7.7
SB_23599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 28 7.7
SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 28 7.7
SB_9383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 28 7.7
SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25) 28 7.7
SB_55213| Best HMM Match : Viral_P18 (HMM E-Value=2.6) 28 7.7
SB_52244| Best HMM Match : RVT_1 (HMM E-Value=9.5e-20) 28 7.7
SB_43560| Best HMM Match : DUF633 (HMM E-Value=4.4) 28 7.7
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 28 7.7
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -3
Query: 702 RLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 586
RLY ++ RR+++ ++ + Y + IRPV+ Y + VF HA
Sbjct: 469 RLYFIVSLRRARVPTKDIIDFYCSAIRPVLEYCAAVFHHA 508
>SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = -3
Query: 690 MICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFK 568
++ +R+++ + + + Y TC+RP++ Y + +F H + K
Sbjct: 625 VLLKRARVPVSDIIGFYNTCVRPILEYCAPLFHHTIPAYVK 665
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 681 RRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
+R+ + ++ + Y TCIRPV YA VF H
Sbjct: 1213 KRANIKVKELLLFYLTCIRPVTEYACPVFHH 1243
>SB_29819| Best HMM Match : Ribosomal_L39 (HMM E-Value=4.1)
Length = 300
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + ++ LY T +RP + YAS +++ +
Sbjct: 226 LSWGPHIEPMCAKANRVLG-LAKRVCS-DILDPTSRQLLYCTLVRPHLEYASCIWSRSTG 283
Query: 579 IHFKILSNYSI 547
H ++ SI
Sbjct: 284 KHKALIGTSSI 294
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 595 LSWGPHIEPMCAKANRVLG-LLKRVCS-DILDPTTRQLLYCTLVRPSLEYASCIWSPSTG 652
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 653 KHKALIEN 660
>SB_39284| Best HMM Match : WW (HMM E-Value=7.9)
Length = 251
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFKILSN 556
RLY + + ++ + +T+Y++ IR V+ YAS FA+ F L N
Sbjct: 109 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFANLPNYLFDALEN 158
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 98 LSWGPHIEPMCAKANRVLG-LLKRVCS-DILDPTTRQLLYCTLVRPSLEYASCIWSPSTG 155
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 156 KHKALIEN 163
>SB_56417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 50 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 107
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 108 KHKALIEN 115
>SB_34112| Best HMM Match : RVT_1 (HMM E-Value=0.041)
Length = 858
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 692 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 749
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 750 KHKALIEN 757
>SB_42738| Best HMM Match : 7tm_1 (HMM E-Value=0.89)
Length = 1354
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 843 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 900
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 901 KHKALIEN 908
>SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1868
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 1736 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 1793
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 1794 KHKALIEN 1801
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 98 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 155
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 156 KHKALIEN 163
>SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 519 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTLVRPHLEYASCIWSPSTG 576
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 577 KHKALIEN 584
>SB_54561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 759 MTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+++ PHI+ + +A +LG L +C + + LY T +RP + YAS +++ +
Sbjct: 103 LSWGPHIEPMCAKANRVLG-LVKRVCS-DILDPTTRQLLYCTFVRPHLEYASCIWSPSTG 160
Query: 579 IHFKILSN 556
H ++ N
Sbjct: 161 KHKALIEN 168
>SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6)
Length = 1130
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 702 RLYPMIC-RRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFK 568
RLY ++ +R+ + + + + Y TC+RP++ Y + + HA + K
Sbjct: 271 RLYFLVLLKRTIVPVSDIIGFYDTCVRPILEYCAPLSYHAIPAYLK 316
>SB_25871| Best HMM Match : SLH (HMM E-Value=1.1)
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S N + +Y++ +R + YASVVFA R
Sbjct: 7 RLYAIRQLKRCGVSTDNIIVVYRSLVRSTLEYASVVFADLPR 48
>SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17)
Length = 554
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S N + +Y++ +R + YASVVFA R
Sbjct: 389 RLYAIRQLKRCGVSTDNIIVVYRSLVRSTLEYASVVFADLPR 430
>SB_56531| Best HMM Match : SLH (HMM E-Value=1.1)
Length = 151
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S N + +Y++ +R + YASVVFA R
Sbjct: 7 RLYAIRQLKRCGVSTDNIIVVYRSLVRSTLKYASVVFADLPR 48
>SB_38574| Best HMM Match : WW (HMM E-Value=4.9)
Length = 256
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFKILSN 556
RLY + + ++ + +T+Y++ IR V+ YAS+ FA+ +L N
Sbjct: 114 RLYALRVLKKCGLDAIELITVYRSPIRSVIEYASIAFANLQNYLSDVLEN 163
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + + +T+Y++ IR V+ YAS FA+
Sbjct: 66 RLYALRVLKKCGLDAKELITVYRSLIRSVIEYASAAFAN 104
>SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS VFA+
Sbjct: 44 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAVFAN 82
>SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)
Length = 634
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 699 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 604
L P++C +S +SL + +Y +C+R + YAS
Sbjct: 474 LLPILCSKS-LSLHTRGRIYSSCVRGALLYAS 504
>SB_5462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 756 TFRPHIKTVRXRAAFILG--RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
T + H T++ R RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 175 TMQEHANTLKNRIIIKKANKRLYALRVLKKCGLDAIELITVYRSLIRSVIEYASATFAN 233
>SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031)
Length = 599
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 681 RRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+R +S N + +Y++ +R + YASVVFA R
Sbjct: 463 KRCGVSTDNIIVVYRSLVRSTLEYASVVFADLPR 496
>SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS VFA+
Sbjct: 44 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAVFAN 82
>SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 76 KAVTTMSKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 123
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 504 PDEPRGSDGYPAKTGLNNLKGF*SVCGPRERT 599
P P+G+ G P GL+ ++G+ GPR R+
Sbjct: 49 PPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRS 80
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 681 RRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
++ + + + VT+Y + IRP+ YASV+F++
Sbjct: 4157 KKCGVPVEDMVTVYCSLIRPITEYASVIFSN 4187
>SB_1670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFKILSN 556
RLY + + ++ + +T+Y++ IR V+ YAS FA+ + L N
Sbjct: 81 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFANLSNYLSDALEN 130
>SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 370
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 160 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 207
>SB_47925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA----SVVFAHAARI 577
+A+ GRL + R +S++ K+ +YK + P++ Y+ +V +HA ++
Sbjct: 73 KASTAFGRLRKKVWGRRGLSMKTKLKVYKAIVLPLLLYSCETWTVYSSHAKKL 125
>SB_42199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA----SVVFAHAARI 577
+A+ GRL + R +S++ K+ +YK + P++ Y+ +V +HA ++
Sbjct: 73 KASTAFGRLRKKVWGRRGLSMKTKLKVYKAIVLPLLLYSCETWTVYSSHAKKL 125
>SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 546 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 593
>SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06)
Length = 530
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 300 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 347
>SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42)
Length = 590
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 508 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 555
>SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_4872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 681 RRSKMSLRNKVTLYKTCIRPVMTYASVVF 595
+RS ++ V+ ++TC+RP+ YA V+
Sbjct: 276 KRSGLAKSGLVSFFRTCVRPITEYACPVY 304
>SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 180 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 227
>SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_58494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_54439| Best HMM Match : SNF (HMM E-Value=0)
Length = 701
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + I ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 640 RLYALRILKKCGLDAIELITVYRSLIRSVIEYASAAFAN 678
>SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43)
Length = 458
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 297 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 344
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 2388 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSEPWTTYAR 2435
>SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 328
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 590 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 637
>SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 290
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 129 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 176
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_27484| Best HMM Match : RVT_1 (HMM E-Value=0.035)
Length = 322
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 226 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 273
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 112 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSKSWTTYAR 159
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 186 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 233
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 129 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 176
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHFKILSN 556
RLY + + ++ + +T+Y++ IR V+ YAS FA+ L N
Sbjct: 963 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFANLPNYLSNALEN 1012
>SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 681 RRSKMSLRNKVTLYKTCIRPVMTYASVVF 595
+R+ + Y TCIRP+M YA VF
Sbjct: 331 KRASLGSEELHQFYLTCIRPIMEYACPVF 359
>SB_8964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILSTLLYGSESWTTYAR 124
>SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13)
Length = 679
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + ++S +S N + +Y + +RPV+ YAS V++
Sbjct: 537 RLYAIRALKKSGLSSNNLIQVYCSTMRPVLEYASPVWS 574
>SB_53893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 764
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S + + +Y++ +R + YASVVFA R
Sbjct: 615 RLYAIRQLKRCGVSTDDIIVVYRSLVRSTLEYASVVFADLPR 656
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 495 VDVPDEPRGSDGYPAKTGLNNLKGF*SVCGPR 590
+D+P P+G DG P + GL ++G + GP+
Sbjct: 141 IDIPG-PKGMDGPPGEKGLPGVQGDPGIKGPK 171
>SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015)
Length = 798
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S + + +Y++ +R + YASVVFA R
Sbjct: 731 RLYAIRQLKRCGVSTDDIIVVYRSLVRSTLEYASVVFADLPR 772
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ C+ + Y S + AR
Sbjct: 468 KAVTTMTKLSSRVWENKKLTISTKITVYRACVLSTLLYGSESWTTYAR 515
>SB_23846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 41 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 79
>SB_23375| Best HMM Match : PCI (HMM E-Value=9.5)
Length = 208
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + + +T+Y++ IR V+ YAS FA+
Sbjct: 66 RLYALRVLKKCGLDVIELITVYRSLIRSVIEYASEAFAN 104
>SB_8006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 81 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 119
>SB_7179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S + + +Y++ +R + YASVVFA R
Sbjct: 7 RLYAIRQLKRCGVSTDDIIVVYRSLVRSTLEYASVVFADLPR 48
>SB_7051| Best HMM Match : RVT_1 (HMM E-Value=0.064)
Length = 756
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 702 RLYPMI-CRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
RLY + +R +S + + +Y++ +R + YASVVFA R
Sbjct: 131 RLYAIRQLKRCGVSTDDIIVVYRSLVRSTLEYASVVFADLPR 172
>SB_6318| Best HMM Match : RVT_1 (HMM E-Value=0.72)
Length = 485
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 435 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 473
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 495 VDVPDEPRGSDGYPAKTGLNNLKGF*SVCGPR 590
+D+P P+G DG P + GL ++G + GP+
Sbjct: 141 IDIPG-PKGMDGPPGEKGLPGVQGDPGIKGPK 171
>SB_777| Best HMM Match : DUF1126 (HMM E-Value=5.1)
Length = 173
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 723 RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 580
+A + +L + K+++ K+T+Y+ CI + Y S + AR
Sbjct: 77 KAVTTMTKLSSRVWENKKLTISTKITVYRACILNTLLYGSESWTTYAR 124
>SB_51865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 181 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 219
>SB_37723| Best HMM Match : RVT_1 (HMM E-Value=0.054)
Length = 596
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 426 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 464
>SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1)
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 255 RLYALRVLKKCGLDAIELITVYRSLIRSVIEYASAAFAN 293
>SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08)
Length = 652
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 699 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
L P++ +S +SLR + +Y +C+R M YA +A
Sbjct: 549 LLPVLSSKS-LSLRTRGKVYSSCVRSAMLYAGECWA 583
>SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94)
Length = 310
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + ++S +S N + +Y + +RPV+ YAS V++
Sbjct: 168 RLYAIRALKKSGLSSNNLIQVYCSTMRPVLEYASPVWS 205
>SB_53921| Best HMM Match : Viral_P18 (HMM E-Value=2.6)
Length = 322
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 181 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 218
>SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 310 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 347
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 884 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 930
>SB_36270| Best HMM Match : Viral_P18 (HMM E-Value=4.9)
Length = 283
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 181 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 218
>SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21)
Length = 499
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 401 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 438
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 190 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 236
>SB_23599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 143 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 180
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 176 HVKSTSGKASKVMG----MIKRNFWNCHQRVKVTAYTAIVRPMLEYASAAW 222
>SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 890
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + ++ + + + VT+Y + IR V YASV+F++
Sbjct: 773 RLYALRTLKKCGVPVEDMVTVYCSLIRSVTEYASVIFSN 811
>SB_9383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH 589
RLY + + ++ + +T+Y++ IR V+ YAS FA+
Sbjct: 161 RLYALRVLKKCGLDAIELITVYRSFIRSVIEYASAAFAN 199
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 422 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 468
>SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 864
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 606 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 652
>SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25)
Length = 863
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 708 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 754
>SB_55213| Best HMM Match : Viral_P18 (HMM E-Value=2.6)
Length = 371
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 181 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 218
>SB_52244| Best HMM Match : RVT_1 (HMM E-Value=9.5e-20)
Length = 523
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 382 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 419
>SB_43560| Best HMM Match : DUF633 (HMM E-Value=4.4)
Length = 284
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 702 RLYPM-ICRRSKMSLRNKVTLYKTCIRPVMTYASVVFA 592
RLY + + +++ +S+ + T+Y IR V+ YAS V+A
Sbjct: 143 RLYALRLLKKAGLSVHDLCTIYCALIRSVLEYASPVWA 180
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 396 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 442
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 93 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 139
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 639 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 685
>SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 598 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 644
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 744 HIKTVRXRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTYASVVF 595
H+K+ +A+ ++G MI R R KVT Y +RP++ YAS +
Sbjct: 481 HVKSTSGKASKVMG----MIKRNFWNCPQRVKVTAYTAIVRPMLEYASAAW 527
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,081,331
Number of Sequences: 59808
Number of extensions: 433318
Number of successful extensions: 1407
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -