Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G12
(803 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 58 1e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 1e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 57 2e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 49 7e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 49 7e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 46 8e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 46 8e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 44 2e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 42 7e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 40 0.004
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 40 0.004
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 40 0.004
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 40 0.005
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.8
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 30 3.2
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 30 4.3
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 30 4.3
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 30 4.3
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 30 4.3
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 30 4.3
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 7.4
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 7.4
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A
Sbjct: 780 KLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCA 839
Query: 582 RIHFKIL 562
+ H K L
Sbjct: 840 QTHIKKL 846
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ A
Sbjct: 728 KLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCA 787
Query: 582 RIHFKIL 562
+ H K L
Sbjct: 788 QTHIKKL 794
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 57.2 bits (132), Expect = 2e-08
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+ D+ RH N L
Sbjct: 818 IKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLAS 877
Query: 392 AAGNYIPDPADRMESSRRRPKHVISDPP 309
A P R+ +RR+P+ +I+ P
Sbjct: 878 ALNR--SRPPRRL--NRRQPRDLITRSP 901
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y ++ A
Sbjct: 755 RLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLAC 814
Query: 582 RIHFK 568
H K
Sbjct: 815 DSHIK 819
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 49.2 bits (112), Expect = 7e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
Q QSR RI GAPW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 813 QRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 42.7 bits (96), Expect = 6e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A+
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 582 RIHFKIL 562
R + I+
Sbjct: 806 RSNIDII 812
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 49.2 bits (112), Expect = 7e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
Q QSR RI GAPW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 813 QRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
Score = 42.7 bits (96), Expect = 6e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A+
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 582 RIHFKIL 562
R + I+
Sbjct: 806 RSNIDII 812
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 45.6 bits (103), Expect = 8e-05
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
L +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ ++ H N L
Sbjct: 823 LNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLAR 882
Query: 392 AAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
G AD R RR +H D P+
Sbjct: 883 KLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y V+ AA
Sbjct: 760 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 819
Query: 582 RIH 574
+ H
Sbjct: 820 KSH 822
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 45.6 bits (103), Expect = 8e-05
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 572 LKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIV 393
L +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ ++ H N L
Sbjct: 625 LNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLAR 684
Query: 392 AAGNYIPDPAD-RMESSRRRPKHVISDPPD 306
G AD R RR +H D P+
Sbjct: 685 KLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y V+ AA
Sbjct: 562 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 621
Query: 582 RIH 574
+ H
Sbjct: 622 KSH 624
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+TF PH+K R + +L ++ R+S M+LR K +Y C+ P+ Y ++ AA
Sbjct: 761 RLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAA 820
Query: 582 RIHF---KILSNYSIPFLQD 532
+ ++ ++L N ++ + D
Sbjct: 821 KSNYNRIQVLQNRAMRAITD 840
Score = 41.9 bits (94), Expect = 0.001
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 399
Q++Q+R R P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 828 QVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 42.3 bits (95), Expect = 7e-04
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = -3
Query: 762 RMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAA 583
R+T+R HI+ + + L+ +I S +SL +KV LY + ++P+ TY S ++ +A+
Sbjct: 748 RLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNAS 807
Query: 582 RIHFKIL 562
+ I+
Sbjct: 808 NSNIDII 814
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 560 QIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 462
Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 815 QRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 569 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 396
K Q +++++ R + A + R D+ +++S + AS R+ + HENPLI
Sbjct: 883 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942
Query: 395 VAAGNYIPDPADRMESSRRR 336
+ Y P +R+E S+ R
Sbjct: 943 LLINAYKP---NRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 569 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 396
K Q +++++ R + A + R D+ +++S + AS R+ + HENPLI
Sbjct: 883 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942
Query: 395 VAAGNYIPDPADRMESSRRR 336
+ Y P +R+E S+ R
Sbjct: 943 LLINAYKP---NRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 569 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 396
K Q +++++ R + A + R D+ +++S + AS R+ + HENPLI
Sbjct: 883 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942
Query: 395 VAAGNYIPDPADRMESSRRR 336
+ Y P +R+E S+ R
Sbjct: 943 LLINAYKP---NRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = -1
Query: 569 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 396
K Q +++++ R + A + R D+ +++S + AS R+ + HENPLI
Sbjct: 436 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYD 495
Query: 395 VAAGNYIPDPADRMESSRRR 336
+ Y P +R+E S+ R
Sbjct: 496 LLINAYKP---NRLELSKNR 512
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 303
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 302 L 300
+
Sbjct: 105 M 105
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 504 PDEP--RGSDGYPAKTGLNNLKGF*SVCGPR 590
P EP +G GYP + G+N LKG GP+
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKGATGFPGPQ 1126
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 690 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 768 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 765 SRMTFRPHIKTVRXRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,752,568
Number of Sequences: 53049
Number of extensions: 645566
Number of successful extensions: 1644
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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