BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G10 (802 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 118 4e-27 03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 118 4e-27 12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902 29 3.3 06_03_0543 + 21967787-21970261 29 5.7 12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423 28 7.5 01_06_0533 + 30052538-30054004 28 9.9 >07_03_1272 - 25360180-25360286,25360454-25360658,25360748-25360945, 25361034-25361296,25361865-25362009 Length = 305 Score = 118 bits (285), Expect = 4e-27 Identities = 52/86 (60%), Positives = 65/86 (75%) Frame = -2 Query: 633 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 454 EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WL Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWL 181 Query: 453 LAREVLRLRGVLPRDQRWDVVVDLFF 376 LAR VL++RG + +WDV+VDLFF Sbjct: 182 LARMVLQMRGTILPGHKWDVMVDLFF 207 Score = 52.8 bits (121), Expect = 3e-07 Identities = 25/43 (58%), Positives = 31/43 (72%) Frame = -3 Query: 800 RAVVAIXNPADVXVXSSRPFGQRAVLKFAAHTRCYAYCGTFHT 672 R +VAI NP D+ V S+RP+GQRAVLKFA +T +A G HT Sbjct: 67 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR-HT 108 Score = 35.9 bits (79), Expect = 0.038 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -1 Query: 703 GATXIAGRFTPGAFTNQIQAAF 638 GA IAGR TPG FTNQ+Q +F Sbjct: 99 GAHAIAGRHTPGTFTNQLQTSF 120 >03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701, 4319791-4320053,4320453-4320597 Length = 305 Score = 118 bits (285), Expect = 4e-27 Identities = 52/86 (60%), Positives = 66/86 (76%) Frame = -2 Query: 633 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 454 EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++WL Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWL 181 Query: 453 LAREVLRLRGVLPRDQRWDVVVDLFF 376 LAR VL++RG + +WDV+VDLFF Sbjct: 182 LARMVLQMRGTILPGHKWDVMVDLFF 207 Score = 52.8 bits (121), Expect = 3e-07 Identities = 25/43 (58%), Positives = 31/43 (72%) Frame = -3 Query: 800 RAVVAIXNPADVXVXSSRPFGQRAVLKFAAHTRCYAYCGTFHT 672 R +VAI NP D+ V S+RP+GQRAVLKFA +T +A G HT Sbjct: 67 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR-HT 108 Score = 35.9 bits (79), Expect = 0.038 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -1 Query: 703 GATXIAGRFTPGAFTNQIQAAF 638 GA IAGR TPG FTNQ+Q +F Sbjct: 99 GAHAIAGRHTPGTFTNQLQTSF 120 >12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902 Length = 781 Score = 29.5 bits (63), Expect = 3.3 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -2 Query: 216 TRCSSCFWSTPCSRRMVCPGTR*VEHN 136 T C C P + VCPG+R V+ N Sbjct: 275 TECKKCLAGAPAGIKQVCPGSRTVKAN 301 Score = 27.9 bits (59), Expect = 9.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 216 TRCSSCFWSTPCSRRMVCPGTR 151 TRC C P R CPG+R Sbjct: 81 TRCKECLARAPAGVRQECPGSR 102 >06_03_0543 + 21967787-21970261 Length = 824 Score = 28.7 bits (61), Expect = 5.7 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -2 Query: 468 LMWWLLAREVLRLRGVLPRDQRWDVVVDLF 379 L W++L RE +LRGV P + ++++ + F Sbjct: 472 LGWFILRREAKQLRGVWPAEAGYEMIANHF 501 >12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423 Length = 427 Score = 28.3 bits (60), Expect = 7.5 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -2 Query: 216 TRCSSCFWSTPCSRRMVCPGTR*VEHN 136 T+C C P VCPG+R V N Sbjct: 93 TQCKECLAGAPAGITQVCPGSRTVNAN 119 >01_06_0533 + 30052538-30054004 Length = 488 Score = 27.9 bits (59), Expect = 9.9 Identities = 12/50 (24%), Positives = 25/50 (50%) Frame = -2 Query: 690 LRDVSHQVLLLTRSKLHSREPRLLIVLDPAQDHQPITEASYVNIPVIALC 541 L D+ L + H+ L+V+D A+D +P+ + ++ + A+C Sbjct: 229 LEDMGDHRALTVKHGSHASHGSSLVVVDLAEDEEPVGDGAWRRLRSSAMC 278 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,818,884 Number of Sequences: 37544 Number of extensions: 393800 Number of successful extensions: 995 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 995 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2174172540 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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