Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G09
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 31 0.80
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.4
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.4
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 3.2
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 3.2
03_01_0515 - 3864796-3865425 29 3.2
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.3
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 29 5.7
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 7.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 7.5
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.9
09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149 28 9.9
01_01_0987 + 7803281-7803910,7803989-7804510 28 9.9
01_01_0083 + 631196-631675 28 9.9
>06_03_1310 + 29238644-29240260
Length = 538
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGG 656
PP + G PP P PP G P G P + P GG
Sbjct: 445 PPTEHPGYVLPPLTPPPPTTTPPGHHAPVPGTPSSPPSSSWSPPQGG 491
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP G PP P PP GG P PP
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPV---GGTQPPPPPPP 311
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632
P PPPP G P P PP G PP G
Sbjct: 298 PPVGGTQPPPPPPPLANGPPRSIPPPPMTGGAMANFTPGAPPRPPMQG 345
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632
P PPPP K PP PP G P PP K G
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632
PPPP K PP P PP K P PP G
Sbjct: 314 PPPPPPKPAAAAPP--PPPPPKAAPPPPPPKGPPPPPPAKG 352
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
P PPPP K PP P PP G GPP GG P
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG--GKKGGPPPPPPKGGASRP 389
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXP---XXGPPXXKXXGG 635
P PPPP K PP P PP G P PP GG
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Frame = +3
Query: 510 PPPPXKKXGGGXPP----FXPXPP---XKXGGGXXXPXXGPP 614
PPPP ++ G G P + P PP + G G P GPP
Sbjct: 139 PPPPNREPGHGYHPAPAFYPPQPPPSHDEPGYGYRPPPVGPP 180
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXK 623
P PPPP K G PP P PP G P PP K
Sbjct: 592 PPAPKAAPPPPPPKSTGPGPP-RPPPPAMPGSSKTRP---PPPLK 632
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPPP PP P PP P PP
Sbjct: 73 PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPP 107
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPPP PP P PP P PP
Sbjct: 74 PPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 80 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 181
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = -1
Query: 635 PPXXFXXGGPXXGVXXXPPXFXGGXXXKRGXSPPXFFXXGGGXXXXXXGPXXXXGYXXXK 456
PP P G PP G +R PP GGG G G
Sbjct: 365 PPQNMPYSQPYGGYPQQPPPRGGMGWDQRQGPPPHASHHGGGYDYYKQGSQPYEGQPPNY 424
Query: 455 XXGPPSXQKKPPFXG 411
GP + P G
Sbjct: 425 PPGPGNYNSYGPSQG 439
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -1
Query: 239 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYLQLVDPRHVSSDSFGVYVKS*SL 60
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 59 ILHSF 45
+LHSF
Sbjct: 1408 LLHSF 1412
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPPP PP P PP GGG GPP
Sbjct: 8 PPPPPP------PPQHPPPPQAGGGGGGEFYRGPP 36
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP G P F P PP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPP 566
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPF---XPXPPXKXG--GGXXXPXXGPPXXKXXGG 635
PPPP G G PP P PP G GG P G GG
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGG 1232
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
P PPPP GG P PP GG P PP + GG P
Sbjct: 1102 PSIGAGAPPPPPPP--GGITGVPPPPPIGGLGGHQAP-PAPPLPEGIGGVPPP 1151
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP----XXGPPXXKXXGGF 638
PPPP GG P P P GG P GPP GF
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGF 1169
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP 599
PPPP + G PP P PP K GG P
Sbjct: 614 PPPPPRPPGA--PP-PPPPPGKPGGPPPPP 640
>09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149
Length = 331
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 584 PPXFXGGXXXKRGXSPPXFFXXGGG 510
PP + GG G PP ++ GGG
Sbjct: 272 PPAYRGGGGGGGGSRPPIYYNGGGG 296
>01_01_0987 + 7803281-7803910,7803989-7804510
Length = 383
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 534 GGGXPPFXPXPPXKXGGGXXXPXXG 608
GGG PP P P GG P G
Sbjct: 43 GGGRPPMLPRSPSTVSGGGGRPGKG 67
>01_01_0083 + 631196-631675
Length = 159
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PP + GGG P+ P GGG PP
Sbjct: 78 PPPQGGGGGYIPYYQPPAGGGGGGGGFNYPAPP 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,437,109
Number of Sequences: 37544
Number of extensions: 352136
Number of successful extensions: 1077
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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