Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G09
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.31
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.31
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.96
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 6.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP 599
PPPP GG PP P PP GG P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG P PP GG
Sbjct: 742 PPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP GG PP P PP GG P PP
Sbjct: 752 PPISGGPPPPPPPP--GGCPP--PPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGG 656
P PPPP G PP P PP GG GPP GG GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPP-PPPPP----GGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG PP GG
Sbjct: 726 PPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
P GG GGP P G PPP GG P PP GG K
Sbjct: 730 PPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFK 781
Query: 592 XTPXXGPP 615
P PP
Sbjct: 782 GGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP 599
PPPP GG PP P PP GG P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG P PP GG
Sbjct: 742 PPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP GG PP P PP GG P PP
Sbjct: 752 PPISGGPPPPPPPP--GGCPP--PPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGG 656
P PPPP G PP P PP GG GPP GG GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPP-PPPPP----GGLPPITGGPPPPPPPGGLPPISGG 757
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG PP GG
Sbjct: 726 PPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
P GG GGP P G PPP GG P PP GG K
Sbjct: 730 PPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFK 781
Query: 592 XTPXXGPP 615
P PP
Sbjct: 782 GGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP 599
PPPP GG PP P PP GG P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG P PP GG
Sbjct: 325 PPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP GG PP P PP GG P PP
Sbjct: 335 PPISGGPPPPPPPP--GGCPP--PPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGG 656
P PPPP G PP P PP GG GPP GG GG
Sbjct: 290 PPITGGPPPPPGLPPITGGPP-PPPPP----GGLPPITGGPPPPPPPGGLPPISGG 340
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFX--PXPPXKXGGGXXXPXXGPPXXKXXGG 635
PPPP GG PP P PP GG PP GG
Sbjct: 309 PPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
P GG GGP P G PPP GG P PP GG K
Sbjct: 313 PPPGGLPPITGGPPP-----PPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFK 364
Query: 592 XTPXXGPP 615
P PP
Sbjct: 365 GGPPPPPP 372
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 486 GPXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
GP PP P GG PPF P PP P G P
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP-XXKXXGGFFXP 647
P PPPP G G PP PP G G PP GG + P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +1
Query: 409 FPKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGX 588
FP F G P P GP PP GG P F PP
Sbjct: 304 FPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRP 363
Query: 589 KXTPXXGPP 615
P G P
Sbjct: 364 SSPPTDGGP 372
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 486 GPXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
GP PP P GG PPF P PP P G P
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP-XXKXXGGFFXP 647
P PPPP G G PP PP G G PP GG + P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +1
Query: 409 FPKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGX 588
FP F G P P GP PP GG P F PP
Sbjct: 304 FPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRP 363
Query: 589 KXTPXXGPP 615
P G P
Sbjct: 364 SSPPTDGGP 372
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXP 599
PPPP + G PP P PP GG P
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGG 587
P PPPP GGG P PP GG
Sbjct: 33 PQQCCCPPPPPPPPCGGGYEAPPPPPPPSYAGG 65
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP G G PP P PP
Sbjct: 235 PPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP G G PP P PP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP G G PP P PP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPP 240
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P P PP G PP P PP + G P PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPPP + GG PP P PP G PP
Sbjct: 336 PPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPP 368
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +3
Query: 510 PPPPXKKXG----GGXPPFXPXPPXKXG--GGXXXPXXGPPXXKXXGGFFXP 647
PPPP + G G PP P PP + G G P PP + GG P
Sbjct: 301 PPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXG----GGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
P PPPP + G GG PP P PP G P P G + P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPP--PPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 365
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP K GG P P PP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPP 144
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P P PP G PP P PP + G P PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPPP + GG PP P PP G PP
Sbjct: 346 PPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPP 378
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +3
Query: 510 PPPPXKKXG----GGXPPFXPXPPXKXG--GGXXXPXXGPPXXKXXGGFFXP 647
PPPP + G G PP P PP + G G P PP + GG P
Sbjct: 311 PPPPGRTPGPPGMPGMPP--PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXG----GGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
P PPPP + G GG PP P PP G P P G + P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPP--PPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 375
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +3
Query: 510 PPPPX--KKXGGGXPPFXPXPPXKXGGG 587
PPPP G G PP P PP GG
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +3
Query: 510 PPPPX--KKXGGGXPPFXPXPPXKXGGG 587
PPPP G G PP P PP GG
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXP 560
PPP + GGG PPF P
Sbjct: 798 PPPHFDRRGGGGPPFRP 814
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 584 PPXFXGGXXXKRGXSPPXFFXXGGG 510
PP F GG G PP F GGG
Sbjct: 784 PPSFRGGRGGHGGPPPPHFDRRGGG 808
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 513 PPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPP + PP PP GG P G P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP + G PP PP + GG G P
Sbjct: 291 PPRAGSPPPPPPPR---GSPPTGSLPPPQAGGSPPPAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 513 PPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPP + PP PP GG P G P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP + G PP PP + GG G P
Sbjct: 312 PPRAGSPPPPPPPR---GSPPTGSLPPPQAGGSPPPAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 513 PPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PPP + PP PP GG P G P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
P PPPP + G PP PP + GG G P
Sbjct: 297 PPRAGSPPPPPPPR---GSPPTGSLPPPQAGGSPPPAGTGSP 335
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PP GGG + P P + G G P PP
Sbjct: 797 PPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP-XXKXXGGFFXPXG 653
P PP P + G PP P P G P GPP + GF P G
Sbjct: 700 PPPTSVQPPQPQQPPQG--PPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPG 753
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 PPPPXKKXGGGXP--PFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXG 653
P PP + G P P P PP + G P PP K G P G
Sbjct: 116 PGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAG 165
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGG-GXXXPXX--GPPXXKXXGGFFXPXGG 656
PP P G P P PP K G G P G P K G P GG
Sbjct: 223 PPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGG 274
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPP 614
PP GGG + P P + G G P PP
Sbjct: 797 PPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPP 569
PPPP + G PPF P PP
Sbjct: 40 PPPPWHR-NRGPPPFGPPPP 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,888,186
Number of Sequences: 27780
Number of extensions: 245997
Number of successful extensions: 925
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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