BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G09 (797 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g15830.1 68414.m01900 expressed protein 40 0.001 At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family... 36 0.024 At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 35 0.054 At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 34 0.095 At1g61080.1 68414.m06877 proline-rich family protein 32 0.51 At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 31 0.67 At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 2.7 At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 2.7 At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 2.7 At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 2.7 At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 28 6.2 At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 8.3 >At1g15830.1 68414.m01900 expressed protein Length = 483 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP K+ GGG P PP K GGG G P K GG Sbjct: 139 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 178 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP K+ GGG P PP K GGG G P K GG Sbjct: 155 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 194 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP K+ GGG P PP K GGG G P K GG Sbjct: 171 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 210 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP K+ GGG P PP K GGG G P K GG Sbjct: 187 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 226 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP K+ GGG P PP K GGG G P K GG Sbjct: 203 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGG 242 Score = 37.5 bits (83), Expect = 0.010 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 PP + GGG P PP K GGG G P K GG Sbjct: 123 PPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGG 162 Score = 36.7 bits (81), Expect = 0.018 Identities = 18/46 (39%), Positives = 19/46 (41%) Frame = +3 Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXG 653 PP K+ GGG P P K GGG G P K GG G Sbjct: 219 PPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGG 264 Score = 34.7 bits (76), Expect = 0.072 Identities = 23/75 (30%), Positives = 25/75 (33%) Frame = +1 Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591 PK GG GG P G P K+ GG P+ PP K GG Sbjct: 141 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 195 Query: 592 XTPXXGPPXXKXXGG 636 G P K GG Sbjct: 196 EPVIPGAPPPKRGGG 210 Score = 34.7 bits (76), Expect = 0.072 Identities = 23/75 (30%), Positives = 25/75 (33%) Frame = +1 Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591 PK GG GG P G P K+ GG P+ PP K GG Sbjct: 157 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 211 Query: 592 XTPXXGPPXXKXXGG 636 G P K GG Sbjct: 212 EPVIPGAPPPKRGGG 226 Score = 34.7 bits (76), Expect = 0.072 Identities = 23/75 (30%), Positives = 25/75 (33%) Frame = +1 Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591 PK GG GG P G P K+ GG P+ PP K GG Sbjct: 173 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 227 Query: 592 XTPXXGPPXXKXXGG 636 G P K GG Sbjct: 228 EPVIPGAPLPKRGGG 242 Score = 33.5 bits (73), Expect = 0.17 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = +1 Query: 511 PPPXXKKXGGEXPLFXXXPPXKXGGXKXTPXXGPPXXKXXGG 636 PPP K+ GG P+ PP K GG G P K GG Sbjct: 139 PPP--KRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 178 Score = 32.3 bits (70), Expect = 0.38 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +3 Query: 513 PPPXKKXGGGXPPFXPX--PPXKXGGGXXXPXXGPPXXKXXGG 635 PPP + GGG P P PP + GGG PP + GG Sbjct: 123 PPPIR--GGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 163 Score = 31.9 bits (69), Expect = 0.51 Identities = 20/65 (30%), Positives = 21/65 (32%) Frame = +1 Query: 442 GGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXKXTPXXGPPXX 621 GG P G PP + GGE P PP K GG G P Sbjct: 99 GGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGE-PAIPGAPPPKRGGGGEPVIPGAPPP 157 Query: 622 KXXGG 636 K GG Sbjct: 158 KRGGG 162 Score = 31.5 bits (68), Expect = 0.67 Identities = 24/81 (29%), Positives = 27/81 (33%) Frame = +1 Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591 PK GG G P P G PP + GGE P+ P K GG Sbjct: 189 PKRGG----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGE-PVIPGAPLPKRGGGG 243 Query: 592 XTPXXGPPXXKXXGGFFXXRG 654 + G P K GG G Sbjct: 244 ESVVPGAPPPKRGGGVIVNGG 264 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +3 Query: 528 KXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 + GGG P PP GGG PP + GG Sbjct: 96 RGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGG 131 >At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 147 Score = 36.3 bits (80), Expect = 0.024 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = +3 Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647 P PPPP GGG + P PP GG P G GG++ P Sbjct: 46 PSSYSPPPPPPSSSGGGGSYYYSPPPPSSSGGVKYPPPYG---GDGYGGYYPP 95 >At1g59910.1 68414.m06749 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128 Length = 929 Score = 35.1 bits (77), Expect = 0.054 Identities = 19/45 (42%), Positives = 19/45 (42%) Frame = +3 Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXK 623 P PPPP K G PP P PP K G G P PP K Sbjct: 389 PPSAAAPPPPPPPKKGPAAPP-PPPPPGKKGAGPPPP---PPMSK 429 Score = 29.1 bits (62), Expect = 3.6 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXG 581 PPPP K G PP P P K G Sbjct: 423 PPPPMSKKGPPKPPGNPKGPTKSG 446 Score = 27.9 bits (59), Expect = 8.3 Identities = 18/49 (36%), Positives = 18/49 (36%) Frame = +3 Query: 486 GPXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632 GP PPPP PP P PP K G P PP K G Sbjct: 377 GPANQTSPPPPP--PPSAAAPP--PPPPPKKGPAAPPPPP-PPGKKGAG 420 >At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 162 Score = 34.3 bits (75), Expect = 0.095 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647 PPPP GG + PP + GGG P PP G++ P Sbjct: 66 PPPPSPPSSGGGSSYYYPPPSQSGGGSKYP---PPYGGGGQGYYYP 108 >At1g61080.1 68414.m06877 proline-rich family protein Length = 907 Score = 31.9 bits (69), Expect = 0.51 Identities = 15/46 (32%), Positives = 15/46 (32%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647 PPPP G P P PP G P PP G P Sbjct: 592 PPPPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMGMANGAAGP 637 Score = 31.1 bits (67), Expect = 0.89 Identities = 16/46 (34%), Positives = 16/46 (34%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647 PP P G G PP P PP G P PP G P Sbjct: 578 PPMPMGNSGSGGPP-PPPPPMPLANGATPPPPPPPMAMANGAAGPP 622 >At3g15000.1 68416.m01897 expressed protein similar to DAG protein (required for chloroplast differentiation and palisade development) GB:Q38732 [Antirrhinum majus] Length = 395 Score = 31.5 bits (68), Expect = 0.67 Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 5/54 (9%) Frame = +3 Query: 489 PXXXXXXPPPPXKKXGGGXPP-----FXPXPPXKXGGGXXXPXXGPPXXKXXGG 635 P PPPP PP + P PP GG P G P GG Sbjct: 255 PHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGG 308 >At5g19810.1 68418.m02354 proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 249 Score = 29.5 bits (63), Expect = 2.7 Identities = 17/55 (30%), Positives = 20/55 (36%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGGXXXFFF 674 PPPP K G PP P PP + PP K + P G +F Sbjct: 194 PPPPPYKYGRVYPP--PPPPPQAARSYKRSPPPPPPSKYGRVYSPPPPGKSWLWF 246 >At4g29990.1 68417.m04266 light repressible receptor protein kinase identical to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376 Length = 876 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = -1 Query: 251 YFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYLQLVD 114 + TP FD + N+ +V+ N+TA+++ I + PS I++ LVD Sbjct: 117 FSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163 >At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family protein Common family members: At4g18570, At4g04980, At5g61090 [Arabidopsis thaliana]; identical to cDNA CHUP1 for actin binding protein GI:28071264 Length = 1004 Score = 29.5 bits (63), Expect = 2.7 Identities = 17/41 (41%), Positives = 17/41 (41%) Frame = +3 Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGP 611 P PPPP GGG PP PP GGG P P Sbjct: 672 PPLPGGGPPPPPPPPGGGPPP----PP---GGGPPPPPPPP 705 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 537 GGXPPFXPXPPXKXGGGXXXPXXGPP 614 GG PP P PP GG P GPP Sbjct: 676 GGGPP--PPPPPPGGGPPPPPGGGPP 699 Score = 27.9 bits (59), Expect = 8.3 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +3 Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGG 587 P PPPP GGG PP P PP G G Sbjct: 683 PPPPGGGPPPPP---GGGPPP-PPPPPGALGRG 711 >At1g70140.1 68414.m08071 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 760 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/41 (39%), Positives = 16/41 (39%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632 PPPP KK G P P PP K G PP G Sbjct: 256 PPPPIKK--GSSPSPPPPPPVKKVGALSSSASKPPPAPVRG 294 >At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SP|P27048 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Mus musculus} Length = 254 Score = 28.3 bits (60), Expect = 6.2 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%) Frame = +3 Query: 510 PPPPXKKXGGGXPPF-----XPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXG 653 P PP GG PP+ P PP GG P PP G P G Sbjct: 163 PQPPFAGQGGPPPPYGMRPPYPGPPPPQYGGQQRPMMIPPPGGMMRGPPPPHG 215 >At5g11990.1 68418.m01402 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 181 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = +3 Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGG 584 PPPP G G PP P P G Sbjct: 108 PPPPLSPDGKGSPPSVPSSPPSPKG 132 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,288,807 Number of Sequences: 28952 Number of extensions: 251553 Number of successful extensions: 877 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 736 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1804564000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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