Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G09
(797 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g15830.1 68414.m01900 expressed protein 40 0.001
At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family... 36 0.024
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 35 0.054
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 34 0.095
At1g61080.1 68414.m06877 proline-rich family protein 32 0.51
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 31 0.67
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 2.7
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 2.7
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 2.7
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 2.7
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 28 6.2
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 8.3
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP K+ GGG P PP K GGG G P K GG
Sbjct: 139 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 178
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP K+ GGG P PP K GGG G P K GG
Sbjct: 155 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP K+ GGG P PP K GGG G P K GG
Sbjct: 171 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 210
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP K+ GGG P PP K GGG G P K GG
Sbjct: 187 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP K+ GGG P PP K GGG G P K GG
Sbjct: 203 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGG 242
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
PP + GGG P PP K GGG G P K GG
Sbjct: 123 PPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGG 162
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 516 PPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXG 653
PP K+ GGG P P K GGG G P K GG G
Sbjct: 219 PPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGG 264
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
PK GG GG P G P K+ GG P+ PP K GG
Sbjct: 141 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 195
Query: 592 XTPXXGPPXXKXXGG 636
G P K GG
Sbjct: 196 EPVIPGAPPPKRGGG 210
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
PK GG GG P G P K+ GG P+ PP K GG
Sbjct: 157 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 211
Query: 592 XTPXXGPPXXKXXGG 636
G P K GG
Sbjct: 212 EPVIPGAPPPKRGGG 226
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
PK GG GG P G P K+ GG P+ PP K GG
Sbjct: 173 PKRGG-----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 227
Query: 592 XTPXXGPPXXKXXGG 636
G P K GG
Sbjct: 228 EPVIPGAPLPKRGGG 242
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 511 PPPXXKKXGGEXPLFXXXPPXKXGGXKXTPXXGPPXXKXXGG 636
PPP K+ GG P+ PP K GG G P K GG
Sbjct: 139 PPP--KRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGG 178
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 513 PPPXKKXGGGXPPFXPX--PPXKXGGGXXXPXXGPPXXKXXGG 635
PPP + GGG P P PP + GGG PP + GG
Sbjct: 123 PPPIR--GGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGG 163
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 442 GGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXKXTPXXGPPXX 621
GG P G PP + GGE P PP K GG G P
Sbjct: 99 GGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGE-PAIPGAPPPKRGGGGEPVIPGAPPP 157
Query: 622 KXXGG 636
K GG
Sbjct: 158 KRGGG 162
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/81 (29%), Positives = 27/81 (33%)
Frame = +1
Query: 412 PKXGGFFWXEGGPXXXXXKXPXXXXGPXXXXXXPPPXXKKXGGEXPLFXXXPPXKXGGXK 591
PK GG G P P G PP + GGE P+ P K GG
Sbjct: 189 PKRGG----GGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGE-PVIPGAPLPKRGGGG 243
Query: 592 XTPXXGPPXXKXXGGFFXXRG 654
+ G P K GG G
Sbjct: 244 ESVVPGAPPPKRGGGVIVNGG 264
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 528 KXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
+ GGG P PP GGG PP + GG
Sbjct: 96 RGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGG 131
>At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 147
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
P PPPP GGG + P PP GG P G GG++ P
Sbjct: 46 PSSYSPPPPPPSSSGGGGSYYYSPPPPSSSGGVKYPPPYG---GDGYGGYYPP 95
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXK 623
P PPPP K G PP P PP K G G P PP K
Sbjct: 389 PPSAAAPPPPPPPKKGPAAPP-PPPPPGKKGAGPPPP---PPMSK 429
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXG 581
PPPP K G PP P P K G
Sbjct: 423 PPPPMSKKGPPKPPGNPKGPTKSG 446
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 486 GPXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632
GP PPPP PP P PP K G P PP K G
Sbjct: 377 GPANQTSPPPPP--PPSAAAPP--PPPPPKKGPAAPPPPP-PPGKKGAG 420
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 34.3 bits (75), Expect = 0.095
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
PPPP GG + PP + GGG P PP G++ P
Sbjct: 66 PPPPSPPSSGGGSSYYYPPPSQSGGGSKYP---PPYGGGGQGYYYP 108
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
PPPP G P P PP G P PP G P
Sbjct: 592 PPPPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMGMANGAAGP 637
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXP 647
PP P G G PP P PP G P PP G P
Sbjct: 578 PPMPMGNSGSGGPP-PPPPPMPLANGATPPPPPPPMAMANGAAGPP 622
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPP-----FXPXPPXKXGGGXXXPXXGPPXXKXXGG 635
P PPPP PP + P PP GG P G P GG
Sbjct: 255 PHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGG 308
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXGGXXXFFF 674
PPPP K G PP P PP + PP K + P G +F
Sbjct: 194 PPPPPYKYGRVYPP--PPPPPQAARSYKRSPPPPPPSKYGRVYSPPPPGKSWLWF 246
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 251 YFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYLQLVD 114
+ TP FD + N+ +V+ N+TA+++ I + PS I++ LVD
Sbjct: 117 FSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGP 611
P PPPP GGG PP PP GGG P P
Sbjct: 672 PPLPGGGPPPPPPPPGGGPPP----PP---GGGPPPPPPPP 705
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 537 GGXPPFXPXPPXKXGGGXXXPXXGPP 614
GG PP P PP GG P GPP
Sbjct: 676 GGGPP--PPPPPPGGGPPPPPGGGPP 699
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 489 PXXXXXXPPPPXKKXGGGXPPFXPXPPXKXGGG 587
P PPPP GGG PP P PP G G
Sbjct: 683 PPPPGGGPPPPP---GGGPPP-PPPPPGALGRG 711
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGGGXXXPXXGPPXXKXXG 632
PPPP KK G P P PP K G PP G
Sbjct: 256 PPPPIKK--GSSPSPPPPPPVKKVGALSSSASKPPPAPVRG 294
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPF-----XPXPPXKXGGGXXXPXXGPPXXKXXGGFFXPXG 653
P PP GG PP+ P PP GG P PP G P G
Sbjct: 163 PQPPFAGQGGPPPPYGMRPPYPGPPPPQYGGQQRPMMIPPPGGMMRGPPPPHG 215
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 510 PPPPXKKXGGGXPPFXPXPPXKXGG 584
PPPP G G PP P P G
Sbjct: 108 PPPPLSPDGKGSPPSVPSSPPSPKG 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,288,807
Number of Sequences: 28952
Number of extensions: 251553
Number of successful extensions: 877
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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