Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G04
(798 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_52209| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 30 1.9
SB_21785| Best HMM Match : DIX (HMM E-Value=4.4) 30 1.9
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_57266| Best HMM Match : POPLD (HMM E-Value=0.55) 29 3.3
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 29 4.4
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 29 4.4
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 29 4.4
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078) 29 5.8
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 29 5.8
SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 PSPPPISHRRLRLEKGARSTCPAERLPTKP--HRAPPLRLHETHGYRTVRAEGSPSPVPI 302
P P +H R+ E R P R+P P++ ++ GYR V+ GS PVP
Sbjct: 514 PESVPGTHHRVPAEATGRVDVPDNRVPVNSAGDSISPIKC-DSEGYRGVKFSGSLDPVP- 571
Query: 303 LLIGRHSIP 329
+ H IP
Sbjct: 572 -MENDHRIP 579
>SB_52209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 165 LEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPS 290
LE+ + PA + P RAPP+ LH + + GSPS
Sbjct: 18 LEEQLKEQAPASQTPPHQGRAPPVALHPSSECQYRETGGSPS 59
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +3
Query: 111 EEKSRGPSPPPISHRRLRLEKGARSTCPAE-RLPTKP-HRAPPLRLHETHGYRTVRAEGS 284
+EK+ P P S R RL++ +++ P + P KP R P+ + E+ + G
Sbjct: 278 DEKTEAPHPRERSFSRTRLDRSMKNSKPDKPATPDKPDKRVKPVSMPES------KPAGP 331
Query: 285 PSPVPILLIGRHSIPGKIPQDVVSETHRERCTGATLRRLTTGPTAEYRAPPXPGT 449
P ++L R S GK P V + + AT P ++ P P T
Sbjct: 332 KKPDKLILPDRSSPTGK-PSRVPTPSKATPSKRATTPNNKGKPNSKPSTPNQPPT 385
>SB_21785| Best HMM Match : DIX (HMM E-Value=4.4)
Length = 480
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 573 DQVAKPGHGLPRILVL*HAGDDSPQGEVSPQHRDEVSPRALQRG 704
D + P H +L++ + +P G+ P R + +P A QRG
Sbjct: 397 DDMPPPPHSRKDVLIIRRGHEHAPNGQNRPSLRQKTTPPAPQRG 440
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 272 RRRLAVAGTHPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTN-SRVPG-TPXTR 445
RRR H +R+ R +P RR +P RS PHHR++ SR +P R
Sbjct: 210 RRRSHSPAHHRRSRSRSRSR-SPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRR 268
Query: 446 HPTAPTGDERELRARAAHS 502
H + + R R+R +HS
Sbjct: 269 HSRSRSPTHRRHRSR-SHS 286
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 383 PPGATHPRVPSPGASHPRVPPPGAPHPR 410
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 322 PSPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPYGR 468
P PG PP A P P HPR P P +P+ R
Sbjct: 402 PPPGAPHPRVPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPR 450
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 543 PPGAPHPRVPPPGASHPRVPPPGAPHPR 570
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A+ P P HPR P P +P+ R
Sbjct: 553 PPGASHPRVPPPGAPHPRVPPPGAPHPR 580
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPY 462
PP A P P T HPR P P +P+
Sbjct: 573 PPGAPHPRVPPPGTPHPRVPPPGAPH 598
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 283 RRRRYPSC**DGTPSPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPY 462
+R R P P PG PP A P P HPR P P +P+
Sbjct: 419 QRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPH 478
Query: 463 GR 468
R
Sbjct: 479 PR 480
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 463 PPGAPHPRVPPPGAPHPRVPPPGAPHPR 490
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 473 PPGAPHPRVPPPGAPHPRVPPPGAPHQR 500
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 503 PPGAPHPRVPPPGAPHPRVPPPGAPHPR 530
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 513 PPGAPHPRVPPPGAPHPRVPPPGAPHPR 540
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 523 PPGAPHPRVPPPGAPHPRVPPPGAPHPR 550
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP A P P HPR P P +P+ R
Sbjct: 563 PPGAPHPRVPPPGAPHPRVPPPGTPHPR 590
>SB_57266| Best HMM Match : POPLD (HMM E-Value=0.55)
Length = 558
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 678 PHRGAGERPLL-AGCHRPHARG 616
PH GAG+RP AGCHR H+ G
Sbjct: 41 PHPGAGKRPCSDAGCHR-HSMG 61
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 117 KSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHET 251
K +GP P+ L ++GAR + R PT P L + +T
Sbjct: 1432 KHKGPKSDPVKSTTLSEDEGARPLDDSNRTPTSPAAPKTLWMDQT 1476
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +3
Query: 135 PPPISHRRLR----LEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVP 299
PP + RR+ E+ + PAER + P R PP LH R P P+P
Sbjct: 1555 PPDPAERRVSPPFPAERRTPTPVPAERRVSPPSRLPPPSLHIRPSDRPGMTATPPPPLP 1613
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Frame = +2
Query: 272 RRRLAVAGTHPVNRTALHPRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTR-- 445
+RR + + +R H R RR G PP HR SR P +R
Sbjct: 30 KRRYSSSDDDDDDRKRGHSRGRRDDRRGGKRRSFSRSKSRTPPRHRRRSRSPNKKHSRSK 89
Query: 446 ------HPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAP 553
H RE R S++ + P+ P+P R P
Sbjct: 90 SRTPPRHRRRSRSPRRESIDRKRRSSYESPSPQPFPSPVRKP 131
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 791 YLGXLQEXPHPGXTXAGSGR*RSACTRS-VPALERSRRDLIAVLGRDLSLRAVIARMLED 615
+ G PH G GR T+S VPA RRD I + + + IAR LED
Sbjct: 765 HAGAYNGVPHEMTYMEGIGR--GVFTKSGVPAKSGERRDSIGNTAKSIGAKERIARSLED 822
Query: 614 QNSWE 600
+W+
Sbjct: 823 --TWQ 825
>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
Length = 788
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 127 VLHLPQFLTG---DYALKKAREALAPQNDYRLNPIEPHHSDSTKPT 255
+ +P FL+ DY LKKA++A +D L+PI + + T
Sbjct: 412 IFEIPNFLSDEECDYILKKAKKAGMHSSDIHLDPITDKYKKMIRST 457
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 382 EPPCAASPPDQQPSTGHPRHPAPDSP 459
+P C PD QP T P PD+P
Sbjct: 693 DPDCTTETPDTQPPTQPPVTQPPDTP 718
>SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -1
Query: 678 PHRGAGERPLL-AGCHR 631
PH GAG+RP AGCHR
Sbjct: 39 PHPGAGKRPCSDAGCHR 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,863,271
Number of Sequences: 59808
Number of extensions: 648715
Number of successful extensions: 2545
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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