Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G04
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 30 1.7
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 30 1.7
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.7
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.9
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 2.9
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 2.9
Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.9
Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha pro... 29 3.9
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 3.9
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 3.9
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in ge... 28 6.7
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 6.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 8.9
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 316 GTPS-PGKXXXXXXXXXXXXGAQEPPCAASPPDQQPS-TGHPRHPAPDSPYG 465
G P PGK GA P A +PP QP G P P PD P G
Sbjct: 119 GKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAG 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +2
Query: 395 PPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP* 574
PP + PG P P P G + E + AA S P P GTP
Sbjct: 150 PPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPG 209
Query: 575 P-GRKTWSWXPKNSGPLACGR*QPA 646
P G S P+ +GP G PA
Sbjct: 210 PDGPAGESTYPEPAGPGPAGPPGPA 234
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 391 CAASPPDQQPSTGHPRHPAPDSPYG 465
C A PP G P HP PD +G
Sbjct: 149 CPAGPPGPPGPNGFPGHPGPDGDFG 173
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 410 TNSRVPGTPXTRH-PTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGT-P*PGR 583
T+S P TP T P +G E + + H+ + + TP A P+G+ P PG
Sbjct: 193 TSSDTPKTPLTASSPPHSSGSESRVMSPITHTNI-SDELSISTTPTVAFTPNGSIPSPGT 251
Query: 584 KTWSWXPKNSGPLAC 628
+SW + G LAC
Sbjct: 252 G-YSWSIRREGKLAC 265
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 410 TNSRVPGTPXTRH-PTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGT-P*PGR 583
T+S P TP T P +G E + + H+ + + TP A P+G+ P PG
Sbjct: 193 TSSDTPKTPLTASSPPHSSGSESRVMSPITHTNI-SDELSISTTPTVAFTPNGSIPSPGT 251
Query: 584 KTWSWXPKNSGPLAC 628
+SW + G LAC
Sbjct: 252 G-YSWSIRREGKLAC 265
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +2
Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXT----RHPTAPTGDERELRARA 493
P+ + G + G P A + PP + + P P +H A +
Sbjct: 1208 PQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASS 1267
Query: 494 AHSAFFAVKPKRDPTPFRAPQP-HGTP*PGRKTWSWXPKNSGP 619
H A + + PTP AP P H TP + W+ P+ P
Sbjct: 1268 HHEHIAAPQARFTPTP-GAPSPWHATPAELKTPWNTTPQYHAP 1309
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +2
Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXT----RHPTAPTGDERELRARA 493
P+ + G + G P A + PP + + P P +H A +
Sbjct: 1228 PQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASS 1287
Query: 494 AHSAFFAVKPKRDPTPFRAPQP-HGTP*PGRKTWSWXPKNSGP 619
H A + + PTP AP P H TP + W+ P+ P
Sbjct: 1288 HHEHIAAPQARFTPTP-GAPSPWHATPAELKTPWNTTPQYHAP 1329
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/83 (24%), Positives = 27/83 (32%)
Frame = +1
Query: 217 PIEPHHSDSTKPTXTAQCAPKARRRRYPSC**DGTPSPGKXXXXXXXXXXXXGAQEPPCA 396
P H ++T P + P +R +P G P AQ C
Sbjct: 319 PTSDGHIEATTPYNPSAQYPTGKRGSHPGF---GPQRPRPGTRPRGNPCDQCSAQPNHCP 375
Query: 397 ASPPDQQPSTGHPRHPAPDSPYG 465
+ PP + G P P D P G
Sbjct: 376 SGPPGPRGRPGPPGFPGQDGPRG 398
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 DGTP-SPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPYG 465
DG P SPG G + PP A P Q TG +P P G
Sbjct: 243 DGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQG 294
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Frame = +2
Query: 380 RSHLAPPHHRTNSRVPGTPXTRHPT--APTGDERELRARAAHSAFFAVKPKRDPTPFRAP 553
R H HH ++ P T T APT + + ++ + PT P
Sbjct: 24 RGHHHHHHHHHKTKAPRTSRGIATTTFAPTSSDLPIAGSSSAPVIASSADPILPTSV-VP 82
Query: 554 QPHGTP*PGRKTWSWXPKNSGPLACGR*QPA 646
QP P PG S P SGP + G P+
Sbjct: 83 QPSNEPSPGTVAPSDEPSPSGPPSPGPVNPS 113
>U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical
protein F47B7.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 132 SPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLI 311
+PPP R + A T + RLP+ A R H H Y++ + G P+P + +
Sbjct: 100 TPPPPPERSYHADHYAVDTYDS-RLPSTSQLAAS-RDHMPHDYQSSNSMGYPTPSILQVG 157
Query: 312 GRHSIPGKIPQDVVS 356
G + ++ +D+VS
Sbjct: 158 GMQVMLQRLTKDMVS 172
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 DGTP-SPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPYG 465
DG P SPG G + PP A P Q TG +P P G
Sbjct: 243 DGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQG 294
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 382 EPPCAASPPDQQPSTGHPRHPAPDS 456
EP ++ PP QQPST P P S
Sbjct: 433 EPSSSSLPPPQQPSTSSTTEPVPPS 457
>Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical
protein ZK550.4 protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 695 ERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEXMTRFCDLV 573
E DLI V GR L L + RM+E++ S +C +V
Sbjct: 378 ESEEEDLIHVAGRALPLSQITPRMVENEMSELEKESYCSVV 418
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 316 GTPS-PGKXXXXXXXXXXXXGAQEPPCAASPPDQQP-STGHPRHPAPDSPYG 465
G P PGK GA P A +PP +P G P P PD P G
Sbjct: 118 GKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAG 169
>Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha
protein protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 695 ERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEXMTRFCDLV 573
E DLI V GR L L + RM+E++ S +C +V
Sbjct: 378 ESEEEDLIHVAGRALPLSQITPRMVENEMSELEKESYCSVV 418
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAP 450
PP +++PP Q P HP+ P P
Sbjct: 337 PPLSSAPPFQHPQQHHPQLPPP 358
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 391 CAASPPDQQPSTGHPRHPAPDSPYG 465
C A PP ++ S G+P P PD G
Sbjct: 95 CPAGPPGEKGSLGNPGQPGPDGVDG 119
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 455 APTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP*P 577
AP E +L+A S P R P+P R P P P P
Sbjct: 862 APRQTETQLKAPPPPSVARQPSPVRQPSPIREPSPIREPEP 902
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYG 465
PPC A PP + G P P + P G
Sbjct: 144 PPCPACPPGPPGAPGAPGKPGSEGPPG 170
>Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical
protein C05D12.7 protein.
Length = 71
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 359 DTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPT 463
D A+ HLAPP+ +S P P HP + T
Sbjct: 21 DAELAIRHGHLAPPNSIPDSPRPQKPTNDHPLSNT 55
>U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform b protein.
Length = 603
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 254
E S GPS SH R+ ST P + PT PH APP+ H
Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 254
E S GPS SH R+ ST P + PT PH APP+ H
Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 110 SPSSSQEAPESDITRSVTPLDRVSVNGFPSVKK 12
SP+SS APE T + + D V +G PS K
Sbjct: 1293 SPTSSATAPEVPTTSASSTPDAVEESGIPSTSK 1325
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Frame = +1
Query: 163 ALKKAREALAPQNDY---RLNPIE---PHH-SDSTKPTXTAQCAPKARRRR 294
A + R +L P D RL+P++ PHH S+STK + T+ +PK R ++
Sbjct: 175 AARLKRLSLTPYPDPQLPRLSPLQQQQPHHRSNSTKKSVTSSVSPKPRTQQ 225
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Frame = +2
Query: 272 RRRLAVAGTHPVNRTALHP---RENPAGRRLGDTP*-AVHRSHLAP-PHHRTNSRVPGTP 436
RRR P + + P R +P+ + P A RS P P R + +P
Sbjct: 390 RRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSP 449
Query: 437 XTRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP 571
R +P+ + R R + S + P+R +P AP+ +P
Sbjct: 450 APRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSP 494
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 627 AGDDSPQGEVSPQHRDEVSPR 689
+G +PQ EVSP + E SPR
Sbjct: 86 SGTTTPQSEVSPSKQSEASPR 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,861,980
Number of Sequences: 27780
Number of extensions: 457015
Number of successful extensions: 1862
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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