BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G04 (798 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.72 Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 31 1.3 Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 30 1.7 U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 30 1.7 EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.7 AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.7 Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 2.2 Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 2.9 U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.9 U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.9 M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 2.9 AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 2.9 Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical pr... 29 3.9 Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.9 Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha pro... 29 3.9 U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 3.9 AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 3.9 Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 6.7 Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 6.7 Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical pr... 28 6.7 U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in ge... 28 6.7 U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 6.7 U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.7 AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 28 6.7 Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.9 U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 8.9 >Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein H06A10.2 protein. Length = 305 Score = 31.5 bits (68), Expect = 0.72 Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +1 Query: 316 GTPS-PGKXXXXXXXXXXXXGAQEPPCAASPPDQQPS-TGHPRHPAPDSPYG 465 G P PGK GA P A +PP QP G P P PD P G Sbjct: 119 GKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAG 170 Score = 28.7 bits (61), Expect = 5.1 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Frame = +2 Query: 395 PPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP* 574 PP + PG P P P G + E + AA S P P GTP Sbjct: 150 PPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPG 209 Query: 575 P-GRKTWSWXPKNSGPLACGR*QPA 646 P G S P+ +GP G PA Sbjct: 210 PDGPAGESTYPEPAGPGPAGPPGPA 234 >Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical protein ZK265.2 protein. Length = 381 Score = 30.7 bits (66), Expect = 1.3 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = +1 Query: 391 CAASPPDQQPSTGHPRHPAPDSPYG 465 C A PP G P HP PD +G Sbjct: 149 CPAGPPGPPGPNGFPGHPGPDGDFG 173 >Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical protein F52F12.6 protein. Length = 539 Score = 30.3 bits (65), Expect = 1.7 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +2 Query: 410 TNSRVPGTPXTRH-PTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGT-P*PGR 583 T+S P TP T P +G E + + H+ + + TP A P+G+ P PG Sbjct: 193 TSSDTPKTPLTASSPPHSSGSESRVMSPITHTNI-SDELSISTTPTVAFTPNGSIPSPGT 251 Query: 584 KTWSWXPKNSGPLAC 628 +SW + G LAC Sbjct: 252 G-YSWSIRREGKLAC 265 >U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc finger proteinC.e-MyT1 protein. Length = 539 Score = 30.3 bits (65), Expect = 1.7 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +2 Query: 410 TNSRVPGTPXTRH-PTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGT-P*PGR 583 T+S P TP T P +G E + + H+ + + TP A P+G+ P PG Sbjct: 193 TSSDTPKTPLTASSPPHSSGSESRVMSPITHTNI-SDELSISTTPTVAFTPNGSIPSPGT 251 Query: 584 KTWSWXPKNSGPLAC 628 +SW + G LAC Sbjct: 252 G-YSWSIRREGKLAC 265 >EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1 protein. Length = 1492 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Frame = +2 Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXT----RHPTAPTGDERELRARA 493 P+ + G + G P A + PP + + P P +H A + Sbjct: 1208 PQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASS 1267 Query: 494 AHSAFFAVKPKRDPTPFRAPQP-HGTP*PGRKTWSWXPKNSGP 619 H A + + PTP AP P H TP + W+ P+ P Sbjct: 1268 HHEHIAAPQARFTPTP-GAPSPWHATPAELKTPWNTTPQYHAP 1309 >AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical protein Y53H1C.2a protein. Length = 1512 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Frame = +2 Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXT----RHPTAPTGDERELRARA 493 P+ + G + G P A + PP + + P P +H A + Sbjct: 1228 PQNSAPGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASS 1287 Query: 494 AHSAFFAVKPKRDPTPFRAPQP-HGTP*PGRKTWSWXPKNSGP 619 H A + + PTP AP P H TP + W+ P+ P Sbjct: 1288 HHEHIAAPQARFTPTP-GAPSPWHATPAELKTPWNTTPQYHAP 1329 >Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical protein C09G5.6 protein. Length = 948 Score = 29.9 bits (64), Expect = 2.2 Identities = 20/83 (24%), Positives = 27/83 (32%) Frame = +1 Query: 217 PIEPHHSDSTKPTXTAQCAPKARRRRYPSC**DGTPSPGKXXXXXXXXXXXXGAQEPPCA 396 P H ++T P + P +R +P G P AQ C Sbjct: 319 PTSDGHIEATTPYNPSAQYPTGKRGSHPGF---GPQRPRPGTRPRGNPCDQCSAQPNHCP 375 Query: 397 ASPPDQQPSTGHPRHPAPDSPYG 465 + PP + G P P D P G Sbjct: 376 SGPPGPRGRPGPPGFPGQDGPRG 398 >Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical protein T01B7.7 protein. Length = 348 Score = 29.5 bits (63), Expect = 2.9 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +1 Query: 313 DGTP-SPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPYG 465 DG P SPG G + PP A P Q TG +P P G Sbjct: 243 DGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQG 294 >U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein C50F7.5 protein. Length = 309 Score = 29.5 bits (63), Expect = 2.9 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 2/91 (2%) Frame = +2 Query: 380 RSHLAPPHHRTNSRVPGTPXTRHPT--APTGDERELRARAAHSAFFAVKPKRDPTPFRAP 553 R H HH ++ P T T APT + + ++ + PT P Sbjct: 24 RGHHHHHHHHHKTKAPRTSRGIATTTFAPTSSDLPIAGSSSAPVIASSADPILPTSV-VP 82 Query: 554 QPHGTP*PGRKTWSWXPKNSGPLACGR*QPA 646 QP P PG S P SGP + G P+ Sbjct: 83 QPSNEPSPGTVAPSDEPSPSGPPSPGPVNPS 113 >U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical protein F47B7.6 protein. Length = 215 Score = 29.5 bits (63), Expect = 2.9 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +3 Query: 132 SPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLI 311 +PPP R + A T + RLP+ A R H H Y++ + G P+P + + Sbjct: 100 TPPPPPERSYHADHYAVDTYDS-RLPSTSQLAAS-RDHMPHDYQSSNSMGYPTPSILQVG 157 Query: 312 GRHSIPGKIPQDVVS 356 G + ++ +D+VS Sbjct: 158 GMQVMLQRLTKDMVS 172 >M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.elegans collagen (rol-6) gene, complete cds. ). Length = 348 Score = 29.5 bits (63), Expect = 2.9 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +1 Query: 313 DGTP-SPGKXXXXXXXXXXXXGAQEPPCAASPPDQQPSTGHPRHPAPDSPYG 465 DG P SPG G + PP A P Q TG +P P G Sbjct: 243 DGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQG 294 >AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical protein Y50D7A.8 protein. Length = 569 Score = 29.5 bits (63), Expect = 2.9 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 382 EPPCAASPPDQQPSTGHPRHPAPDS 456 EP ++ PP QQPST P P S Sbjct: 433 EPSSSSLPPPQQPSTSSTTEPVPPS 457 >Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical protein ZK550.4 protein. Length = 433 Score = 29.1 bits (62), Expect = 3.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 695 ERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEXMTRFCDLV 573 E DLI V GR L L + RM+E++ S +C +V Sbjct: 378 ESEEEDLIHVAGRALPLSQITPRMVENEMSELEKESYCSVV 418 >Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein F54B11.2 protein. Length = 304 Score = 29.1 bits (62), Expect = 3.9 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +1 Query: 316 GTPS-PGKXXXXXXXXXXXXGAQEPPCAASPPDQQP-STGHPRHPAPDSPYG 465 G P PGK GA P A +PP +P G P P PD P G Sbjct: 118 GKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAG 169 >Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha protein protein. Length = 433 Score = 29.1 bits (62), Expect = 3.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 695 ERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEXMTRFCDLV 573 E DLI V GR L L + RM+E++ S +C +V Sbjct: 378 ESEEEDLIHVAGRALPLSQITPRMVENEMSELEKESYCSVV 418 >U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical protein R144.2a protein. Length = 823 Score = 29.1 bits (62), Expect = 3.9 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHPRHPAP 450 PP +++PP Q P HP+ P P Sbjct: 337 PPLSSAPPFQHPQQHHPQLPPP 358 >AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein 49 protein. Length = 283 Score = 29.1 bits (62), Expect = 3.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +1 Query: 391 CAASPPDQQPSTGHPRHPAPDSPYG 465 C A PP ++ S G+P P PD G Sbjct: 95 CPAGPPGEKGSLGNPGQPGPDGVDG 119 >Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical protein F38E11.5 protein. Length = 1000 Score = 28.3 bits (60), Expect = 6.7 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 455 APTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP*P 577 AP E +L+A S P R P+P R P P P P Sbjct: 862 APRQTETQLKAPPPPSVARQPSPVRQPSPIREPSPIREPEP 902 >Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical protein T05A1.2 protein. Length = 300 Score = 28.3 bits (60), Expect = 6.7 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYG 465 PPC A PP + G P P + P G Sbjct: 144 PPCPACPPGPPGAPGAPGKPGSEGPPG 170 >Z50872-5|CAI46559.1| 71|Caenorhabditis elegans Hypothetical protein C05D12.7 protein. Length = 71 Score = 28.3 bits (60), Expect = 6.7 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +2 Query: 359 DTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPT 463 D A+ HLAPP+ +S P P HP + T Sbjct: 21 DAELAIRHGHLAPPNSIPDSPRPQKPTNDHPLSNT 55 >U80954-3|AAK77630.1| 603|Caenorhabditis elegans Defective in germ line developmentprotein 3, isoform b protein. Length = 603 Score = 28.3 bits (60), Expect = 6.7 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +3 Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 254 E S GPS SH R+ ST P + PT PH APP+ H Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533 >U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ line developmentprotein 3, isoform a protein. Length = 977 Score = 28.3 bits (60), Expect = 6.7 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +3 Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETH 254 E S GPS SH R+ ST P + PT PH APP+ H Sbjct: 491 ESSGGPSR---SHTRVSSFSENSSTVPIMQFPT-PHFAPPMLTPHHH 533 >U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein ZK783.1 protein. Length = 2585 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 110 SPSSSQEAPESDITRSVTPLDRVSVNGFPSVKK 12 SP+SS APE T + + D V +G PS K Sbjct: 1293 SPTSSATAPEVPTTSASSTPDAVEESGIPSTSK 1325 >AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical protein C54E4.1 protein. Length = 245 Score = 28.3 bits (60), Expect = 6.7 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 7/51 (13%) Frame = +1 Query: 163 ALKKAREALAPQNDY---RLNPIE---PHH-SDSTKPTXTAQCAPKARRRR 294 A + R +L P D RL+P++ PHH S+STK + T+ +PK R ++ Sbjct: 175 AARLKRLSLTPYPDPQLPRLSPLQQQQPHHRSNSTKKSVTSSVSPKPRTQQ 225 >Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical protein F28D9.1 protein. Length = 601 Score = 27.9 bits (59), Expect = 8.9 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Frame = +2 Query: 272 RRRLAVAGTHPVNRTALHP---RENPAGRRLGDTP*-AVHRSHLAP-PHHRTNSRVPGTP 436 RRR P + + P R +P+ + P A RS P P R + +P Sbjct: 390 RRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSP 449 Query: 437 XTRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP 571 R +P+ + R R + S + P+R +P AP+ +P Sbjct: 450 APRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSP 494 >U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved oligomeric golgi (cog)component protein 5 protein. Length = 580 Score = 27.9 bits (59), Expect = 8.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 627 AGDDSPQGEVSPQHRDEVSPR 689 +G +PQ EVSP + E SPR Sbjct: 86 SGTTTPQSEVSPSKQSEASPR 106 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,861,980 Number of Sequences: 27780 Number of extensions: 457015 Number of successful extensions: 1862 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1834 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1945792630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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