BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_G04 (798 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 35 0.072 At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 32 0.51 At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 32 0.51 At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 31 0.67 At3g49840.1 68416.m05449 proline-rich family protein contains pr... 30 2.0 At3g11385.1 68416.m01386 DC1 domain-containing protein contains ... 30 2.0 At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 30 2.0 At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 2.0 At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 2.0 At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 29 2.7 At1g28200.1 68414.m03461 GRAM domain-containing protein / ABA-re... 29 3.6 At5g25280.2 68418.m02999 serine-rich protein-related contains so... 29 4.7 At5g25280.1 68418.m02998 serine-rich protein-related contains so... 29 4.7 At5g11090.1 68418.m01295 serine-rich protein-related contains so... 29 4.7 At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.7 At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 4.7 At4g24240.1 68417.m03479 WRKY family transcription factor contai... 28 6.2 At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein... 28 6.2 At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 28 8.3 At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 28 8.3 At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 28 8.3 At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 28 8.3 At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 8.3 At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 8.3 >At2g29210.1 68415.m03550 splicing factor PWI domain-containing protein contains Pfam profile PF01480: PWI domain Length = 878 Score = 34.7 bits (76), Expect = 0.072 Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 10/123 (8%) Frame = +3 Query: 123 RGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPV-- 296 R PSPP HR + RS P R P +PP R + R SPSP+ Sbjct: 351 RSPSPPARRHRSPPPARRRRSPSPPARRRRSP--SPPARRRRSPS-PLYRRNRSPSPLYR 407 Query: 297 ------PILLIGRHSIPGKIPQDV--VSETHRERCTGATLRRLTTGPTAEYRAPPXPGTR 452 P+ GR PG+ P V + + R ++ + P R P P R Sbjct: 408 RNRSRSPLAKRGRSDSPGRSPSPVARLRDPTGARLPSPSIEQRLPSPPVAQRLPSPPPRR 467 Query: 453 QPL 461 L Sbjct: 468 AGL 470 Score = 30.3 bits (65), Expect = 1.5 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = +2 Query: 338 PAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRH--PTAPTGDERELRARA-AHSAF 508 P+ RR +P A R +PP R S P P RH PT P R A H + Sbjct: 306 PSRRRRSPSPPARRRRSPSPPARRRRS--PSPPARRHRSPTPPARQRRSPSPPARRHRSP 363 Query: 509 FAVKPKRDPTPFRAPQPHGTP*PGRKTWSWXP 604 + +R P+P + +P P R+ S P Sbjct: 364 PPARRRRSPSPPARRRRSPSP-PARRRRSPSP 394 Score = 29.9 bits (64), Expect = 2.0 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Frame = +2 Query: 338 PAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPTGDEREL---RARAAHSAF 508 PA RR +P A R H +P R P P RH + P R AR S Sbjct: 326 PARRRRSPSPPA--RRHRSPTPPARQRRSPSPPARRHRSPPPARRRRSPSPPARRRRSPS 383 Query: 509 FAVKPKRDPTPF----RAPQP 559 + +R P+P R+P P Sbjct: 384 PPARRRRSPSPLYRRNRSPSP 404 Score = 29.1 bits (62), Expect = 3.6 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +3 Query: 123 RGPSPPPISHRRLRLEKGARSTCPAERLPTKPHR----APPLRLHETHGYRTVRAEGSPS 290 R PSPPP RR G S PA+RLP+ P R P+R+ +H + SPS Sbjct: 459 RLPSPPP---RRA----GLPSPPPAQRLPSPPPRRAGLPSPMRIGGSHAANHLE---SPS 508 Query: 291 PVPILLIGRHSI 326 P + GR + Sbjct: 509 PSSLSPPGRKKV 520 >At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 205 Score = 31.9 bits (69), Expect = 0.51 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHPR-HPAPDSPY 462 PP SPP Q P + +P HP P SPY Sbjct: 45 PPPHFSPPHQPPPSPYPHPHPPPPSPY 71 >At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family protein Length = 846 Score = 31.9 bits (69), Expect = 0.51 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 388 PCAASPPDQQPSTGHPRHPAPDSPYGR 468 P A+SPP P T +P HP P +PY R Sbjct: 742 PTASSPPPP-PETQNPSHPHPHAPYYR 767 >At1g16610.2 68414.m01990 arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana] Length = 407 Score = 31.5 bits (68), Expect = 0.67 Identities = 31/116 (26%), Positives = 43/116 (37%) Frame = +2 Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSA 505 PR PA G +P + P + R+ G+P R P LR R+ Sbjct: 259 PRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP------LRRRSPPPR 312 Query: 506 FFAVKPKRDPTPFRAPQPHGTP*PGRKTWSWXPKNSGPLACGR*QPARRGLSPAPR 673 P+R P R+ P P R + K GP A R + + SP+PR Sbjct: 313 RLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGP-AGRRGRSSSYSSSPSPR 367 >At3g49840.1 68416.m05449 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 606 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHP--RHPAPDSPYGR 468 PP A PP Q P G+P +P P YG+ Sbjct: 512 PPPAGYPPPQYPQAGYPPAGYPPPQQGYGQ 541 >At3g11385.1 68416.m01386 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain Length = 766 Score = 29.9 bits (64), Expect = 2.0 Identities = 23/81 (28%), Positives = 34/81 (41%) Frame = +3 Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSP 293 +K + PSPPP S RR + + RS + +P+ P R R G Sbjct: 107 DKEKVPSPPP-SARRFKRSRNQRSKNMDKEVPSTTPAPRPRRFK-----RHQNQNGKEMD 160 Query: 294 VPILLIGRHSIPGKIPQDVVS 356 I+L+ H P + P+ VS Sbjct: 161 KKIVLLASHHFPTENPRCPVS 181 >At2g25050.1 68415.m02996 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128 Length = 1111 Score = 29.9 bits (64), Expect = 2.0 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +3 Query: 129 PSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVP 299 P PPPIS R + S A + P P PPL+ H + + + P P+P Sbjct: 575 PPPPPISSLRSTPSPSSTSNSIATQGPPPPPPPPPLQSHRS----ALSSSPLPPPLP 627 >At1g49490.1 68414.m05547 leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 847 Score = 29.9 bits (64), Expect = 2.0 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = +2 Query: 395 PPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSAFFAV-KPKRDPTPFRAPQPHGTP 571 PP H TN G P P+ + ++ ++ S + P + PTP ++ P P Sbjct: 640 PPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEP 699 >At1g20130.1 68414.m02518 family II extracellular lipase, putative contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566) Length = 1006 Score = 29.9 bits (64), Expect = 2.0 Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Frame = +2 Query: 425 PGTPX-TRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP*PGRKTWSWX 601 P TP + P AP G + A S + PK P P AP P P P K Sbjct: 3 PPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKP---Q 59 Query: 602 PKNSGPLACGR*QPARRGLSPAP 670 PK P AC P + PAP Sbjct: 60 PKPVPPPACPP-TPPKPQPKPAP 81 >At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein contains Pfam profile: PF01363 FYVE zinc finger Length = 601 Score = 29.5 bits (63), Expect = 2.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = +3 Query: 129 PSPPPISHRRLRLEKGA-RSTCPAERLPTKPHRA-PPLRLHETHGYRTVRAEGS-PSPVP 299 P PPP H + G+ ST P ++ PT H P H+T GY + S P+P P Sbjct: 114 PPPPPTIHPQPLSSYGSFDSTAPYQQ-PTSQHMYYSPYDQHQTSGYSSAPPPSSAPAPNP 172 >At1g28200.1 68414.m03461 GRAM domain-containing protein / ABA-responsive protein-related similar to ABA-responsive protein [Hordeum vulgare] GI:4103635; contains Pfam profile PF02893: GRAM domain Length = 259 Score = 29.1 bits (62), Expect = 3.6 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +2 Query: 491 AAHSAFFAVKPKRDPTPFRAPQPHGTP 571 AAHS+ +A PK DPT P P P Sbjct: 26 AAHSSDYAPYPKLDPTDVTPPPPQPIP 52 >At5g25280.2 68418.m02999 serine-rich protein-related contains some similarity to serine-rich proteins Length = 220 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -2 Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231 G G SY +G RR+ + V +G VE EW Sbjct: 150 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182 >At5g25280.1 68418.m02998 serine-rich protein-related contains some similarity to serine-rich proteins Length = 220 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -2 Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231 G G SY +G RR+ + V +G VE EW Sbjct: 150 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182 >At5g11090.1 68418.m01295 serine-rich protein-related contains some similarity to serine-rich proteins Length = 217 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -2 Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231 G G SY +G RR+ + V +G VE EW Sbjct: 147 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 179 >At3g24550.1 68416.m03083 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain Length = 652 Score = 28.7 bits (61), Expect = 4.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHPRHPAPDSP 459 PP + +PP QPS P P+P SP Sbjct: 69 PPGSLTPPLPQPSPSAPITPSPPSP 93 >At1g59910.1 68414.m06749 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128 Length = 929 Score = 28.7 bits (61), Expect = 4.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +1 Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468 PP AA+PP P P P P P G+ Sbjct: 389 PPSAAAPPPPPPPKKGPAAPPPPPPPGK 416 >At4g24240.1 68417.m03479 WRKY family transcription factor contains Pfam profile: PF03106 WRKY DNA -binding domain Length = 353 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = +3 Query: 207 PTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIPGKIPQDVVSETH 365 PT HR PPL + + + S S P+L G S P VS T+ Sbjct: 148 PTPIHRRPPLSHNNNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATN 200 >At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein contains InterPro accession IPR001199: Cytochrome b5 Length = 121 Score = 28.3 bits (60), Expect = 6.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 615 VL*HAGDDSPQGEVSPQHRDEV 680 +L HAGDDS G PQH V Sbjct: 87 ILDHAGDDSTDGFFGPQHATRV 108 >At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 199 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = +1 Query: 385 PPCAASPPDQ-QPSTGHPRHPAPDSP 459 PP PP Q P +G+P+HP P Sbjct: 145 PPAVGYPPQQGYPPSGYPQHPPQGYP 170 >At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 255 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = +1 Query: 385 PPCAASPPDQ-QPSTGHPRHPAPDSP 459 PP PP Q P +G+P+HP P Sbjct: 201 PPAVGYPPQQGYPPSGYPQHPPQGYP 226 >At4g13350.2 68417.m02088 human Rev interacting-like protein-related / hRIP protein-related similar to SP|P52594 Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein) {Homo sapiens}; contains Pfam profile PF01412: Putative GTPase activating protein for Arf Length = 602 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 168 EKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIP 329 E G+R+ + P +P R + G R EGS SP + +G S P Sbjct: 168 ETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSASPP 221 >At4g13350.1 68417.m02087 human Rev interacting-like protein-related / hRIP protein-related similar to SP|P52594 Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein) {Homo sapiens}; contains Pfam profile PF01412: Putative GTPase activating protein for Arf Length = 602 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 168 EKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIP 329 E G+R+ + P +P R + G R EGS SP + +G S P Sbjct: 168 ETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSASPP 221 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 27.9 bits (59), Expect = 8.3 Identities = 25/98 (25%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Frame = +1 Query: 193 PQNDYRLNPIEPHHSDSTKPTXTAQCAPKARRRRYPSC**DGTPSPGKXXXXXXXXXXXX 372 P+ + P P +S KP Q PK P TP P + Sbjct: 517 PKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETP 576 Query: 373 GAQE-----PPCAASPP-DQQPSTGHP--RHPAPDSPY 462 +E PP PP + P G P P P+ PY Sbjct: 577 KPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPY 614 >At1g26150.1 68414.m03192 protein kinase family protein similar to Pto kinase interactor 1 GI:3668069 from [Lycopersicon esculentum] Length = 760 Score = 27.9 bits (59), Expect = 8.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 388 PCAASPPDQQPSTGHPRHPAPDSP 459 P +SPP + P + P P+P SP Sbjct: 57 PAQSSPPPETPLSSPPPEPSPPSP 80 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,316,468 Number of Sequences: 28952 Number of extensions: 429603 Number of successful extensions: 1616 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1589 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1804564000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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