Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G04
(798 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 35 0.072
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 32 0.51
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 32 0.51
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 31 0.67
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 30 2.0
At3g11385.1 68416.m01386 DC1 domain-containing protein contains ... 30 2.0
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 30 2.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 2.0
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 2.0
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 29 2.7
At1g28200.1 68414.m03461 GRAM domain-containing protein / ABA-re... 29 3.6
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 29 4.7
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 29 4.7
At5g11090.1 68418.m01295 serine-rich protein-related contains so... 29 4.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.7
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 4.7
At4g24240.1 68417.m03479 WRKY family transcription factor contai... 28 6.2
At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein... 28 6.2
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 28 8.3
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 28 8.3
At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 28 8.3
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 28 8.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 8.3
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 8.3
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 34.7 bits (76), Expect = 0.072
Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Frame = +3
Query: 123 RGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPV-- 296
R PSPP HR + RS P R P +PP R + R SPSP+
Sbjct: 351 RSPSPPARRHRSPPPARRRRSPSPPARRRRSP--SPPARRRRSPS-PLYRRNRSPSPLYR 407
Query: 297 ------PILLIGRHSIPGKIPQDV--VSETHRERCTGATLRRLTTGPTAEYRAPPXPGTR 452
P+ GR PG+ P V + + R ++ + P R P P R
Sbjct: 408 RNRSRSPLAKRGRSDSPGRSPSPVARLRDPTGARLPSPSIEQRLPSPPVAQRLPSPPPRR 467
Query: 453 QPL 461
L
Sbjct: 468 AGL 470
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +2
Query: 338 PAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRH--PTAPTGDERELRARA-AHSAF 508
P+ RR +P A R +PP R S P P RH PT P R A H +
Sbjct: 306 PSRRRRSPSPPARRRRSPSPPARRRRS--PSPPARRHRSPTPPARQRRSPSPPARRHRSP 363
Query: 509 FAVKPKRDPTPFRAPQPHGTP*PGRKTWSWXP 604
+ +R P+P + +P P R+ S P
Sbjct: 364 PPARRRRSPSPPARRRRSPSP-PARRRRSPSP 394
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Frame = +2
Query: 338 PAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPTGDEREL---RARAAHSAF 508
PA RR +P A R H +P R P P RH + P R AR S
Sbjct: 326 PARRRRSPSPPA--RRHRSPTPPARQRRSPSPPARRHRSPPPARRRRSPSPPARRRRSPS 383
Query: 509 FAVKPKRDPTPF----RAPQP 559
+ +R P+P R+P P
Sbjct: 384 PPARRRRSPSPLYRRNRSPSP 404
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 123 RGPSPPPISHRRLRLEKGARSTCPAERLPTKPHR----APPLRLHETHGYRTVRAEGSPS 290
R PSPPP RR G S PA+RLP+ P R P+R+ +H + SPS
Sbjct: 459 RLPSPPP---RRA----GLPSPPPAQRLPSPPPRRAGLPSPMRIGGSHAANHLE---SPS 508
Query: 291 PVPILLIGRHSI 326
P + GR +
Sbjct: 509 PSSLSPPGRKKV 520
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPR-HPAPDSPY 462
PP SPP Q P + +P HP P SPY
Sbjct: 45 PPPHFSPPHQPPPSPYPHPHPPPPSPY 71
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 388 PCAASPPDQQPSTGHPRHPAPDSPYGR 468
P A+SPP P T +P HP P +PY R
Sbjct: 742 PTASSPPPP-PETQNPSHPHPHAPYYR 767
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 31.5 bits (68), Expect = 0.67
Identities = 31/116 (26%), Positives = 43/116 (37%)
Frame = +2
Query: 326 PRENPAGRRLGDTP*AVHRSHLAPPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSA 505
PR PA G +P + P + R+ G+P R P LR R+
Sbjct: 259 PRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP------LRRRSPPPR 312
Query: 506 FFAVKPKRDPTPFRAPQPHGTP*PGRKTWSWXPKNSGPLACGR*QPARRGLSPAPR 673
P+R P R+ P P R + K GP A R + + SP+PR
Sbjct: 313 RLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGP-AGRRGRSSSYSSSPSPR 367
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHP--RHPAPDSPYGR 468
PP A PP Q P G+P +P P YG+
Sbjct: 512 PPPAGYPPPQYPQAGYPPAGYPPPQQGYGQ 541
>At3g11385.1 68416.m01386 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 766
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +3
Query: 114 EKSRGPSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSP 293
+K + PSPPP S RR + + RS + +P+ P R R G
Sbjct: 107 DKEKVPSPPP-SARRFKRSRNQRSKNMDKEVPSTTPAPRPRRFK-----RHQNQNGKEMD 160
Query: 294 VPILLIGRHSIPGKIPQDVVS 356
I+L+ H P + P+ VS
Sbjct: 161 KKIVLLASHHFPTENPRCPVS 181
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 129 PSPPPISHRRLRLEKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVP 299
P PPPIS R + S A + P P PPL+ H + + + P P+P
Sbjct: 575 PPPPPISSLRSTPSPSSTSNSIATQGPPPPPPPPPLQSHRS----ALSSSPLPPPLP 627
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PPHHRTNSRVPGTPXTRHPTAPTGDERELRARAAHSAFFAV-KPKRDPTPFRAPQPHGTP 571
PP H TN G P P+ + ++ ++ S + P + PTP ++ P P
Sbjct: 640 PPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEP 699
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 425 PGTPX-TRHPTAPTGDERELRARAAHSAFFAVKPKRDPTPFRAPQPHGTP*PGRKTWSWX 601
P TP + P AP G + A S + PK P P AP P P P K
Sbjct: 3 PPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKP---Q 59
Query: 602 PKNSGPLACGR*QPARRGLSPAP 670
PK P AC P + PAP
Sbjct: 60 PKPVPPPACPP-TPPKPQPKPAP 81
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 129 PSPPPISHRRLRLEKGA-RSTCPAERLPTKPHRA-PPLRLHETHGYRTVRAEGS-PSPVP 299
P PPP H + G+ ST P ++ PT H P H+T GY + S P+P P
Sbjct: 114 PPPPPTIHPQPLSSYGSFDSTAPYQQ-PTSQHMYYSPYDQHQTSGYSSAPPPSSAPAPNP 172
>At1g28200.1 68414.m03461 GRAM domain-containing protein /
ABA-responsive protein-related similar to ABA-responsive
protein [Hordeum vulgare] GI:4103635; contains Pfam
profile PF02893: GRAM domain
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 491 AAHSAFFAVKPKRDPTPFRAPQPHGTP 571
AAHS+ +A PK DPT P P P
Sbjct: 26 AAHSSDYAPYPKLDPTDVTPPPPQPIP 52
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231
G G SY +G RR+ + V +G VE EW
Sbjct: 150 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231
G G SY +G RR+ + V +G VE EW
Sbjct: 150 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182
>At5g11090.1 68418.m01295 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 217
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 329 GDGVPSY*QDGYRRRRAFGAHCAVXVGFVESEW 231
G G SY +G RR+ + V +G VE EW
Sbjct: 147 GQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 179
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSP 459
PP + +PP QPS P P+P SP
Sbjct: 69 PPGSLTPPLPQPSPSAPITPSPPSP 93
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 385 PPCAASPPDQQPSTGHPRHPAPDSPYGR 468
PP AA+PP P P P P P G+
Sbjct: 389 PPSAAAPPPPPPPKKGPAAPPPPPPPGK 416
>At4g24240.1 68417.m03479 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 353
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 207 PTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIPGKIPQDVVSETH 365
PT HR PPL + + + S S P+L G S P VS T+
Sbjct: 148 PTPIHRRPPLSHNNNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATN 200
>At1g60660.1 68414.m06829 cytochrome b5 domain-containing protein
contains InterPro accession IPR001199: Cytochrome b5
Length = 121
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 615 VL*HAGDDSPQGEVSPQHRDEV 680
+L HAGDDS G PQH V
Sbjct: 87 ILDHAGDDSTDGFFGPQHATRV 108
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 385 PPCAASPPDQ-QPSTGHPRHPAPDSP 459
PP PP Q P +G+P+HP P
Sbjct: 145 PPAVGYPPQQGYPPSGYPQHPPQGYP 170
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 385 PPCAASPPDQ-QPSTGHPRHPAPDSP 459
PP PP Q P +G+P+HP P
Sbjct: 201 PPAVGYPPQQGYPPSGYPQHPPQGYP 226
>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 168 EKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIP 329
E G+R+ + P +P R + G R EGS SP + +G S P
Sbjct: 168 ETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSASPP 221
>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 168 EKGARSTCPAERLPTKPHRAPPLRLHETHGYRTVRAEGSPSPVPILLIGRHSIP 329
E G+R+ + P +P R + G R EGS SP + +G S P
Sbjct: 168 ETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSASPP 221
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/98 (25%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Frame = +1
Query: 193 PQNDYRLNPIEPHHSDSTKPTXTAQCAPKARRRRYPSC**DGTPSPGKXXXXXXXXXXXX 372
P+ + P P +S KP Q PK P TP P +
Sbjct: 517 PKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETP 576
Query: 373 GAQE-----PPCAASPP-DQQPSTGHP--RHPAPDSPY 462
+E PP PP + P G P P P+ PY
Sbjct: 577 KPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPY 614
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 388 PCAASPPDQQPSTGHPRHPAPDSP 459
P +SPP + P + P P+P SP
Sbjct: 57 PAQSSPPPETPLSSPPPEPSPPSP 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,316,468
Number of Sequences: 28952
Number of extensions: 429603
Number of successful extensions: 1616
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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