Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_G01
(786 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 159 1e-37
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 149 1e-34
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 135 1e-30
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 135 1e-30
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 133 5e-30
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 130 5e-29
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 127 3e-28
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 124 2e-27
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 124 3e-27
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 122 8e-27
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 122 8e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 120 3e-26
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 116 7e-25
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 116 7e-25
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 103 5e-21
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 98 3e-19
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 90 5e-17
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 90 5e-17
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 85 1e-15
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 79 1e-13
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 79 2e-13
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 75 2e-12
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 73 6e-12
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 71 3e-11
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 71 3e-11
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 71 3e-11
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 69 1e-10
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 68 2e-10
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 67 5e-10
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 65 2e-09
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 61 4e-08
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 60 5e-08
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 58 2e-07
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 56 1e-06
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 55 2e-06
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 55 2e-06
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 52 1e-05
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 51 4e-05
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 49 1e-04
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 46 0.001
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 46 0.001
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 46 0.001
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 45 0.002
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 44 0.003
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 43 0.008
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 43 0.008
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 43 0.008
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 43 0.008
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 43 0.010
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 42 0.023
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 42 0.023
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 42 0.023
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 40 0.053
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 40 0.071
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 40 0.071
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 40 0.071
UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon ... 40 0.093
UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8; Mycoplas... 40 0.093
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 40 0.093
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 40 0.093
UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3; Bacteria... 40 0.093
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 39 0.12
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 39 0.12
UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1; Algoriph... 38 0.29
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 38 0.29
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23; Bactero... 38 0.29
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 38 0.29
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 38 0.38
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 38 0.38
UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidat... 37 0.50
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 37 0.66
UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;... 36 0.87
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.87
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.87
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 36 1.5
UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1... 35 2.0
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95; Bacteri... 35 2.0
UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA... 35 2.7
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 35 2.7
UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1; Chaetosphaer... 35 2.7
UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n... 35 2.7
UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6; Bacteroidete... 34 3.5
UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal pro... 34 3.5
UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 3.5
UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|R... 34 4.6
UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 4.6
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 33 6.1
UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus R... 33 6.1
UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellula... 33 6.1
UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 159 bits (385), Expect = 1e-37
Identities = 66/92 (71%), Positives = 79/92 (85%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
FRE RLL+V DP DHQP+TEASYVN+P IALCNTDSPLR+VDIAIPCN K +HS+GLMW
Sbjct: 116 FREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMW 175
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
W+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 176 WMLAREVLRMRGTISREHPWEVMPDLYFYRDP 207
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 149 bits (360), Expect = 1e-34
Identities = 73/142 (51%), Positives = 87/142 (61%)
Frame = -3
Query: 781 AIXGPR*XXXIXXXPXGXXXCXEVXXAHRXYAYCGTFHTRXFXXTRSKXHFREXRLLIVL 602
AI P + P G + + G F F K FRE RLLIV
Sbjct: 67 AIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKA-FREPRLLIVS 125
Query: 601 DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRL 422
D DHQPITEA+YVNIPVIA CNT+SPLR++D+AIPCN +S+GLMWWLL REVLRL
Sbjct: 126 DARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRL 185
Query: 421 RGVLPRDQRWDVVVDLFFYRXP 356
RG + R+ W+V+ DLFFYR P
Sbjct: 186 RGTISRELPWEVMPDLFFYRDP 207
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 135 bits (327), Expect = 1e-30
Identities = 57/92 (61%), Positives = 70/92 (76%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
FRE RL +V DP DHQP+ EASYVN+P IALCNTDSPL +VDIAIPCN K +HS+G+MW
Sbjct: 196 FREPRLPVVTDPRVDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMW 255
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
W+L EV R+ G + R+ W+V+ D FYR P
Sbjct: 256 WMLVPEVRRISGTISREHPWEVMTDPCFYRDP 287
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 135 bits (326), Expect = 1e-30
Identities = 60/105 (57%), Positives = 74/105 (70%)
Frame = -3
Query: 670 HTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 491
HT + + F E RLLI+ DP DHQPI E + NIP+IA C+TDSP+RFVDI IP
Sbjct: 107 HTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIP 166
Query: 490 CNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
N K HSIG ++WLLAR VL++RG + Q+WDV+VDLFFYR P
Sbjct: 167 ANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREP 211
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 133 bits (321), Expect = 5e-30
Identities = 60/92 (65%), Positives = 70/92 (76%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F + R+L+V DP D Q EAS VNIPVIA C+TD+PL FVDIAIPCN + +SI +M+
Sbjct: 136 FMQPRVLLVTDPRTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMY 195
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
WLLAREVLRLRG +PR WDV VDLFFYR P
Sbjct: 196 WLLAREVLRLRGTIPRSVPWDVKVDLFFYRDP 227
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 130 bits (313), Expect = 5e-29
Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F+E RL+IV DP D Q I EASYVNIPVIAL + DSP FVD+AIPCN + HSIGL+W
Sbjct: 115 FKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIW 174
Query: 451 WLLAREVLRLRGVL-PRDQRWDVVVDLFFYRXP 356
+LLAREVLRLRG L R Q W ++ DL+FYR P
Sbjct: 175 YLLAREVLRLRGALVDRTQPWSIMPDLYFYRDP 207
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -1
Query: 720 VXKXPXHTGXTXIAGRFTPGXF 655
V K HTG T IAGRFTPG F
Sbjct: 86 VLKFAAHTGATPIAGRFTPGSF 107
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 127 bits (307), Expect = 3e-28
Identities = 60/92 (65%), Positives = 70/92 (76%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
+RE RL++V DP D Q I EAS+VNIPVIALC+TDS L VDIAIP N K SIGL+W
Sbjct: 118 YREPRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIW 177
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
+LLAREVLR+RG L R WDV+ DL+FYR P
Sbjct: 178 YLLAREVLRVRGTLSRSAPWDVMPDLYFYRDP 209
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -1
Query: 720 VXKXPXHTGXTXIAGRFTPGXF 655
V K HTG T IAGRFTPG F
Sbjct: 89 VLKFAAHTGATAIAGRFTPGNF 110
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 124 bits (300), Expect = 2e-27
Identities = 55/92 (59%), Positives = 69/92 (75%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F E RLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++
Sbjct: 38 FSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLF 97
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
WLLAR VL++RG + +WDV+VDLFFYR P
Sbjct: 98 WLLARMVLQMRGTILPGHKWDVMVDLFFYRDP 129
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 124 bits (299), Expect = 3e-27
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F E RLL+ DP D Q + E+SYV++PVIALC+TDSPL +VDIAIPCN K SI LM+
Sbjct: 116 FIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMY 175
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
WLLAREVL LR L R WDV+VD FF+R P
Sbjct: 176 WLLAREVLYLRDQLKRWMPWDVLVDTFFWRDP 207
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 122 bits (295), Expect = 8e-27
Identities = 59/106 (55%), Positives = 75/106 (70%)
Frame = -3
Query: 688 AYCGTFHTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF 509
A+ G F F R ++ E RLL+V DP D Q I EASYVNIP I+LCN+D+ L+F
Sbjct: 103 AFPGRFIPGNFT-NRMNPNYCEPRLLLVNDPVVDRQAILEASYVNIPTISLCNSDANLKF 161
Query: 508 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLF 371
+D+AIPCN K+ SIGL++WLLAREVLRL+G + R + WDV DLF
Sbjct: 162 IDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKPDLF 207
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 122 bits (295), Expect = 8e-27
Identities = 56/91 (61%), Positives = 68/91 (74%)
Frame = -3
Query: 634 HFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
+F E RL+IV DP D Q + EA+Y NIP IALC+TD+ L +VD IPCNTK+ +S+GL+
Sbjct: 113 NFCEPRLMIVCDPNTDSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLV 172
Query: 454 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYR 362
WLL REVLRLRG L R Q W V+ DLFFYR
Sbjct: 173 MWLLTREVLRLRGALTRTQEWSVLPDLFFYR 203
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 120 bits (290), Expect = 3e-26
Identities = 56/105 (53%), Positives = 72/105 (68%)
Frame = -3
Query: 670 HTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 491
HT + F E R+L+V DP D QPI+E ++VNIP IA C+TDSPL+ VDIAIP
Sbjct: 126 HTPGTYTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIP 185
Query: 490 CNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
N K+ SIG +++LLAR VL++RG + WDV+VDLFFYR P
Sbjct: 186 ANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYRDP 230
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 116 bits (279), Expect = 7e-25
Identities = 53/90 (58%), Positives = 70/90 (77%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F+E +LLIV DP D Q I EASYVNIPVIAL N+D+PL++VDI IP + + SI +++
Sbjct: 145 FQEPQLLIVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIY 204
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYR 362
WLLAREV LRG L +D+ WDV+VDLF+++
Sbjct: 205 WLLAREVKILRGELNKDEEWDVLVDLFYHK 234
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 116 bits (279), Expect = 7e-25
Identities = 56/90 (62%), Positives = 65/90 (72%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F+E RLLIV DP DHQP+ E S VNIPVI CNTDSPL+ VDI IPCN +SI LM
Sbjct: 116 FKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALML 174
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYR 362
W+LAREV R+ G+ PR Q DV++DLF R
Sbjct: 175 WMLAREVRRIWGLDPRSQPGDVIMDLFLMR 204
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 103 bits (247), Expect = 5e-21
Identities = 48/101 (47%), Positives = 62/101 (61%)
Frame = -3
Query: 670 HTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 491
HT + + F E LLI+ DP DHQPI E + NIP IA C+ DSP+R+VDI I
Sbjct: 54 HTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGNIPTIAFCDIDSPMRYVDIDIL 113
Query: 490 CNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF 368
N K H+IG ++WLL VL +R + +WDV+VDLFF
Sbjct: 114 TNNKGKHNIGCLFWLLTMMVLHMRHTIALGHKWDVMVDLFF 154
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 97.9 bits (233), Expect = 3e-19
Identities = 45/87 (51%), Positives = 61/87 (70%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F E RLLI+ DP D Q + EASYVNIPVI++CNTDS L ++DIAIP N K +S L+
Sbjct: 109 FEEPRLLIISDPLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALII 168
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLF 371
WLL +++L +G L ++ W+V V+ F
Sbjct: 169 WLLTKKILIFKGELTKNCEWNVSVESF 195
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 90.2 bits (214), Expect = 5e-17
Identities = 37/69 (53%), Positives = 55/69 (79%)
Frame = -3
Query: 625 EXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 446
E RLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD AIPCN ++++SI ++W+L
Sbjct: 22 EPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYL 81
Query: 445 LAREVLRLR 419
L + VL ++
Sbjct: 82 LTKAVLEIK 90
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 90.2 bits (214), Expect = 5e-17
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -3
Query: 634 HFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
HF E L++V DP D Q + EA + IPVIALC+TDSP+ VD+ IP N + ++ L+
Sbjct: 116 HFTEADLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALI 175
Query: 454 WWLLAREVLRLRGVLP 407
+WLLAREVLR+RG +P
Sbjct: 176 FWLLAREVLRIRGDIP 191
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = -3
Query: 634 HFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
H + LL+V DP D Q I EAS IPVIAL +TDS F+D+ IPCN K +S+ L+
Sbjct: 119 HHIDIDLLMVADPKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALV 178
Query: 454 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
+WLLAR+VLR RG L ++ D+ V +R P
Sbjct: 179 FWLLARQVLRERGELKPNE--DLPVSWEEFRVP 209
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 79.0 bits (186), Expect = 1e-13
Identities = 34/87 (39%), Positives = 56/87 (64%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
++E +++IV DP D Q + EA + IP+IALC+ ++ FVD+ IP N K S+ +++
Sbjct: 109 YKEVKVIIVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIY 168
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLF 371
WLLARE+L+ RG + ++ +D F
Sbjct: 169 WLLAREILKNRGTITSYDQFKYTIDDF 195
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = -3
Query: 625 EXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 446
E ++L+V DP D Q I EA+ V IP++A +TD+ + ++D+ IP N K S+ L++W
Sbjct: 141 EPKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWA 200
Query: 445 LAREVLRLRGVLPRDQRWDVVVDLFFYR 362
LAR++LR R V+P D V V F R
Sbjct: 201 LARQILRERRVIPPDGDLAVPVSEFEMR 228
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/88 (35%), Positives = 55/88 (62%)
Frame = -3
Query: 634 HFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
++ E ++++ DP D + +A I ++ALC+T+ ++D IP N + S S+ L+
Sbjct: 106 YYMEPEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALI 165
Query: 454 WWLLAREVLRLRGVLPRDQRWDVVVDLF 371
+W+LARE LR RGV+ +D++ V V+ F
Sbjct: 166 YWILAREYLRNRGVIGKDEQLKVPVEEF 193
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -3
Query: 649 TRSKXH-FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSS 473
T + H F E ++IV DPA D Q + EAS + +PV+ALC+T++ VD+ IP N K
Sbjct: 133 TNPQIHGFFEPDVIIVTDPAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGR 192
Query: 472 HSIGLMWWLLAREVLRL 422
++ L++WLLAREV RL
Sbjct: 193 KALSLVYWLLAREVSRL 209
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = -3
Query: 682 CGTFHTRXFXXTRSKXH---FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLR 512
C H R T + + E +LL+V DP D Q +TEA+ IPVI + N+D+
Sbjct: 93 CKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNVTS 152
Query: 511 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLF 371
+D+ IP N + ++ ++WLLAREVL +RG + + +D F
Sbjct: 153 RLDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKYEIDDF 199
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -3
Query: 463 GLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
GL+WWLLAREVLRLRG++PR+ +W+VVVDLFFYR P
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRDP 36
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F E ++ + DP D Q + EA+ + +P++ LC+T+ F+D+ IP N K ++ L++
Sbjct: 110 FMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIY 169
Query: 451 WLLAREVLRLRGVLPRDQR 395
+LL RE L+ RGV+ D +
Sbjct: 170 YLLTREYLKNRGVITDDTK 188
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 68.9 bits (161), Expect = 1e-10
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -3
Query: 472 HSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
HSIGLMWW+L+REVLRLRG + RD W+++VDL+F+R P
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDP 86
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 68.1 bits (159), Expect = 2e-10
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = -3
Query: 481 KSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
K +HS+GL+WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 42
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 449
RE LL++ DP DH + EA YVN+ IAL N+ SPL + IAIP ++K +H++G W
Sbjct: 98 RELCLLLITDPRADHPFLMEAPYVNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVGRRKW 157
Query: 448 LLAREVLRLRG 416
LLA VL G
Sbjct: 158 LLAWGVLHACG 168
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = -3
Query: 625 EXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 446
E +++V DP D Q + EA V IPVIA+C++++ VD+ +P N K ++ +++WL
Sbjct: 184 EPDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWL 243
Query: 445 LAREVLRLRGVLP 407
LA E L RG P
Sbjct: 244 LANETLDRRGAEP 256
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = -3
Query: 625 EXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 446
+ R+LIV D D Q I E+ Y N+P IA NTD+ L VDIAIP N +S +I +++
Sbjct: 123 DPRVLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFI 182
Query: 445 LAREV--LRLRGVLPRDQRWDVVVDLFFYR 362
L+R + ++ L RD + V+LF +R
Sbjct: 183 LSRLINYMKTGAELVRDMK---EVELFLFR 209
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = -3
Query: 583 QPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 404
QP + YVN+P IAL + DS DIA PCN K HS+GLM W+LA E L
Sbjct: 85 QPSLASQYVNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEALSFLNT--H 141
Query: 403 DQRWDVVVDLFFYRXP 356
+ W D++FYR P
Sbjct: 142 EWSWP---DVYFYRDP 154
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = -3
Query: 610 IVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV 431
IV +P D + I E S +NIP+I +CNTD+ + F+D +P NT S S ++++L+ R +
Sbjct: 115 IVAEPKNDPRIIRELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYLIGRLL 174
Query: 430 LR 425
R
Sbjct: 175 KR 176
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = -3
Query: 688 AYCGTFHTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF 509
A G F F K F E RL+IV DP+ DHQ + E+ Y+N+P I N+D+ L+
Sbjct: 109 AVAGRFTPGSFTNQIQKK-FMEPRLIIVSDPSVDHQALRESGYINVPTIGFWNSDNRLKN 167
Query: 508 VDIAIP 491
V IAIP
Sbjct: 168 VGIAIP 173
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3
Query: 454 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 33
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
+LI++DP D I EA +NIPVIAL NT++ + +D IP N S SI L+ +LA
Sbjct: 212 VLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYSVKSITLILGVLAD 271
Query: 436 EVLRLRG 416
+ L G
Sbjct: 272 SIAELHG 278
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 449
R LLIV DP + + EA+ + IPV+ALCNT++ VD IP N S L+
Sbjct: 171 RLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQPQSTCLLMN 230
Query: 448 LLAREVLRLRGV 413
LLA V + +
Sbjct: 231 LLADAVAEAKAM 242
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
+L++ DP ++ +TEA + IPVIALCNT+S + + IP N + S+ L+ LL
Sbjct: 203 VLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGD 262
Query: 436 EVLRLRG 416
V +G
Sbjct: 263 AVALAQG 269
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = -3
Query: 619 RLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 440
+++I+ DP + I EA + IPVIA+CNT++ VD IP N S S+ L+ LL
Sbjct: 264 KVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLC 323
Query: 439 REVLRLRGVLPR 404
V +G LP+
Sbjct: 324 DAVAEAKG-LPK 334
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = -3
Query: 631 FREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 452
F+E R++IV+DP HQ + +A FVDIAIP N + HS+ ++W
Sbjct: 89 FKETRVIIVIDPHVSHQAMHKAL-----------------FVDIAIPGNVRGRHSVVILW 131
Query: 451 WLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
LL R VLRL+G ++ +FFY P
Sbjct: 132 CLLCRTVLRLKG-----GDLSMMPGMFFYHDP 158
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 48.0 bits (109), Expect = 3e-04
Identities = 36/105 (34%), Positives = 48/105 (45%)
Frame = -3
Query: 670 HTRXFXXTRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 491
HT + + F E RLLI+ DP DHQPI E++ P+ L V + +P
Sbjct: 104 HTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPL---------LLSVTLILP 154
Query: 490 CNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 356
C A L +RG + +WDV+VDLFFYR P
Sbjct: 155 C---------------AMSTL-MRGTILPGHKWDVMVDLFFYRDP 183
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
L V+DP ++H + EA + IPVIA+C+T+ +D IP N +S SI ++
Sbjct: 162 LFVVDPKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDTSRSIAII 214
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = -3
Query: 649 TRSKXHFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 470
T++ + L+++L+P ++ I E IP I LC+TD + IPCN S
Sbjct: 364 TKNSNKIIKPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVR 423
Query: 469 SIGLMWWLLAR 437
S+ LM ++++
Sbjct: 424 SVNLMLGIMSK 434
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
LIV+DP D + EA +NIPVI LC+T+ V + IP N S+ +M
Sbjct: 163 LIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
LL+V+D ++H I EA +NIPV+A+ +T+S VD IP N S SI L L A
Sbjct: 164 LLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFAD 223
Query: 436 EVLR 425
L+
Sbjct: 224 AALQ 227
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = -3
Query: 625 EXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWL 446
+ +IV+DP D + EA + +I + ++D+ FVD+ IP N S SI L+ +
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLILTV 235
Query: 445 LAREVLRLRG 416
LA ++ +G
Sbjct: 236 LADAIVNAKG 245
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -3
Query: 607 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 428
V+DP ++ + EA+ + IPV+AL +T+ +D IP N + SI L+ L+A V+
Sbjct: 166 VVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLITRLIADAVI 225
Query: 427 RLRG 416
RG
Sbjct: 226 EGRG 229
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
L+++L+P ++ I E IP I LC+TD + IPCN S + LM +L++
Sbjct: 365 LIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGILSK 424
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
LL+VL+P ++ + EA +P IA+ +TDS V IP N S S+ + +LAR
Sbjct: 319 LLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLAR 378
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
LLIV+DP + + EA + IPV+AL +T+ ++ IPCN S SI L+
Sbjct: 162 LLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLI 215
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 476
LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + IP N S
Sbjct: 164 LLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 440
+ V+D ++H + EA + IPV+A+ +T+S VD AIP N + SI L L+A
Sbjct: 161 MFVVDLPKEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVA 218
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 41.5 bits (93), Expect = 0.023
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 449
R+ +L+V+D ++ + EA +NIP+++L +T+ D+ IP N + SI L+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVG 215
Query: 448 LLA 440
LA
Sbjct: 216 KLA 218
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
+ V+DP ++ + EA+ + IPVIAL +TDS +D +P N + SI L+ +
Sbjct: 161 IFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRVGDL 220
Query: 433 VLRLRG 416
++ RG
Sbjct: 221 LVEARG 226
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 40.3 bits (90), Expect = 0.053
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
++I++DP+++ I+E +NIP I + +T+ + V++ IP N S +I L+ L+
Sbjct: 159 IIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLST 218
Query: 436 EVLRLR 419
+ + +
Sbjct: 219 SIFKAK 224
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 39.9 bits (89), Expect = 0.071
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
LL V+D ++ I EA + IPV+A+ +T+ + VD IP N ++ +I L L++R
Sbjct: 163 LLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCSPKGVDYVIPGNDDAARAIALYCDLVSR 222
Query: 436 EVL 428
L
Sbjct: 223 AAL 225
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 39.9 bits (89), Expect = 0.071
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 449
R ++ ++DP ++ + EA + I +AL +TDS +D+ IP N S+ ++
Sbjct: 156 RLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPIPGNDDGIRSVEMIMR 215
Query: 448 LLAREVLRLRG 416
LA V+ +G
Sbjct: 216 ELADAVIAGKG 226
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 39.9 bits (89), Expect = 0.071
Identities = 17/66 (25%), Positives = 39/66 (59%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
++ ++DP ++ + EA +NIP++A+ +T++ +D+ IP N + ++ L+ +A
Sbjct: 160 VIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMAD 219
Query: 436 EVLRLR 419
V+ R
Sbjct: 220 AVIEGR 225
>UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon
luteolum DSM 273|Rep: Ribosomal protein S2 - Pelodictyon
luteolum (strain DSM 273) (Chlorobium luteolum (strain
DSM273))
Length = 253
Score = 39.5 bits (88), Expect = 0.093
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
L ++D ++H I EA + IP+ A+ +T+ VD IP N + SI LM +A
Sbjct: 161 LFIVDIKKEHIAIKEARSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLMVKAVADT 220
Query: 433 VLRLRGV 413
V+ R +
Sbjct: 221 VVNARAM 227
>UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
agalactiae
Length = 317
Score = 39.5 bits (88), Expect = 0.093
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
+IV DP D + EA + VI + +++S VD IP N S+ SI L+ +LA
Sbjct: 195 MIVADPNVDAIAVKEARSKGVKVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTILADA 254
Query: 433 VLRLRG 416
+ RG
Sbjct: 255 IATARG 260
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 39.5 bits (88), Expect = 0.093
Identities = 18/70 (25%), Positives = 42/70 (60%)
Frame = -3
Query: 634 HFREXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
H + ++++ +++ +TE ++ NIP+I L NT+S + +++ I NTK+ S+ +
Sbjct: 129 HNKINLIILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPIFSNTKNLKSLFFL 188
Query: 454 WWLLAREVLR 425
+L+ + L+
Sbjct: 189 IYLIRKTFLK 198
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 39.5 bits (88), Expect = 0.093
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
L+++L+P ++ EA ++P I + +TD+ R V IP N S L+ LL+R
Sbjct: 182 LMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLIAGLLSR 241
>UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3;
Bacteria|Rep: 30S ribosomal protein S2 - Chlorobium
tepidum
Length = 249
Score = 39.5 bits (88), Expect = 0.093
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
L V+D ++H + EA + IP+ A+ +T+ VD IP N + SI LM +A
Sbjct: 162 LFVVDIKKEHIAVKEARSLGIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLMVKAVADT 221
Query: 433 VLRLR 419
+L R
Sbjct: 222 ILEAR 226
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
+ V+DP ++H ++EA+ + +PV+AL +T++ + IP N + SI L+
Sbjct: 177 IFVIDPNREHIAVSEANRLGVPVVALADTNADPSKIQYIIPGNDDAIRSIKLI 229
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
+ ++D ++H ++EA +NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 161 IFLIDVKKEHIAVSEALKLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1;
Algoriphagus sp. PR1|Rep: 30S ribosomal protein S2 -
Algoriphagus sp. PR1
Length = 253
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
L ++D ++H I EA + IPV AL +T+S V+ IP N + S+ L+
Sbjct: 161 LFIVDIKREHIAIAEAKKLGIPVYALVDTNSNPNEVEFPIPANDDAFKSVSLL 213
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 37.9 bits (84), Expect = 0.29
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 506
+ L+I L+P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 37.9 bits (84), Expect = 0.29
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -3
Query: 586 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 494
+QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 77 YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23;
Bacteroidetes|Rep: 30S ribosomal protein S2 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 281
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
L V+D ++H + EA+ + IPV A+ +T+S +D IP N + +I L+
Sbjct: 161 LFVVDVMKEHIAVREANRLGIPVFAMVDTNSDPSLIDYVIPSNDDALKAIELI 213
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 37.9 bits (84), Expect = 0.29
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = -3
Query: 607 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV 431
V+D ++H + EA +NIPVIA+ +T+ VD IP N + S L+ ++A V
Sbjct: 163 VVDTNKEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAV 221
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
++ V+DP ++H + EA + IPV+A+ +T+ + AIP N S I L+A
Sbjct: 164 IIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLVAD 223
Query: 436 EVL 428
VL
Sbjct: 224 AVL 226
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
L+++DP ++ I EA + I +AL +TD +D+ +P N SI L LA
Sbjct: 165 LVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPVPGNDDGIRSIELFTKHLADA 224
Query: 433 VL 428
VL
Sbjct: 225 VL 226
>UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidatus
Phytoplasma asteris|Rep: 30S ribosomal protein S2 -
Onion yellows phytoplasma
Length = 271
Score = 37.1 bits (82), Expect = 0.50
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
+ V+DP ++ + EA + I V + +T+ VD IP N + + L+ WL+A
Sbjct: 161 IFVVDPEKESIAVAEARKLGIKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLMANA 220
Query: 433 VLR-LRGVLPRDQRWD 389
+ GV + + +D
Sbjct: 221 CVEGTGGVAEKAETFD 236
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 36.7 bits (81), Expect = 0.66
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
L V+D +H I EA+ + IPV A+ +T+S VD IP N + ++ L +A
Sbjct: 161 LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAAT 220
Query: 433 V 431
V
Sbjct: 221 V 221
>UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 136
Score = 36.3 bits (80), Expect = 0.87
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 365 VEEQINHNIPALVTGKHTTKPQHFTCQQPPHQ 460
VE I H++P + TG T Q+F Q PPHQ
Sbjct: 103 VEVGIRHDLPRVFTGNGATHAQNFLSQHPPHQ 134
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.87
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 586 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 494
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.87
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 586 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 494
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 458
+ V+D +TEA+ + +PVIA+ +T+ VD IP N SS ++ L
Sbjct: 160 IFVVDVGYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1;
uncultured marine gamma proteobacterium EBAC20E09|Rep:
Predicted 30S ribosomal protein S2 - uncultured marine
gamma proteobacterium EBAC20E09
Length = 277
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL--- 443
+ V+D + + EA + IP+IAL +T+S +D+ IP N + SI L+ ++
Sbjct: 135 IFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDAIRSIRLITKVISDA 194
Query: 442 -AREVLRLRGVLPR 404
AR + +G +P+
Sbjct: 195 CARGIESAQGFVPK 208
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 229 RYRPACCTRCSSCFWST-PC--SRRMVCPGTR*VEHNCRRTSRRH 104
+ RP CTRC CF+ T C S R + G+ EHNCRR H
Sbjct: 367 KQRPLQCTRCY-CFYDTRACRSSERCISCGSSKQEHNCRRGGAVH 410
>UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95;
Bacteria|Rep: 30S ribosomal protein S2 -
Rhodopseudomonas palustris
Length = 331
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
L+ V+D ++ I EA + IPV A+ +T+ + + +P N + +I L L+AR
Sbjct: 162 LIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVAR 221
Query: 436 EVL 428
V+
Sbjct: 222 AVI 224
>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11321-PA, isoform A - Tribolium castaneum
Length = 2084
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 211 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRR 119
C +CSS F + P RR+VCP + V NCRR
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRR 1818
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
+ V+D ++H + EA+ + IPV+A+ +T+ ++ IP N + SI L +A
Sbjct: 169 IFVIDTKKEHIAVHEANRLGIPVVAVVDTNCDPEGIEYVIPGNDDAIRSIRLFTGKIAEA 228
Query: 433 VLRLR 419
+ R
Sbjct: 229 CIEGR 233
>UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S2 -
Chaetosphaeridium globosum
Length = 191
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF-VDIAIPCNTKSSHSIGLMWWLLAR 437
LIV +P + I EA+ + IPV++L N++ P +D IP N S I L L+ +
Sbjct: 127 LIVFNPCLNFTAIQEANTLGIPVVSLMNSNVPNHLKIDYPIPVNHNSISFIYLFCNLIVK 186
>UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n=2;
Embryophyta|Rep: Chloroplast 30S ribosomal protein S2 -
Marchantia polymorpha (Liverwort)
Length = 235
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
++I++D ++ I E + IP I L +TD DI IP N + SI W+L +
Sbjct: 164 IVIIIDQQKEFTAIQECITLGIPTICLVDTDCDPDMTDIPIPANDDARASIR---WILNK 220
Query: 436 EVLRL 422
L +
Sbjct: 221 LTLAI 225
>UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6;
Bacteroidetes/Chlorobi group|Rep: Ribosomal protein S2 -
Microscilla marina ATCC 23134
Length = 272
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 464
L V+D ++H I EA + IPV A+ +T+S V +P N + SI
Sbjct: 161 LFVVDVKREHIAIAEAHKLGIPVFAMVDTNSNPGAVQFPVPANDDAFKSI 210
>UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal
protein S2; n=7; Eurotiomycetidae|Rep:
Mitochondrial/chloroplast ribosomal protein S2 -
Aspergillus oryzae
Length = 424
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
L++ L+P ++ + E N+P I + +TD+ V IP N S +IG++ +L R
Sbjct: 247 LVVCLNPLENVVLLHECGLNNVPTIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGR 306
>UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n=3;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S2 -
Guillardia theta (Cryptomonas phi)
Length = 235
Score = 34.3 bits (75), Expect = 3.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
L++++D ++ + E + IP+I++ +T+ DIAIP N + SI L+
Sbjct: 159 LVVIVDQKRETTAVQECRTLGIPIISILDTNCNPDLTDIAIPGNDDAIRSIKLI 212
>UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 523
Score = 33.9 bits (74), Expect = 4.6
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 135 STHLVPGQTILLEQGVLQKQELQRVQQAGRYLQPMKPLAPVF 260
S+H V L+E G+ Q + L+RV Q+GR++Q + PLA F
Sbjct: 431 SSHEVALDLSLMEYGIYQ-EALERVLQSGRFVQQVAPLAERF 471
>UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|Rep:
Rps2 protein - Ostreococcus tauri
Length = 226
Score = 33.9 bits (74), Expect = 4.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 455
L++++ + + E +NIP I L +++ FV IP N S+ S+ +
Sbjct: 166 LVVIVGQPNERNAVLECQKLNIPTITLLDSNCDPTFVSYGIPANDDSARSVAFI 219
>UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2;
n=252; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 33.9 bits (74), Expect = 4.6
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 464
++I+LD +++ + E + IP I+L +T+ DI+IP N + SI
Sbjct: 164 IVIILDQQEEYTALRECITLGIPTISLIDTNCNPDLADISIPANDDAIASI 214
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = -3
Query: 628 REXRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 458
R +L+ ++DP +++ + E + IP++A+ +T+ +D IP N + +I L
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKL 212
>UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Ribosomal protein S2 - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 312
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
++ V+D + + EA +++P+I + +T+ +D IP N S +IG +A
Sbjct: 159 VIFVIDIGVEKNAVAEAKKLHLPIIGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREIAN 218
Query: 436 EVLRLR 419
+L +
Sbjct: 219 AILEAK 224
>UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellular
organisms|Rep: 30S ribosomal protein S2 - Xylella
fastidiosa
Length = 266
Score = 33.5 bits (73), Expect = 6.1
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = -3
Query: 613 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLARE 434
+ V+D + I EA + IPV+A+ +T+ VD IP N + ++ L A
Sbjct: 161 IFVIDIGHEDIAIKEAKKLGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADA 220
Query: 433 VLRLRGVLP 407
VL + +P
Sbjct: 221 VLEGKAAMP 229
>UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 398
Score = 33.1 bits (72), Expect = 8.1
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -3
Query: 616 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 437
L++VL+P +++ + E IP I + +T++ + V IP N S S+ ++ +L R
Sbjct: 273 LVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVLGR 332
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,858,143
Number of Sequences: 1657284
Number of extensions: 11919497
Number of successful extensions: 29693
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 28542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29671
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -