Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_F22
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.13 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = -1

Query: 697 RLYPMLCSRSKLSL--RNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRF--CR 530
           R+Y  L ++ KLS+   NK  +  T + P++    +V  H    H K +QV+   +  C 
Sbjct: 167 RIYYKL-TKKKLSVFFGNKPVIL-TVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINCL 224

Query: 529 I-AVGAPWFLR 500
           I  +G  WF++
Sbjct: 225 IYLIGGFWFMQ 235


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 326 LWATSTVYHSVYWVGYVISSGY 391
           L+  +T+   V W GYVI + Y
Sbjct: 277 LFEITTITAMVMWFGYVIDTMY 298


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 326 LWATSTVYHSVYWVGYVISSGY 391
           L+  +T+   V W GYVI + Y
Sbjct: 233 LFEITTITAMVMWFGYVIDTMY 254


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 63  TLVGGLAGLNRRVANTDPSKSSASLNLPPXSETRPTEK 176
           T VG    L    A+     +S  +N+PP     PT+K
Sbjct: 671 THVGNYTCLASNSASVTTYTTSLFINVPPRWILEPTDK 708


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,203
Number of Sequences: 336
Number of extensions: 3494
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)