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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_F22
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    29   3.3  
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152...    29   4.3  
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119...    29   4.3  
11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15...    29   5.7  
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396           29   5.7  
03_06_0233 + 32530174-32530492,32531081-32531127,32531277-325314...    29   5.7  
02_02_0537 + 11308195-11309667                                         29   5.7  
01_05_0645 - 23899579-23904483                                         29   5.7  
10_08_0898 + 21424379-21424792,21424974-21425723                       28   7.6  
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270...    28   7.6  
01_01_0060 + 477667-477816,479312-479722                               28   7.6  

>11_01_0110 +
           850780-850805,851465-851537,851558-851720,851947-852260,
           852330-852409,852506-852848,853068-853166,853240-853360,
           853567-853723,853976-854099,855275-855368,855866-857259,
           857882-857924,858240-858458,859379-859605,859701-859948,
           860246-860552,860725-861153
          Length = 1486

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = -3

Query: 401 PSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 264
           P H + +    RP RPNG P     A   GS   I       +HRS
Sbjct: 59  PRHSAAFSRSLRPCRPNGPPPAFASAEFPGSVPDIAQMPPRRRHRS 104


>06_01_0196 +
           1520015-1520191,1520483-1520527,1521851-1521910,
           1522246-1522358,1522432-1522642,1523087-1523133,
           1523211-1523369,1523521-1523624,1524300-1524634
          Length = 416

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 241 SDGFDEDGDRCLWCLKAP 294
           SDGFDE  D C  CL+ P
Sbjct: 282 SDGFDEGADACAVCLERP 299


>03_03_0042 +
           14009649-14009866,14011342-14011419,14011791-14011955,
           14012071-14012138,14012219-14012258,14013579-14013690,
           14013859-14013942
          Length = 254

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -3

Query: 341 STSPKARHYGSS*SINGAFRHHK-HRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171
           S SP++R++  S S + A R ++ HR   S   SL+  G      HR +  S SPD L
Sbjct: 168 SRSPRSRYHSYSPSPSPARRDYRDHRDDYSPGESLSPHGQDKR-HHRSNGRSASPDEL 224


>11_01_0022 +
           151233-151515,152632-152852,153579-153656,154558-154674,
           155970-156316,156504-157032
          Length = 524

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 551 NLKGFQVGAGCVSEHYACVR 610
           N   +QVG GC+S+ Y C+R
Sbjct: 348 NATNYQVGTGCLSDIYFCLR 367


>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
          Length = 1357

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 341  STSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171
            ST P +       +IN   +   H  PSSS     T   T  + H H P SF P  +
Sbjct: 973  STDPASSMVAFHININNLLQSFPHNKPSSSTKRHDTIPQTPYILHNH-PNSFLPQYI 1028


>03_06_0233 +
           32530174-32530492,32531081-32531127,32531277-32531413,
           32531673-32531841,32532598-32532885,32533021-32533107,
           32533454-32534152,32534244-32534735
          Length = 745

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -3

Query: 374 HTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 219
           H+     NG PS+  K R  GSS  ++ +F+   ++   S N +L++  +T+
Sbjct: 519 HSLDPELNGSPSSKDKLRKDGSSKLLSHSFKDLGNKDIRSDNVALSSVAATT 570


>02_02_0537 + 11308195-11309667
          Length = 490

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 341 STSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171
           ST P +       +IN   +   H  PSSS     T   T  + H H P SF P  +
Sbjct: 131 STDPASSMVAFHININNLLQSFPHNKPSSSTKRHDTIPQTPYILHNH-PNSFLPQYI 186


>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 341  STSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171
            ST P +       +IN   +   H  PSSS     T   T  + H H P SF P  +
Sbjct: 1250 STDPASSMVAFHININNLLQSFPHNKPSSSTKRHDTIPQTPYILHNH-PNSFLPQYI 1305


>10_08_0898 + 21424379-21424792,21424974-21425723
          Length = 387

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 281 HHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPD 177
           HH H       PS AT  +TS   H+ S LSF+ D
Sbjct: 101 HHHHHIGGMGEPSGATPSATSS-DHQTSMLSFADD 134


>04_04_1093 +
           30825722-30826168,30826457-30826608,30826926-30827048,
           30827240-30827384,30828032-30828093,30828373-30828586,
           30829671-30830585,30830827-30831076,30831164-30831432
          Length = 858

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = -3

Query: 371 TRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSS---NPSLATKGSTSELTHRH 201
           T P  P+  PS+ P  RH   S +  G  R  +  SPS S    PS +   S S  T   
Sbjct: 5   TAPPPPSSPPSSPPPLRH---SPAALGTPRSRRRHSPSPSLALTPSSSASASASASTSSR 61

Query: 200 SPLSFSP 180
             +  SP
Sbjct: 62  PKVRPSP 68


>01_01_0060 + 477667-477816,479312-479722
          Length = 186

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 284 RHHKHRS-PSSSNPSLATKGSTSELTHRHSPLSFSPDL 174
           RHH H S  SSS+P  +TK + ++L H     ++   L
Sbjct: 32  RHHHHYSTSSSSSPPSSTKEAVTQLDHLEQAAAYIKQL 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,572,888
Number of Sequences: 37544
Number of extensions: 470928
Number of successful extensions: 1235
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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